lemon/vf2pp.h
author Balazs Dezso <deba@google.com>
Fri, 22 Jan 2021 10:55:32 +0100
changeset 1208 c6aa2cc1af04
parent 1194 e68f0ef37e77
permissions -rw-r--r--
Factor out recursion from weighted matching algorithms (#638)
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/* -*- mode: C++; indent-tabs-mode: nil; -*-
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 *
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 * This file is a part of LEMON, a generic C++ optimization library.
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 *
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 * Copyright (C) 2015-2017
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 * EMAXA Kutato-fejleszto Kft. (EMAXA Research Ltd.)
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 *
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 * Permission to use, modify and distribute this software is granted
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 * provided that this copyright notice appears in all copies. For
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 * precise terms see the accompanying LICENSE file.
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 *
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 * This software is provided "AS IS" with no warranty of any kind,
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 * express or implied, and with no claim as to its suitability for any
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 * purpose.
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 *
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 */
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#ifndef LEMON_VF2PP_H
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#define LEMON_VF2PP_H
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///\ingroup graph_properties
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///\file
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///\brief VF2 Plus Plus algorithm.
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#include <lemon/core.h>
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#include <lemon/concepts/graph.h>
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#include <lemon/bits/vf2_internals.h>
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#include <vector>
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#include <algorithm>
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#include <utility>
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namespace lemon {
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  ///%VF2 Plus Plus algorithm class \cite VF2PP.
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  ///\ingroup graph_isomorphism This class provides an efficient
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  ///implementation of the %VF2 Plus Plus algorithm \cite VF2PP
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  ///for variants of the (Sub)graph Isomorphism problem.
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  ///
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  ///There is also a \ref vf2pp() "function-type interface" called
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  ///\ref vf2pp() for the %VF2 Plus Plus algorithm, which is probably
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  ///more convenient in most use cases.
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  ///
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  ///\tparam G1 The type of the graph to be embedded.
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  ///The default type is \ref ListGraph.
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  ///\tparam G2 The type of the graph g1 will be embedded into.
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  ///The default type is \ref ListGraph.
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  ///\tparam M The type of the NodeMap storing the mapping.
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  ///By default, it is G1::NodeMap<G2::Node>
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  ///\tparam M1 The type of the NodeMap storing the integer node labels of G1.
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  ///The labels must be the numbers {0,1,2,..,K-1}, where K is the number of
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  ///different labels. By default, it is G1::NodeMap<int>.
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  ///\tparam M2 The type of the NodeMap storing the integer node labels of G2.
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  ///The labels must be the numbers {0,1,2,..,K-1}, where K is the number of
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  ///different labels. By default, it is G2::NodeMap<int>.
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  ///
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  ///\sa vf2pp()
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#ifdef DOXYGEN
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  template<class G1, class G2, class M, class M1, class M2 >
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#else
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  template<class G1 = ListGraph,
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           class G2 = ListGraph,
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           class M = typename G1::template NodeMap<G2::Node>,
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           class M1 = typename G1::template NodeMap<int>,
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           class M2 = typename G2::template NodeMap<int> >
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#endif
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  class Vf2pp {
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    //The graph to be embedded
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    const G1 &_g1;
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    //The graph into which g1 is to be embedded
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    const G2 &_g2;
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    //Current depth in the search tree
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    int _depth;
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    //The current mapping. _mapping[v1]=v2 iff v1 has been mapped to v2,
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    //where v1 is a node of G1 and v2 is a node of G2
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    M &_mapping;
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    //_order[i] is a node of g1 for which a pair is searched if depth=i
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    std::vector<typename G1::Node> _order;
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    //_conn[v2] = number of covered neighbours of v2
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    typename G2::template NodeMap<int> _conn;
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    //_currEdgeIts[i] is the last used edge iterator in the i-th
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    //depth to find a pair for node _order[i]
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    std::vector<typename G2::IncEdgeIt> _currEdgeIts;
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    //_rNewLabels1[v] is a pair of form
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    //(label; num. of uncov. nodes with such label and no covered neighbours)
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    typename G1::template NodeMap<std::vector<std::pair<int,int> > >
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    _rNewLabels1;
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    //_rInOutLabels1[v] is the number of covered neighbours of v for each label
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    //in form (label,number of such labels)
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    typename G1::template NodeMap<std::vector<std::pair<int,int> > >
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    _rInOutLabels1;
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    //_intLabels1[v]==i means that node v has label i in _g1
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    //(i is in {0,1,2,..,K-1}, where K is the number of diff. labels)
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    M1 &_intLabels1;
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    //_intLabels2[v]==i means that node v has label i in _g2
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    //(i is in {0,1,2,..,K-1}, where K is the number of diff. labels)
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    M2 &_intLabels2;
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    //largest label
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    const int _maxLabel;
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    //lookup tables for manipulating with label class cardinalities
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    //(after use they have to be reset to 0..0)
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    std::vector<int> _labelTmp1,_labelTmp2;
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    MappingType _mapping_type;
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    //indicates whether the mapping or the labels must be deleted in the destructor
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    bool _deallocMappingAfterUse,_deallocLabelsAfterUse;
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    //improved cutting function
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    template<MappingType MT>
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    bool cutByLabels(const typename G1::Node n1,const typename G2::Node n2) {
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      for(typename G2::IncEdgeIt e2(_g2,n2); e2!=INVALID; ++e2) {
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        const typename G2::Node currNode=_g2.oppositeNode(n2,e2);
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        if(_conn[currNode]>0)
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          --_labelTmp1[_intLabels2[currNode]];
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        else if(MT!=SUBGRAPH&&_conn[currNode]==0)
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          --_labelTmp2[_intLabels2[currNode]];
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      }
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      bool ret=1;
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      if(ret) {
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        for(unsigned int i = 0; i < _rInOutLabels1[n1].size(); ++i)
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          _labelTmp1[_rInOutLabels1[n1][i].first]+=_rInOutLabels1[n1][i].second;
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        if(MT!=SUBGRAPH)
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          for(unsigned int i = 0; i < _rNewLabels1[n1].size(); ++i)
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            _labelTmp2[_rNewLabels1[n1][i].first]+=_rNewLabels1[n1][i].second;
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        switch(MT) {
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        case INDUCED:
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          for(unsigned int i = 0; i < _rInOutLabels1[n1].size(); ++i)
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            if(_labelTmp1[_rInOutLabels1[n1][i].first]>0) {
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              ret=0;
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              break;
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            }
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          if(ret)
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            for(unsigned int i = 0; i < _rNewLabels1[n1].size(); ++i)
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              if(_labelTmp2[_rNewLabels1[n1][i].first]>0) {
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                ret=0;
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                break;
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              }
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          break;
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        case SUBGRAPH:
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          for(unsigned int i = 0; i < _rInOutLabels1[n1].size(); ++i)
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            if(_labelTmp1[_rInOutLabels1[n1][i].first]>0) {
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              ret=0;
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              break;
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            }
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          break;
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        case ISOMORPH:
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          for(unsigned int i = 0; i < _rInOutLabels1[n1].size(); ++i)
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            if(_labelTmp1[_rInOutLabels1[n1][i].first]!=0) {
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              ret=0;
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              break;
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            }
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          if(ret)
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            for(unsigned int i = 0; i < _rNewLabels1[n1].size(); ++i)
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              if(_labelTmp2[_rNewLabels1[n1][i].first]!=0) {
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                ret=0;
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                break;
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              }
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          break;
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        default:
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          return false;
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        }
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        for(unsigned int i = 0; i < _rInOutLabels1[n1].size(); ++i)
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          _labelTmp1[_rInOutLabels1[n1][i].first]=0;
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        if(MT!=SUBGRAPH)
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          for(unsigned int i = 0; i < _rNewLabels1[n1].size(); ++i)
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            _labelTmp2[_rNewLabels1[n1][i].first]=0;
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      }
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      for(typename G2::IncEdgeIt e2(_g2,n2); e2!=INVALID; ++e2) {
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        const typename G2::Node currNode=_g2.oppositeNode(n2,e2);
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        _labelTmp1[_intLabels2[currNode]]=0;
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        if(MT!=SUBGRAPH&&_conn[currNode]==0)
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          _labelTmp2[_intLabels2[currNode]]=0;
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      }
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      return ret;
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    }
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    //try to exclude the matching of n1 and n2
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    template<MappingType MT>
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    bool feas(const typename G1::Node n1,const typename G2::Node n2) {
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      if(_intLabels1[n1]!=_intLabels2[n2])
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        return 0;
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      for(typename G1::IncEdgeIt e1(_g1,n1); e1!=INVALID; ++e1) {
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        const typename G1::Node& currNode=_g1.oppositeNode(n1,e1);
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        if(_mapping[currNode]!=INVALID)
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          --_conn[_mapping[currNode]];
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      }
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      bool isIso=1;
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      for(typename G2::IncEdgeIt e2(_g2,n2); e2!=INVALID; ++e2) {
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        int& connCurrNode = _conn[_g2.oppositeNode(n2,e2)];
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        if(connCurrNode<-1)
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          ++connCurrNode;
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        else if(MT!=SUBGRAPH&&connCurrNode==-1) {
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          isIso=0;
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          break;
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        }
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      }
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      if(isIso)
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        for(typename G1::IncEdgeIt e1(_g1,n1); e1!=INVALID; ++e1) {
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          const typename G2::Node& currNodePair =
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            _mapping[_g1.oppositeNode(n1,e1)];
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          int& connCurrNodePair=_conn[currNodePair];
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          if(currNodePair!=INVALID&&connCurrNodePair!=-1) {
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            switch(MT){
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            case INDUCED:
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            case ISOMORPH:
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              isIso=0;
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              break;
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            case SUBGRAPH:
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              if(connCurrNodePair<-1)
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                isIso=0;
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              break;
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            }
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            connCurrNodePair=-1;
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          }
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        }
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      else
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        for(typename G1::IncEdgeIt e1(_g1,n1); e1!=INVALID; ++e1) {
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          const typename G2::Node currNode=_mapping[_g1.oppositeNode(n1,e1)];
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          if(currNode!=INVALID/*&&_conn[currNode]!=-1*/)
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            _conn[currNode]=-1;
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        }
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      return isIso&&cutByLabels<MT>(n1,n2);
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    }
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    //maps n1 to n2
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    void addPair(const typename G1::Node n1,const typename G2::Node n2) {
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      _conn[n2]=-1;
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      _mapping.set(n1,n2);
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      for(typename G2::IncEdgeIt e2(_g2,n2); e2!=INVALID; ++e2) {
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        int& currConn = _conn[_g2.oppositeNode(n2,e2)];
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        if(currConn!=-1)
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          ++currConn;
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      }
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    }
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    //removes mapping of n1 to n2
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    void subPair(const typename G1::Node n1,const typename G2::Node n2) {
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      _conn[n2]=0;
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      _mapping.set(n1,INVALID);
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      for(typename G2::IncEdgeIt e2(_g2,n2); e2!=INVALID; ++e2){
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        int& currConn = _conn[_g2.oppositeNode(n2,e2)];
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        if(currConn>0)
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          --currConn;
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        else if(currConn==-1)
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          ++_conn[n2];
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      }
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    }
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    void processBfsTree(typename G1::Node source,unsigned int& orderIndex,
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                         typename G1::template NodeMap<int>& dm1,
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                         typename G1::template NodeMap<bool>& added) {
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      _order[orderIndex]=source;
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      added[source]=1;
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      unsigned int endPosOfLevel=orderIndex,
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        startPosOfLevel=orderIndex,
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        lastAdded=orderIndex;
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      typename G1::template NodeMap<int> currConn(_g1,0);
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      while(orderIndex<=lastAdded){
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        typename G1::Node currNode = _order[orderIndex];
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        for(typename G1::IncEdgeIt e(_g1,currNode); e!=INVALID; ++e) {
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          typename G1::Node n = _g1.oppositeNode(currNode,e);
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          if(!added[n]) {
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            _order[++lastAdded]=n;
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            added[n]=1;
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          }
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        }
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        if(orderIndex>endPosOfLevel){
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          for(unsigned int j = startPosOfLevel; j <= endPosOfLevel; ++j) {
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            int minInd=j;
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            for(unsigned int i = j+1; i <= endPosOfLevel; ++i)
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              if(currConn[_order[i]]>currConn[_order[minInd]]||
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                 (currConn[_order[i]]==currConn[_order[minInd]]&&
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                  (dm1[_order[i]]>dm1[_order[minInd]]||
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                   (dm1[_order[i]]==dm1[_order[minInd]]&&
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                    _labelTmp1[_intLabels1[_order[minInd]]]>
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                    _labelTmp1[_intLabels1[_order[i]]]))))
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                minInd=i;
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            --_labelTmp1[_intLabels1[_order[minInd]]];
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            for(typename G1::IncEdgeIt e(_g1,_order[minInd]); e!=INVALID; ++e)
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              ++currConn[_g1.oppositeNode(_order[minInd],e)];
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            std::swap(_order[j],_order[minInd]);
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          }
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          startPosOfLevel=endPosOfLevel+1;
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          endPosOfLevel=lastAdded;
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        }
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        ++orderIndex;
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      }
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    }
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    //we will find pairs for the nodes of g1 in this order
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    void initOrder(){
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      for(typename G2::NodeIt n2(_g2); n2!=INVALID; ++n2)
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        ++_labelTmp1[_intLabels2[n2]];
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      typename G1::template NodeMap<int> dm1(_g1,0);
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      for(typename G1::EdgeIt e(_g1); e!=INVALID; ++e) {
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        ++dm1[_g1.u(e)];
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        ++dm1[_g1.v(e)];
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      }
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      typename G1::template NodeMap<bool> added(_g1,0);
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      unsigned int orderIndex=0;
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madarasip@1186
   335
      for(typename G1::NodeIt n(_g1); n!=INVALID;) {
madarasip@1186
   336
        if(!added[n]){
madarasip@1186
   337
          typename G1::Node minNode = n;
madarasip@1186
   338
          for(typename G1::NodeIt n1(_g1,minNode); n1!=INVALID; ++n1)
madarasip@1186
   339
            if(!added[n1] &&
kpeter@1189
   340
               (_labelTmp1[_intLabels1[minNode]]>
kpeter@1189
   341
                _labelTmp1[_intLabels1[n1]]||(dm1[minNode]<dm1[n1]&&
kpeter@1189
   342
                                             _labelTmp1[_intLabels1[minNode]]==
kpeter@1189
   343
                                             _labelTmp1[_intLabels1[n1]])))
madarasip@1186
   344
              minNode=n1;
kpeter@1193
   345
          processBfsTree(minNode,orderIndex,dm1,added);
madarasip@1186
   346
        }
madarasip@1186
   347
        else
madarasip@1186
   348
          ++n;
madarasip@1186
   349
      }
kpeter@1189
   350
      for(unsigned int i = 0; i < _labelTmp1.size(); ++i)
kpeter@1189
   351
        _labelTmp1[i]=0;
madarasip@1186
   352
    }
madarasip@1186
   353
madarasip@1186
   354
madarasip@1186
   355
    template<MappingType MT>
madarasip@1186
   356
    bool extMatch(){
madarasip@1186
   357
      while(_depth>=0) {
kpeter@1189
   358
        if(_depth==static_cast<int>(_order.size())) {
kpeter@1188
   359
          //all nodes of g1 are mapped to nodes of g2
madarasip@1186
   360
          --_depth;
madarasip@1186
   361
          return true;
madarasip@1186
   362
        }
kpeter@1189
   363
        typename G1::Node& nodeOfDepth = _order[_depth];
madarasip@1186
   364
        const typename G2::Node& pairOfNodeOfDepth = _mapping[nodeOfDepth];
kpeter@1189
   365
        typename G2::IncEdgeIt &edgeItOfDepth = _currEdgeIts[_depth];
kpeter@1188
   366
        //the node of g2 whose neighbours are the candidates for
kpeter@1189
   367
        //the pair of _order[_depth]
madarasip@1186
   368
        typename G2::Node currPNode;
madarasip@1186
   369
        if(edgeItOfDepth==INVALID){
madarasip@1186
   370
          typename G1::IncEdgeIt fstMatchedE(_g1,nodeOfDepth);
kpeter@1189
   371
          //if _mapping[_order[_depth]]!=INVALID, we don't need fstMatchedE
kpeter@1188
   372
          if(pairOfNodeOfDepth==INVALID) {
madarasip@1186
   373
            for(; fstMatchedE!=INVALID &&
madarasip@1186
   374
                  _mapping[_g1.oppositeNode(nodeOfDepth,
madarasip@1186
   375
                                            fstMatchedE)]==INVALID;
madarasip@1186
   376
                ++fstMatchedE); //find fstMatchedE, it could be preprocessed
kpeter@1188
   377
          }
madarasip@1186
   378
          if(fstMatchedE==INVALID||pairOfNodeOfDepth!=INVALID) {
kpeter@1188
   379
            //We found no covered neighbours, this means that
kpeter@1188
   380
            //the graph is not connected (or _depth==0). Each
kpeter@1188
   381
            //uncovered (and there are some other properties due
madarasip@1186
   382
            //to the spec. problem types) node of g2 is
kpeter@1188
   383
            //candidate. We can read the iterator of the last
madarasip@1186
   384
            //tried node from the match if it is not the first
kpeter@1188
   385
            //try (match[nodeOfDepth]!=INVALID)
madarasip@1186
   386
            typename G2::NodeIt n2(_g2);
madarasip@1186
   387
            //if it's not the first try
madarasip@1186
   388
            if(pairOfNodeOfDepth!=INVALID) {
madarasip@1186
   389
              n2=++typename G2::NodeIt(_g2,pairOfNodeOfDepth);
madarasip@1186
   390
              subPair(nodeOfDepth,pairOfNodeOfDepth);
madarasip@1186
   391
            }
madarasip@1186
   392
            for(; n2!=INVALID; ++n2)
madarasip@1186
   393
              if(MT!=SUBGRAPH) {
madarasip@1186
   394
                if(_conn[n2]==0&&feas<MT>(nodeOfDepth,n2))
madarasip@1186
   395
                  break;
madarasip@1186
   396
              }
madarasip@1186
   397
              else if(_conn[n2]>=0&&feas<MT>(nodeOfDepth,n2))
madarasip@1186
   398
                break;
madarasip@1186
   399
            // n2 is the next candidate
madarasip@1186
   400
            if(n2!=INVALID) {
madarasip@1186
   401
              addPair(nodeOfDepth,n2);
madarasip@1186
   402
              ++_depth;
madarasip@1186
   403
            }
madarasip@1186
   404
            else // there are no more candidates
madarasip@1186
   405
              --_depth;
madarasip@1186
   406
            continue;
madarasip@1186
   407
          }
kpeter@1188
   408
          else {
madarasip@1186
   409
            currPNode=_mapping[_g1.oppositeNode(nodeOfDepth,
madarasip@1186
   410
                                                fstMatchedE)];
madarasip@1186
   411
            edgeItOfDepth=typename G2::IncEdgeIt(_g2,currPNode);
madarasip@1186
   412
          }
madarasip@1186
   413
        }
kpeter@1188
   414
        else {
madarasip@1186
   415
          currPNode=_g2.oppositeNode(pairOfNodeOfDepth,
madarasip@1186
   416
                                     edgeItOfDepth);
madarasip@1186
   417
          subPair(nodeOfDepth,pairOfNodeOfDepth);
madarasip@1186
   418
          ++edgeItOfDepth;
madarasip@1186
   419
        }
madarasip@1186
   420
        for(; edgeItOfDepth!=INVALID; ++edgeItOfDepth) {
madarasip@1186
   421
          const typename G2::Node currNode =
madarasip@1186
   422
            _g2.oppositeNode(currPNode, edgeItOfDepth);
madarasip@1186
   423
          if(_conn[currNode]>0&&feas<MT>(nodeOfDepth,currNode)) {
madarasip@1186
   424
            addPair(nodeOfDepth,currNode);
madarasip@1186
   425
            break;
madarasip@1186
   426
          }
madarasip@1186
   427
        }
madarasip@1186
   428
        edgeItOfDepth==INVALID?--_depth:++_depth;
madarasip@1186
   429
      }
madarasip@1186
   430
      return false;
madarasip@1186
   431
    }
madarasip@1186
   432
kpeter@1188
   433
    //calculate the lookup table for cutting the search tree
kpeter@1190
   434
    void initRNew1tRInOut1t(){
madarasip@1186
   435
      typename G1::template NodeMap<int> tmp(_g1,0);
kpeter@1189
   436
      for(unsigned int i=0; i<_order.size(); ++i) {
kpeter@1189
   437
        tmp[_order[i]]=-1;
kpeter@1189
   438
        for(typename G1::IncEdgeIt e1(_g1,_order[i]); e1!=INVALID; ++e1) {
kpeter@1189
   439
          const typename G1::Node currNode=_g1.oppositeNode(_order[i],e1);
madarasip@1186
   440
          if(tmp[currNode]>0)
kpeter@1189
   441
            ++_labelTmp1[_intLabels1[currNode]];
madarasip@1186
   442
          else if(tmp[currNode]==0)
kpeter@1189
   443
            ++_labelTmp2[_intLabels1[currNode]];
madarasip@1186
   444
        }
kpeter@1189
   445
        //_labelTmp1[i]=number of neightbours with label i in set rInOut
kpeter@1189
   446
        //_labelTmp2[i]=number of neightbours with label i in set rNew
kpeter@1189
   447
        for(typename G1::IncEdgeIt e1(_g1,_order[i]); e1!=INVALID; ++e1) {
kpeter@1189
   448
          const int& currIntLabel = _intLabels1[_g1.oppositeNode(_order[i],e1)];
kpeter@1189
   449
          if(_labelTmp1[currIntLabel]>0) {
kpeter@1189
   450
            _rInOutLabels1[_order[i]]
madarasip@1186
   451
              .push_back(std::make_pair(currIntLabel,
kpeter@1189
   452
                                        _labelTmp1[currIntLabel]));
kpeter@1189
   453
            _labelTmp1[currIntLabel]=0;
madarasip@1186
   454
          }
kpeter@1189
   455
          else if(_labelTmp2[currIntLabel]>0) {
kpeter@1189
   456
            _rNewLabels1[_order[i]].
kpeter@1189
   457
              push_back(std::make_pair(currIntLabel,_labelTmp2[currIntLabel]));
kpeter@1189
   458
            _labelTmp2[currIntLabel]=0;
madarasip@1186
   459
          }
madarasip@1186
   460
        }
madarasip@1186
   461
kpeter@1189
   462
        for(typename G1::IncEdgeIt e1(_g1,_order[i]); e1!=INVALID; ++e1) {
kpeter@1189
   463
          int& tmpCurrNode=tmp[_g1.oppositeNode(_order[i],e1)];
madarasip@1186
   464
          if(tmpCurrNode!=-1)
madarasip@1186
   465
            ++tmpCurrNode;
madarasip@1186
   466
        }
madarasip@1186
   467
      }
madarasip@1186
   468
    }
madarasip@1186
   469
madarasip@1186
   470
    int getMaxLabel() const{
madarasip@1186
   471
      int m=-1;
madarasip@1186
   472
      for(typename G1::NodeIt n1(_g1); n1!=INVALID; ++n1) {
madarasip@1186
   473
        const int& currIntLabel = _intLabels1[n1];
madarasip@1186
   474
        if(currIntLabel>m)
madarasip@1186
   475
          m=currIntLabel;
madarasip@1186
   476
      }
madarasip@1186
   477
      for(typename G2::NodeIt n2(_g2); n2!=INVALID; ++n2) {
madarasip@1186
   478
        const int& currIntLabel = _intLabels2[n2];
madarasip@1186
   479
        if(currIntLabel>m)
madarasip@1186
   480
          m=currIntLabel;
madarasip@1186
   481
      }
madarasip@1186
   482
      return m;
madarasip@1186
   483
    }
madarasip@1186
   484
madarasip@1186
   485
  public:
madarasip@1186
   486
    ///Constructor
madarasip@1186
   487
madarasip@1186
   488
    ///Constructor.
madarasip@1186
   489
    ///\param g1 The graph to be embedded.
madarasip@1186
   490
    ///\param g2 The graph \e g1 will be embedded into.
madarasip@1186
   491
    ///\param m The type of the NodeMap storing the mapping.
madarasip@1186
   492
    ///By default, it is G1::NodeMap<G2::Node>
madarasip@1186
   493
    ///\param intLabel1 The NodeMap storing the integer node labels of G1.
madarasip@1186
   494
    ///The labels must be the numbers {0,1,2,..,K-1}, where K is the number of
madarasip@1186
   495
    ///different labels.
madarasip@1186
   496
    ///\param intLabel1 The NodeMap storing the integer node labels of G2.
madarasip@1186
   497
    ///The labels must be the numbers {0,1,2,..,K-1}, where K is the number of
madarasip@1186
   498
    ///different labels.
madarasip@1186
   499
    Vf2pp(const G1 &g1, const G2 &g2,M &m, M1 &intLabels1, M2 &intLabels2) :
kpeter@1189
   500
      _g1(g1), _g2(g2), _depth(0), _mapping(m), _order(countNodes(g1),INVALID),
kpeter@1189
   501
      _conn(g2,0), _currEdgeIts(countNodes(g1),INVALID), _rNewLabels1(_g1),
kpeter@1189
   502
      _rInOutLabels1(_g1), _intLabels1(intLabels1) ,_intLabels2(intLabels2),
kpeter@1189
   503
      _maxLabel(getMaxLabel()), _labelTmp1(_maxLabel+1),_labelTmp2(_maxLabel+1),
madarasip@1186
   504
      _mapping_type(SUBGRAPH), _deallocMappingAfterUse(0),
madarasip@1186
   505
      _deallocLabelsAfterUse(0)
madarasip@1186
   506
    {
kpeter@1190
   507
      initOrder();
kpeter@1190
   508
      initRNew1tRInOut1t();
madarasip@1186
   509
madarasip@1186
   510
      //reset mapping
madarasip@1186
   511
      for(typename G1::NodeIt n(g1);n!=INVALID;++n)
madarasip@1186
   512
        m[n]=INVALID;
madarasip@1186
   513
    }
madarasip@1186
   514
madarasip@1186
   515
    ///Destructor
madarasip@1186
   516
madarasip@1186
   517
    ///Destructor.
madarasip@1186
   518
    ///
madarasip@1186
   519
    ~Vf2pp()
madarasip@1186
   520
    {
madarasip@1186
   521
      if(_deallocMappingAfterUse)
madarasip@1186
   522
        delete &_mapping;
madarasip@1186
   523
      if(_deallocLabelsAfterUse) {
madarasip@1186
   524
        delete &_intLabels1;
madarasip@1186
   525
        delete &_intLabels2;
madarasip@1186
   526
      }
madarasip@1186
   527
    }
madarasip@1186
   528
madarasip@1186
   529
    ///Returns the current mapping type.
madarasip@1186
   530
madarasip@1186
   531
    ///Returns the current mapping type.
madarasip@1186
   532
    ///
madarasip@1186
   533
    MappingType mappingType() const
madarasip@1186
   534
    {
madarasip@1186
   535
      return _mapping_type;
madarasip@1186
   536
    }
madarasip@1186
   537
madarasip@1186
   538
    ///Sets the mapping type
madarasip@1186
   539
madarasip@1186
   540
    ///Sets the mapping type.
madarasip@1186
   541
    ///
madarasip@1186
   542
    ///The mapping type is set to \ref SUBGRAPH by default.
madarasip@1186
   543
    ///
madarasip@1186
   544
    ///\sa See \ref MappingType for the possible values.
madarasip@1186
   545
    void mappingType(MappingType m_type)
madarasip@1186
   546
    {
madarasip@1186
   547
      _mapping_type = m_type;
madarasip@1186
   548
    }
madarasip@1186
   549
madarasip@1186
   550
    ///Finds a mapping.
madarasip@1186
   551
madarasip@1186
   552
    ///This method finds a mapping from g1 into g2 according to the mapping
madarasip@1186
   553
    ///type set by \ref mappingType(MappingType) "mappingType()".
madarasip@1186
   554
    ///
madarasip@1186
   555
    ///By subsequent calls, it returns all possible mappings one-by-one.
madarasip@1186
   556
    ///
madarasip@1186
   557
    ///\retval true if a mapping is found.
madarasip@1186
   558
    ///\retval false if there is no (more) mapping.
madarasip@1186
   559
    bool find()
madarasip@1186
   560
    {
madarasip@1186
   561
      switch(_mapping_type)
madarasip@1186
   562
        {
madarasip@1186
   563
        case SUBGRAPH:
madarasip@1186
   564
          return extMatch<SUBGRAPH>();
madarasip@1186
   565
        case INDUCED:
madarasip@1186
   566
          return extMatch<INDUCED>();
madarasip@1186
   567
        case ISOMORPH:
madarasip@1186
   568
          return extMatch<ISOMORPH>();
madarasip@1186
   569
        default:
madarasip@1186
   570
          return false;
madarasip@1186
   571
        }
madarasip@1186
   572
    }
madarasip@1186
   573
  };
madarasip@1186
   574
madarasip@1186
   575
  template<typename G1, typename G2>
madarasip@1186
   576
  class Vf2ppWizardBase {
madarasip@1186
   577
  protected:
madarasip@1186
   578
    typedef G1 Graph1;
madarasip@1186
   579
    typedef G2 Graph2;
madarasip@1186
   580
madarasip@1186
   581
    const G1 &_g1;
madarasip@1186
   582
    const G2 &_g2;
madarasip@1186
   583
madarasip@1186
   584
    MappingType _mapping_type;
madarasip@1186
   585
madarasip@1186
   586
    typedef typename G1::template NodeMap<typename G2::Node> Mapping;
madarasip@1186
   587
    bool _local_mapping;
madarasip@1186
   588
    void *_mapping;
madarasip@1186
   589
    void createMapping() {
madarasip@1186
   590
      _mapping = new Mapping(_g1);
madarasip@1186
   591
    }
madarasip@1186
   592
madarasip@1186
   593
    bool _local_nodeLabels;
madarasip@1186
   594
    typedef typename G1::template NodeMap<int> NodeLabels1;
madarasip@1186
   595
    typedef typename G2::template NodeMap<int> NodeLabels2;
madarasip@1186
   596
    void *_nodeLabels1, *_nodeLabels2;
madarasip@1186
   597
    void createNodeLabels() {
madarasip@1186
   598
      _nodeLabels1 = new NodeLabels1(_g1,0);
madarasip@1186
   599
      _nodeLabels2 = new NodeLabels2(_g2,0);
madarasip@1186
   600
    }
madarasip@1186
   601
madarasip@1186
   602
    Vf2ppWizardBase(const G1 &g1,const G2 &g2)
madarasip@1186
   603
      : _g1(g1), _g2(g2), _mapping_type(SUBGRAPH),
madarasip@1186
   604
        _local_mapping(1), _local_nodeLabels(1) { }
madarasip@1186
   605
  };
madarasip@1186
   606
madarasip@1186
   607
madarasip@1186
   608
  /// \brief Auxiliary class for the function-type interface of %VF2
madarasip@1186
   609
  /// Plus Plus algorithm.
madarasip@1186
   610
  ///
madarasip@1186
   611
  /// This auxiliary class implements the named parameters of
madarasip@1186
   612
  /// \ref vf2pp() "function-type interface" of \ref Vf2pp algorithm.
madarasip@1186
   613
  ///
madarasip@1186
   614
  /// \warning This class is not to be used directly.
madarasip@1186
   615
  ///
madarasip@1186
   616
  /// \tparam TR The traits class that defines various types used by the
madarasip@1186
   617
  /// algorithm.
madarasip@1186
   618
  template<typename TR>
madarasip@1186
   619
  class Vf2ppWizard : public TR {
madarasip@1186
   620
    typedef TR Base;
madarasip@1186
   621
    typedef typename TR::Graph1 Graph1;
madarasip@1186
   622
    typedef typename TR::Graph2 Graph2;
madarasip@1186
   623
    typedef typename TR::Mapping Mapping;
madarasip@1186
   624
    typedef typename TR::NodeLabels1 NodeLabels1;
madarasip@1186
   625
    typedef typename TR::NodeLabels2 NodeLabels2;
madarasip@1186
   626
madarasip@1186
   627
    using TR::_g1;
madarasip@1186
   628
    using TR::_g2;
madarasip@1186
   629
    using TR::_mapping_type;
madarasip@1186
   630
    using TR::_mapping;
madarasip@1186
   631
    using TR::_nodeLabels1;
madarasip@1186
   632
    using TR::_nodeLabels2;
madarasip@1186
   633
madarasip@1186
   634
  public:
madarasip@1186
   635
    ///Constructor
kpeter@1188
   636
    Vf2ppWizard(const Graph1 &g1,const Graph2 &g2) : Base(g1,g2) {}
madarasip@1186
   637
madarasip@1186
   638
    ///Copy constructor
madarasip@1186
   639
    Vf2ppWizard(const Base &b) : Base(b) {}
madarasip@1186
   640
madarasip@1186
   641
madarasip@1186
   642
    template<typename T>
madarasip@1186
   643
    struct SetMappingBase : public Base {
madarasip@1186
   644
      typedef T Mapping;
kpeter@1188
   645
      SetMappingBase(const Base &b) : Base(b) {}
madarasip@1186
   646
    };
madarasip@1186
   647
madarasip@1186
   648
    ///\brief \ref named-templ-param "Named parameter" for setting
madarasip@1186
   649
    ///the mapping.
madarasip@1186
   650
    ///
madarasip@1186
   651
    ///\ref named-templ-param "Named parameter" function for setting
madarasip@1186
   652
    ///the map that stores the found embedding.
madarasip@1186
   653
    template<typename T>
madarasip@1186
   654
    Vf2ppWizard< SetMappingBase<T> > mapping(const T &t) {
madarasip@1186
   655
      Base::_mapping=reinterpret_cast<void*>(const_cast<T*>(&t));
madarasip@1186
   656
      Base::_local_mapping = 0;
madarasip@1186
   657
      return Vf2ppWizard<SetMappingBase<T> >(*this);
madarasip@1186
   658
    }
madarasip@1186
   659
madarasip@1186
   660
    template<typename NL1, typename NL2>
madarasip@1186
   661
    struct SetNodeLabelsBase : public Base {
madarasip@1186
   662
      typedef NL1 NodeLabels1;
madarasip@1186
   663
      typedef NL2 NodeLabels2;
madarasip@1186
   664
      SetNodeLabelsBase(const Base &b) : Base(b) { }
madarasip@1186
   665
    };
madarasip@1186
   666
madarasip@1186
   667
    ///\brief \ref named-templ-param "Named parameter" for setting the
madarasip@1186
   668
    ///node labels.
madarasip@1186
   669
    ///
madarasip@1186
   670
    ///\ref named-templ-param "Named parameter" function for setting
madarasip@1186
   671
    ///the node labels.
madarasip@1186
   672
    ///
madarasip@1186
   673
    ///\param nodeLabels1 A \ref concepts::ReadMap "readable node map"
kpeter@1188
   674
    ///of g1 with integer values. In case of K different labels, the labels
kpeter@1188
   675
    ///must be the numbers {0,1,..,K-1}.
madarasip@1186
   676
    ///\param nodeLabels2 A \ref concepts::ReadMap "readable node map"
kpeter@1188
   677
    ///of g2 with integer values. In case of K different labels, the labels
kpeter@1188
   678
    ///must be the numbers {0,1,..,K-1}.
madarasip@1186
   679
    template<typename NL1, typename NL2>
madarasip@1186
   680
    Vf2ppWizard< SetNodeLabelsBase<NL1,NL2> >
madarasip@1186
   681
    nodeLabels(const NL1 &nodeLabels1, const NL2 &nodeLabels2) {
madarasip@1186
   682
      Base::_local_nodeLabels = 0;
madarasip@1186
   683
      Base::_nodeLabels1=
madarasip@1186
   684
        reinterpret_cast<void*>(const_cast<NL1*>(&nodeLabels1));
madarasip@1186
   685
      Base::_nodeLabels2=
madarasip@1186
   686
        reinterpret_cast<void*>(const_cast<NL2*>(&nodeLabels2));
madarasip@1186
   687
      return Vf2ppWizard<SetNodeLabelsBase<NL1,NL2> >
madarasip@1186
   688
        (SetNodeLabelsBase<NL1,NL2>(*this));
madarasip@1186
   689
    }
madarasip@1186
   690
madarasip@1186
   691
madarasip@1186
   692
    ///\brief \ref named-templ-param "Named parameter" for setting
madarasip@1186
   693
    ///the mapping type.
madarasip@1186
   694
    ///
madarasip@1186
   695
    ///\ref named-templ-param "Named parameter" for setting
madarasip@1186
   696
    ///the mapping type.
madarasip@1186
   697
    ///
madarasip@1186
   698
    ///The mapping type is set to \ref SUBGRAPH by default.
madarasip@1186
   699
    ///
madarasip@1186
   700
    ///\sa See \ref MappingType for the possible values.
madarasip@1186
   701
    Vf2ppWizard<Base> &mappingType(MappingType m_type) {
madarasip@1186
   702
      _mapping_type = m_type;
madarasip@1186
   703
      return *this;
madarasip@1186
   704
    }
madarasip@1186
   705
madarasip@1186
   706
    ///\brief \ref named-templ-param "Named parameter" for setting
madarasip@1186
   707
    ///the mapping type to \ref INDUCED.
madarasip@1186
   708
    ///
madarasip@1186
   709
    ///\ref named-templ-param "Named parameter" for setting
madarasip@1186
   710
    ///the mapping type to \ref INDUCED.
madarasip@1186
   711
    Vf2ppWizard<Base> &induced() {
madarasip@1186
   712
      _mapping_type = INDUCED;
madarasip@1186
   713
      return *this;
madarasip@1186
   714
    }
madarasip@1186
   715
madarasip@1186
   716
    ///\brief \ref named-templ-param "Named parameter" for setting
madarasip@1186
   717
    ///the mapping type to \ref ISOMORPH.
madarasip@1186
   718
    ///
madarasip@1186
   719
    ///\ref named-templ-param "Named parameter" for setting
madarasip@1186
   720
    ///the mapping type to \ref ISOMORPH.
madarasip@1186
   721
    Vf2ppWizard<Base> &iso() {
madarasip@1186
   722
      _mapping_type = ISOMORPH;
madarasip@1186
   723
      return *this;
madarasip@1186
   724
    }
madarasip@1186
   725
madarasip@1186
   726
    ///Runs the %VF2 Plus Plus algorithm.
madarasip@1186
   727
madarasip@1186
   728
    ///This method runs the VF2 Plus Plus algorithm.
madarasip@1186
   729
    ///
madarasip@1186
   730
    ///\retval true if a mapping is found.
madarasip@1186
   731
    ///\retval false if there is no mapping.
madarasip@1186
   732
    bool run() {
madarasip@1186
   733
      if(Base::_local_mapping)
madarasip@1186
   734
        Base::createMapping();
madarasip@1186
   735
      if(Base::_local_nodeLabels)
madarasip@1186
   736
        Base::createNodeLabels();
madarasip@1186
   737
madarasip@1186
   738
      Vf2pp<Graph1, Graph2, Mapping, NodeLabels1, NodeLabels2 >
madarasip@1186
   739
        alg(_g1, _g2, *reinterpret_cast<Mapping*>(_mapping),
madarasip@1186
   740
            *reinterpret_cast<NodeLabels1*>(_nodeLabels1),
madarasip@1186
   741
            *reinterpret_cast<NodeLabels2*>(_nodeLabels2));
madarasip@1186
   742
madarasip@1186
   743
      alg.mappingType(_mapping_type);
madarasip@1186
   744
madarasip@1186
   745
      const bool ret = alg.find();
madarasip@1186
   746
madarasip@1186
   747
      if(Base::_local_nodeLabels) {
madarasip@1186
   748
        delete reinterpret_cast<NodeLabels1*>(_nodeLabels1);
madarasip@1186
   749
        delete reinterpret_cast<NodeLabels2*>(_nodeLabels2);
madarasip@1186
   750
      }
madarasip@1186
   751
      if(Base::_local_mapping)
madarasip@1186
   752
        delete reinterpret_cast<Mapping*>(_mapping);
madarasip@1186
   753
madarasip@1186
   754
      return ret;
madarasip@1186
   755
    }
madarasip@1186
   756
madarasip@1186
   757
    ///Get a pointer to the generated Vf2pp object.
madarasip@1186
   758
madarasip@1186
   759
    ///Gives a pointer to the generated Vf2pp object.
madarasip@1186
   760
    ///
madarasip@1186
   761
    ///\return Pointer to the generated Vf2pp object.
madarasip@1186
   762
    ///\warning Don't forget to delete the referred Vf2pp object after use.
madarasip@1186
   763
    Vf2pp<Graph1, Graph2, Mapping, NodeLabels1, NodeLabels2 >*
madarasip@1186
   764
    getPtrToVf2ppObject(){
madarasip@1186
   765
      if(Base::_local_mapping)
madarasip@1186
   766
        Base::createMapping();
madarasip@1186
   767
      if(Base::_local_nodeLabels)
madarasip@1186
   768
        Base::createNodeLabels();
madarasip@1186
   769
madarasip@1186
   770
      Vf2pp<Graph1, Graph2, Mapping, NodeLabels1, NodeLabels2 >* ptr =
madarasip@1186
   771
        new Vf2pp<Graph1, Graph2, Mapping, NodeLabels1, NodeLabels2>
madarasip@1186
   772
        (_g1, _g2, *reinterpret_cast<Mapping*>(_mapping),
madarasip@1186
   773
         *reinterpret_cast<NodeLabels1*>(_nodeLabels1),
madarasip@1186
   774
         *reinterpret_cast<NodeLabels2*>(_nodeLabels2));
madarasip@1186
   775
      ptr->mappingType(_mapping_type);
madarasip@1186
   776
      if(Base::_local_mapping)
madarasip@1186
   777
        ptr->_deallocMappingAfterUse=true;
madarasip@1186
   778
      if(Base::_local_nodeLabels)
madarasip@1186
   779
        ptr->_deallocLabelMapsAfterUse=true;
madarasip@1186
   780
madarasip@1186
   781
      return ptr;
madarasip@1186
   782
    }
madarasip@1186
   783
madarasip@1186
   784
    ///Counts the number of mappings.
madarasip@1186
   785
madarasip@1186
   786
    ///This method counts the number of mappings.
madarasip@1186
   787
    ///
madarasip@1186
   788
    /// \return The number of mappings.
madarasip@1186
   789
    int count() {
madarasip@1186
   790
      if(Base::_local_mapping)
madarasip@1186
   791
        Base::createMapping();
madarasip@1186
   792
      if(Base::_local_nodeLabels)
madarasip@1186
   793
        Base::createNodeLabels();
madarasip@1186
   794
madarasip@1186
   795
      Vf2pp<Graph1, Graph2, Mapping, NodeLabels1, NodeLabels2>
madarasip@1186
   796
        alg(_g1, _g2, *reinterpret_cast<Mapping*>(_mapping),
madarasip@1186
   797
            *reinterpret_cast<NodeLabels1*>(_nodeLabels1),
madarasip@1186
   798
            *reinterpret_cast<NodeLabels2*>(_nodeLabels2));
madarasip@1186
   799
madarasip@1186
   800
      alg.mappingType(_mapping_type);
madarasip@1186
   801
madarasip@1186
   802
      int ret = 0;
madarasip@1186
   803
      while(alg.find())
madarasip@1186
   804
        ++ret;
madarasip@1186
   805
madarasip@1186
   806
      if(Base::_local_nodeLabels) {
madarasip@1186
   807
        delete reinterpret_cast<NodeLabels1*>(_nodeLabels1);
madarasip@1186
   808
        delete reinterpret_cast<NodeLabels2*>(_nodeLabels2);
madarasip@1186
   809
      }
madarasip@1186
   810
      if(Base::_local_mapping)
madarasip@1186
   811
        delete reinterpret_cast<Mapping*>(_mapping);
madarasip@1186
   812
madarasip@1186
   813
      return ret;
madarasip@1186
   814
    }
madarasip@1186
   815
  };
madarasip@1186
   816
madarasip@1186
   817
madarasip@1186
   818
  ///Function-type interface for VF2 Plus Plus algorithm.
madarasip@1186
   819
madarasip@1186
   820
  /// \ingroup graph_isomorphism
madarasip@1186
   821
  ///Function-type interface for VF2 Plus Plus algorithm.
madarasip@1186
   822
  ///
madarasip@1186
   823
  ///This function has several \ref named-func-param "named parameters"
madarasip@1186
   824
  ///declared as the members of class \ref Vf2ppWizard.
madarasip@1186
   825
  ///The following examples show how to use these parameters.
madarasip@1186
   826
  ///\code
madarasip@1186
   827
  ///  ListGraph::NodeMap<ListGraph::Node> m(g);
madarasip@1186
   828
  ///  // Find an embedding of graph g1 into graph g2
madarasip@1186
   829
  ///  vf2pp(g1,g2).mapping(m).run();
madarasip@1186
   830
  ///
madarasip@1186
   831
  ///  // Check whether graphs g1 and g2 are isomorphic
madarasip@1186
   832
  ///  bool is_iso = vf2pp(g1,g2).iso().run();
madarasip@1186
   833
  ///
madarasip@1186
   834
  ///  // Count the number of isomorphisms
madarasip@1186
   835
  ///  int num_isos = vf2pp(g1,g2).iso().count();
madarasip@1186
   836
  ///
madarasip@1186
   837
  ///  // Iterate through all the induced subgraph mappings
kpeter@1188
   838
  ///  // of graph g1 into g2 using the labels c1 and c2
madarasip@1186
   839
  ///  auto* myVf2pp = vf2pp(g1,g2).mapping(m).nodeLabels(c1,c2)
madarasip@1186
   840
  ///  .induced().getPtrToVf2Object();
madarasip@1186
   841
  ///  while(myVf2pp->find()){
madarasip@1186
   842
  ///    //process the current mapping m
madarasip@1186
   843
  ///  }
madarasip@1186
   844
  ///  delete myVf22pp;
madarasip@1186
   845
  ///\endcode
madarasip@1186
   846
  ///\warning Don't forget to put the \ref Vf2ppWizard::run() "run()",
madarasip@1186
   847
  ///\ref Vf2ppWizard::count() "count()" or
madarasip@1186
   848
  ///the \ref Vf2ppWizard::getPtrToVf2ppObject() "getPtrToVf2ppObject()"
madarasip@1186
   849
  ///to the end of the expression.
madarasip@1186
   850
  ///\sa Vf2ppWizard
madarasip@1186
   851
  ///\sa Vf2pp
madarasip@1186
   852
  template<class G1, class G2>
madarasip@1186
   853
  Vf2ppWizard<Vf2ppWizardBase<G1,G2> > vf2pp(const G1 &g1, const G2 &g2) {
madarasip@1186
   854
    return Vf2ppWizard<Vf2ppWizardBase<G1,G2> >(g1,g2);
madarasip@1186
   855
  }
madarasip@1186
   856
madarasip@1186
   857
}
madarasip@1186
   858
madarasip@1186
   859
#endif
madarasip@1186
   860