Merge bugfix #598 to branch 1.2

Fix wrong iteration in ListGraph snapshot (#598)

Add arc_lookup_test.cc to the autoconf build env. (#517)

Merge bugfix #471 to branch 1.2

Have graph_to_eps.h compile with both gcc-3.3 and clang++-3.2 (#471)

Hopefully, it puts an end to the story of [115031ac8001] and [761fe0846f49].

Merge headmerge to branch 1.2

Merge >=1.2 branch heads

Merge >=1.2 branch heads

LEMON 1.2.4 released (e13061207f85 tagged as r1.2.4)

Backport [8a3fb3155dca] (Bugfix in test/maps_test.cc) to branch 1.2 (#469)

Remove -Werror form AM_INIT_AUTOMAKE

Update NEWS file

Merge bugfix #439 to branch 1.2

Clarification in biNodeConnected() doc (#439)

Fix biNodeConnected() function (#439)

Merge #294 to branch 1.2

Further ignore_unused_variable_warning() explicit namespaces (#294)

Merge #294 to branches >=1.2

Add explicit namespace to ignore_unused_variable_warning() usages (#294)

Merge further fixes #470 to branch 1.2

Further fixes for gcc version 3.3 and 4.3 (#470)

Unused local typedefs warning pragma is only applied to gcc>=4.8 (#470)

Merge bugfix #461 to branch 1.2

Bugfix in assert.h (#461)

Merge fix #470 to branch 1.2

Suppress 'unused local typedefs' warnings, and resolve others (#470)

Merge bugfix #445 to branch 1.2

Fix missing initialization in CplexEnv::CplexEnv() (#445)

Merge bugfix #453 to branch 1.2

Further GCC 4.7 compiler warning fixes (#453)

Merge #453 to branches >=1.2

Avoid GCC 4.7 compiler warnings (#453)

Merge bugfix #440 to branch 1.2

Fix a bug + remove redundant typedefs in dimacs-solver (#440)

Merge #449 to branch 1.2

Further clang compilation fixes (#449)

Merge #449 to branches >=1.2

Fix clang compilation warnings and errors (#449)

Merge bugfix #448 to branch 1.2

Bugfix in adaptor_test.cc (#448)

Merge bugfix #447 to branch 1.2

Bugfix in AllArcLookUp<> (#447)

Merge bugfix #444 to branch 1.2

Bugfix in path copy constructors and assignment operators (#444)

Merge bugfix #441 to branch 1.2

Fix buggy reinitialization in _solver_bits::VarIndex::clear() (#441)

- In addition, rows.clear() and cols.clear() are moved up to LpBase::clear()

Merge Intel C++ compatibility fixes to branch 1.2

Intel C++ compatibility fixes

Merge LP interface updates to branch 1.2

Make CBC interface compatible with latest CBC releases

CBC now uses the CLP backend unconditionally

Update CPLEX lookup

- References to explicit CPLEX version 9.1 have been removed
- Library file name must either be 'cplex.a' or 'cplex.dll'

Merge #432 and #433 to branch 1.2

Add missing doc/references.bib to release tarball (#432)

Merge

Support shared library build (#433)

Add missing doc/template.h to release tarball (#432)

Merge head merging to branch 1.2

Merge

Merge

Merge

Merge

Merge

Merge

Merge

LEMON 1.2.3 released (9e587caed953 tagged as r1.2.3)

Unify sources

Update NEWS file

Merge bugfix #430 to branch 1.2

Fix LpBase::Constr two-side limit bug (#430)

Merge #428 and #429 to branch 1.2

Fix VS warnings (#429)

Add lemon/lemon.pc.cmake to the release tarball (#428)

LEMON 1.2.2 released (d303bfa8b1ed tagged as r1.2.2)

Unify sources

Update NEWS file

Merge AUTHORS file update to branch 1.2

Update the AUTHORS file

Merge #382 to branch 1.2

Allow lgf file without Arc maps (#382)

A single '-' character in the @arcs sectio header indicates that
there is no arc map.

Merge #419 to branch 1.2

Do not look for COIN_VOL libraries

Also search for coin libs under ${COIN_ROOT_DIR}/lib/coin (#419)

Build of mip_test and lp_test precede the running of the tests (#419)

Merge GLPK fix #337 with CMAKE improvements

Merge bugfix #420 to branch 1.2

Fix IterableValueMap (#420)

Merge #418 to branch 1.2

Better Win CodeBlock/MinGW support (#418)
- Remove -ansi compilation flag
- Don't include sys/times.h when WIN32 is defined

Merge #416 to branch 1.2

Support tests with valgrind (#416)

Merge bugfix in #417 to branch 1.2

Bug fix in CostScaling (#417)

Merge #404 to branch 1.2

Remove doc header (show version number on the main page) (#404)

Update Doxygen config files + enable search (#404)

Merge CMAKE backports to branch 1.2

Backport the CMAKE related changesets from the main branch

[e20fecd1945f] Add check target for CMake (#388)
[e74b5db4f2c6] Put the output of chg-len.py in the version string (#389)
[7d166b8b8018] Safer call of ./scripts/chg-len.py on Windows (#389)
[659ba4805a48] Make CMAKE config more consistent with configure.ac (#390)
[63e4468c680e] Add 'Maintainer' CMAKE build type (#388, #390)
[a725503acfe9] Allow CPACK configuration on all platforms
[10242c611190] Create and install lemon.pc (#393)
[48e29534cf03] The deafult target doesn't build lp_test and mip_test (#388)
[0fbbdd578c06] Full path for DoxygenLayout.xml in Doxyfile.in (#395)
[481496e6d71f] SOURCE_BROWSER Doxygen switch is configurable from CMAKE (#395)
[09282720100b] update-external-tags CMAKE target (#395)

Backport [53bea38f71cb] 'Update Doxygen configuration file'

Merge bugfix #414 to branch 1.2

Fix wrong initialization in Preflow (#414)

Merge bugfix #392 to branch 1.2

Bug fix in Dfs::start(s,t) (#392)

LEMON 1.2.1 released (ffc2d2559fc9 tagged as r1.2.1)

Update NEWS file

Merge bugfix #371 to branch 1.2

Merge bugfix #372 to branch 1.2

Fix critical bug in preflow (#372)

The wrong transition between the bound decrease and highest active
heuristics caused the bug. The last node chosen in bound decrease mode
is used in the first iteration in highest active mode.

Bug fix in (di)graphCopy() (#371)

The target graph is cleared before adding nodes and arcs/edges.

Merge bugfix #368 to branch 1.2

Fix the usage of min() (#368)

Merge bugfix #366 to branch 1.2

Fix PredMatrixMapPath::empty() (#366)

Fix PredMapPath::empty() (#366)

Merge bugfix #364 to branch 1.2

Add missing UndirectedTags (#364)

LEMON 1.2 released (3ed8f7c8bed8 tagged as r1.2)

Merge #341, #360, #51, #359 to branch 1.2

Update NEWS file

Trim the documentation (#359)

Merge backout of a6eb9698c321 (#360,#51)

Small doc fixes and improvements (#359)

Backed out changeset a6eb9698c321 (#360, #51)

Release branch 1.2 created

Unify the sources (#339)

Fix multiple executions in matchings (fract. mathcings) (#356)

Merge #356

Merge #314

Minor doc fix related to #348

Uniforming primal scale to 2 (#314)

Fix documentation issues (#314)

Fractional matching initialization of weighted matchings (#314)

Add fractional matching algorithms (#314)

General improvements in weighted matching algorithms (#314)

- Fix include guard
- Uniform handling of MATCHED and UNMATCHED blossoms
- Prefer operations which decrease the number of trees
- Fix improper use of '/='

The solved problems did not cause wrong solution.

Fix multiple execution bug in weighted matchings (#356)

This chgset also redoes the fix of [28c7ad6f8d91] and its backpont to 1.1,
[268a052c3043].

Add doc/references.dox to .hgignore

Replace figure at matching doc #348

The original bibartite_matching.eps is kept for future use.

Rename min mean cycle classes and their members (#179)
with respect to the possible introduction of min ratio
cycle algorithms in the future.

The renamed classes:
- Karp --> KarpMmc
- HartmannOrlin --> HartmannOrlinMmc
- Howard --> HowardMmc

The renamed members:
- cycleLength() --> cycleCost()
- cycleArcNum() --> cycleSize()
- findMinMean() --> findCycleMean()
- Value --> Cost
- LargeValue --> LargeCost
- SetLargeValue --> SetLargeCost

Fix gcc 3.3 compilation error (#354)

gcc 3.3 requires that a class has a default constructor if it has
template named parameters. (That constructor can be protected.)

Clarify type names in NetworkSimplex (#353)

This patch clarifies the misleading effects of the renamings
in [f3bc4e9b5f3a].

Merge #306

Add tolerance() functions for HaoOrlin (#306)

Merge #301

Also test fullInit() in suurballe_test (#181, #323)

Add traits class + named parameters to Suurballe (#323)

The following types can be modified using named parameters:
- FlowMap
- PotentialMap
- Path
- Heap + HeapCrossRef

Merge #181, #323

Rename heap structures (#301)

- KaryHeap --> DHeap
- FouraryHeap --> QuadHeap
- BinomHeap --> BinomialHeap

Add a fullInit() function to Suurballe (#181, #323)
to provide faster handling of multiple targets.
A start() function is also added, just for the sake of
convenience.

Rework and improve Suurballe (#323)

- Improve the implementation: use a specific, faster variant of
residual Dijkstra for the first search.
- Some reorganizatiopn to make the code simpler.
- Small doc improvements.

Remove unnecessary integer requirement in Suurballe (#323)

Bug fix in Suurballe (#323)

Configurable glpk prefix in ./scripts/bootstrap.sh and ...
unneeded solver backends are explicitely switched off with --without-*

Merge #342

Improve README and mainpage.dox (#342)

Merge #347

Use 'long long' flow cost in dimacs-solver.cc (#347)

Merge

Support tolerance technique for BellmanFord (#51)

A new operation traits class BellmanFordToleranceOperationTraits
is introduced, which uses the tolerance technique in its less()
function. This class can be used with the SetOperationTraits
named template parameter.

Merge #332

ArgParser can throw exception instead of exit(1) (#332)

Better return type for cycleLength() functions (#179)
in the min mean cycle algorithms.

The original Value type is used instead of the LargeValue type,
which is introduced for internal computations.

Merge #340

New heuristics for MCF algorithms (#340)
and some implementation improvements.

- A useful heuristic is added to NetworkSimplex to make the
initial pivots faster.
- A powerful global update heuristic is added to CostScaling
and the implementation is reworked with various improvements.
- Better relabeling in CostScaling to improve numerical stability
and make the code faster.
- A small improvement is made in CapacityScaling for better
delta computation.
- Add notes to the classes about the usage of vector<char> instead
of vector<bool> for efficiency reasons.

Merge bugfix #336

Fix the date field comment of graphToEps() output (#336)

Modify the header of scripts/bib2dox.py (#184)

Merge

Fix LpBase::addRow(Constr) (#334)

Merge bugfix #337

Use void* like LPX object (#337)

Merge

Handle graph changes in the MCF algorithms (#327)

The reset() functions are renamed to resetParams() and the new reset()
functions handle the graph chnages, as well.

Merge

Doc improvements for planarity related tools (#62)

Port planar image from SVN -r3524 (#62)

Merge

Add doc for the traits class parameters (#315)

Add more information on Makefile variables (#316)

Add a warning about huge capacities in Preflow (#319)

Merge #180 and a bugfix in #51

Small bug fixes (#180)

Rename a private type in MCF classes (#180)

The new MCF algorithms define a private map type VectorMap,
which could be misleading, since there is an other VectorMap
defined in lemon/bits/vector_map.h. Thus the new type is
is renamed to StaticVectorMap.

Adds tests for the new MCF algorithms (#180)

Rework the MCF test file to help extending it (#180)

Fixes in the heap concept to avoid warnings (#180)

Add citations to CycleCanceling (#180, #184)

Entirely rework cycle canceling algorithms (#180)

- Move the cycle canceling algorithms (CycleCanceling, CancelAndTighten)
into one class (CycleCanceling).
- Add a Method parameter to the run() function to be able to select
the used cycle canceling method.
- Use the new interface similarly to NetworkSimplex.
- Rework the implementations using an efficient internal structure
for handling the residual network.
This improvement made the codes much faster.
- Handle GEQ supply type (LEQ is not supported).
- Handle infinite upper bounds.
- Handle negative costs (for arcs of finite upper bound).
- Extend the documentation.

Port cycle canceling algorithms from SVN -r3524 (#180)

Add citations to the scaling MCF algorithms (#180, #184)
and improve the doc of their group.

Small doc improvements + unifications in MCF classes (#180)

Small implementation improvements in MCF algorithms (#180)

- Handle max() as infinite value (not only infinity()).
- Better GEQ handling in CapacityScaling.
- Skip the unnecessary saturating operations in the first phase in
CapacityScaling.
- Use vector<char> instead of vector<bool> and vector<int> if it is
possible and it proved to be usually faster.

More options for run() in scaling MCF algorithms (#180)

- Three methods can be selected and the scaling factor can be
given for CostScaling.
- The scaling factor can be given for CapacityScaling.

Entirely rework CostScaling (#180)

- Use the new interface similarly to NetworkSimplex.
- Rework the implementation using an efficient internal structure
for handling the residual network. This improvement made the
code much faster.
- Handle GEQ supply type (LEQ is not supported).
- Handle infinite upper bounds.
- Handle negative costs (for arcs of finite upper bound).
- Traits class + named parameter for the LargeCost type used in
internal computations.
- Extend the documentation.

Port CostScaling from SVN -r3524 (#180)

Traits class + a named parameter for CapacityScaling (#180)
to specify the heap used in internal Dijkstra computations.

Entirely rework CapacityScaling (#180)

- Use the new interface similarly to NetworkSimplex.
- Rework the implementation using an efficient internal structure
for handling the residual network. This improvement made the
code much faster (up to 2-5 times faster on large graphs).
- Handle GEQ supply type (LEQ is not supported).
- Handle negative costs for arcs of finite capacity.
(Note that this algorithm cannot handle arcs of negative cost
and infinite upper bound, thus it returns UNBOUNDED if such
an arc exists.)
- Extend the documentation.

Port CapacityScaling from SVN -r3524 (#180)

Memory leak bugfix in BellmanFord (#51)

Merge bugfix #330

Merge

Bug fix in map_extender.h (#330)

Fix clear() function in ExtendFindEnum (#335)

Merge #62

Planarity checking function instead of class (#62)

Port planarity related algorithms from SVN 3509 (#62)

Merge

Fix in HartmannOrlin algorithm (#333)

Valgring option for ./scripts/bootstrap.sh

Optionally use valgrind when running tests + other build system fixes

Merge

Merge

Fix gcc-4.4 compilation warning

Map utility functions (#320)

Merge

Various doc improvements (#331)

- Add notes to the graph classes about the time of
item counting.
- Clarify the doc for run() in BFS and DFS.
- Other improvements.

Small doc fixes in several files (#331)

Doc improvements for Path and PathDumper concepts (#331)

Merge #321

Merge #293

Merge

Small fixes related to BellmanFord (#51)

- Add a missing #include.
- Add a missing const keyword for negativeCycle().
- Test if negativeCycle() is const function.

Merge #68 (Port static graph implementation)

Merge

Make some graph member functions static (#311, #68)

Add a new build() function to StaticDigraph (#68)

This function builds the digraph from an arc list that
contains pairs of integer indices from the range [0..n-1].
It is useful in the cases when you would like to build a
StaticDigraph from scratch, i.e. you do not want to build
another digraph that can be copied using the other build()
function.

Extend the interface of StaticDigraph (#68)
with index(), arc() and node() functions similarly to
other static graph structures.

Add documentation for StaticDigraph (#68)

Small improvements + add tests for StaticDigraph (#68)

Port StaticDigraph from SVN -r3524 (#68)

Small fix in the doc (#179)

Add citations to the min mean cycle classes (#179, #184)

Merge #179 (Port the min mean cycle algorithms)

Add tolerance() functions for MMC classes (#179)

Separate group for the min mean cycle classes (#179)

Simplify comparisons in min mean cycle classes (#179)
using extreme INF values instead of bool flags.

Add HartmannOrlin algorithm class (#179)
This algorithm is an improved version of Karp's original method,
it applies an efficient early termination scheme.
The interface is the same as Karp's and Howard's interface.

Add Karp algorithm class (#179)
based on the MinMeanCycle implementation in SVN -r3436.
The interface is reworked to be the same as Howard's interface.

Rename MinMeanCycle to Howard (#179)

Add a detailed test file for MinMeanCycle and fix test_tools.h (#179)

Rename cyclePath() to cycle() in MinMeanCycle (#179)

Traits class + named parameters for MinMeanCycle (#179)

- Add a Traits class defining LargeValue, Tolerance, Path types.
LargeValue is used for internal computations, it is 'long long'
if the length type is integer, otherwise it is 'double'.
- Add named template parameters for LargeValue and Path types.
- Improve numerical stability: remove divisions from the internal
computations. If the arc lengths are integers, then all used
values are integers (except for the cycleMean() query function,
of course).