Fix and uniform the usage of Graph and Parent typedefs (#268)

- Rename Graph typedefs to GraphType in the implementation of graph
maps and MapExtender to prevent conflicts (especially using VS).
They are not public.
- Make Parent typedefs private in all classes.
- Replace Digraph with Graph in some places
(fix faulty renamings of the script).
- Use Graph and Digraph typedefs (more) consequently.

 prefix=@prefix@

 exec_prefix=@exec_prefix@

 libdir=@libdir@

 includedir=@includedir@

 Name: @PACKAGE_NAME@

 Description: Library of Efficient Models and Optimization in Networks

 Version: @PACKAGE_VERSION@

 Libs: -L${libdir} -lemon

 Cflags: -I${includedir}