Unify sources

Update NEWS file

Merge AUTHORS file update to branch 1.2

Update the AUTHORS file

Merge #382 to branch 1.2

Allow lgf file without Arc maps (#382)

A single '-' character in the @arcs sectio header indicates that
there is no arc map.

Merge #419 to branch 1.2

Do not look for COIN_VOL libraries

Also search for coin libs under ${COIN_ROOT_DIR}/lib/coin (#419)

Build of mip_test and lp_test precede the running of the tests (#419)

Merge GLPK fix #337 with CMAKE improvements

Merge bugfix #420 to branch 1.2

Fix IterableValueMap (#420)

Merge #418 to branch 1.2

Better Win CodeBlock/MinGW support (#418)
- Remove -ansi compilation flag
- Don't include sys/times.h when WIN32 is defined

Merge #416 to branch 1.2

Support tests with valgrind (#416)

Merge bugfix in #417 to branch 1.2

Bug fix in CostScaling (#417)

Merge #404 to branch 1.2

Remove doc header (show version number on the main page) (#404)

Update Doxygen config files + enable search (#404)

Merge CMAKE backports to branch 1.2

Backport the CMAKE related changesets from the main branch

[e20fecd1945f] Add check target for CMake (#388)
[e74b5db4f2c6] Put the output of chg-len.py in the version string (#389)
[7d166b8b8018] Safer call of ./scripts/chg-len.py on Windows (#389)
[659ba4805a48] Make CMAKE config more consistent with configure.ac (#390)
[63e4468c680e] Add 'Maintainer' CMAKE build type (#388, #390)
[a725503acfe9] Allow CPACK configuration on all platforms
[10242c611190] Create and install lemon.pc (#393)
[48e29534cf03] The deafult target doesn't build lp_test and mip_test (#388)
[0fbbdd578c06] Full path for DoxygenLayout.xml in Doxyfile.in (#395)
[481496e6d71f] SOURCE_BROWSER Doxygen switch is configurable from CMAKE (#395)
[09282720100b] update-external-tags CMAKE target (#395)

Backport [53bea38f71cb] 'Update Doxygen configuration file'

Merge bugfix #414 to branch 1.2

Fix wrong initialization in Preflow (#414)

Merge bugfix #392 to branch 1.2

Bug fix in Dfs::start(s,t) (#392)

LEMON 1.2.1 released (ffc2d2559fc9 tagged as r1.2.1)

Update NEWS file

Merge bugfix #371 to branch 1.2

Merge bugfix #372 to branch 1.2

Fix critical bug in preflow (#372)

The wrong transition between the bound decrease and highest active
heuristics caused the bug. The last node chosen in bound decrease mode
is used in the first iteration in highest active mode.

Bug fix in (di)graphCopy() (#371)

The target graph is cleared before adding nodes and arcs/edges.

Merge bugfix #368 to branch 1.2

Fix the usage of min() (#368)

Merge bugfix #366 to branch 1.2

Fix PredMatrixMapPath::empty() (#366)

Fix PredMapPath::empty() (#366)

Merge bugfix #364 to branch 1.2

Add missing UndirectedTags (#364)

LEMON 1.2 released (3ed8f7c8bed8 tagged as r1.2)

Merge #341, #360, #51, #359 to branch 1.2

Update NEWS file

Trim the documentation (#359)

Merge backout of a6eb9698c321 (#360,#51)

Small doc fixes and improvements (#359)

Backed out changeset a6eb9698c321 (#360, #51)

Release branch 1.2 created

Unify the sources (#339)

Fix multiple executions in matchings (fract. mathcings) (#356)

Merge #356

Merge #314

Minor doc fix related to #348

Uniforming primal scale to 2 (#314)

Fix documentation issues (#314)

Fractional matching initialization of weighted matchings (#314)

Add fractional matching algorithms (#314)

General improvements in weighted matching algorithms (#314)

- Fix include guard
- Uniform handling of MATCHED and UNMATCHED blossoms
- Prefer operations which decrease the number of trees
- Fix improper use of '/='

The solved problems did not cause wrong solution.

Fix multiple execution bug in weighted matchings (#356)

This chgset also redoes the fix of [28c7ad6f8d91] and its backpont to 1.1,
[268a052c3043].

Add doc/references.dox to .hgignore

Replace figure at matching doc #348

The original bibartite_matching.eps is kept for future use.

Rename min mean cycle classes and their members (#179)
with respect to the possible introduction of min ratio
cycle algorithms in the future.

The renamed classes:
- Karp --> KarpMmc
- HartmannOrlin --> HartmannOrlinMmc
- Howard --> HowardMmc

The renamed members:
- cycleLength() --> cycleCost()
- cycleArcNum() --> cycleSize()
- findMinMean() --> findCycleMean()
- Value --> Cost
- LargeValue --> LargeCost
- SetLargeValue --> SetLargeCost

Fix gcc 3.3 compilation error (#354)

gcc 3.3 requires that a class has a default constructor if it has
template named parameters. (That constructor can be protected.)

Clarify type names in NetworkSimplex (#353)

This patch clarifies the misleading effects of the renamings
in [f3bc4e9b5f3a].

Merge #306

Add tolerance() functions for HaoOrlin (#306)

Merge #301

Also test fullInit() in suurballe_test (#181, #323)

Add traits class + named parameters to Suurballe (#323)

The following types can be modified using named parameters:
- FlowMap
- PotentialMap
- Path
- Heap + HeapCrossRef

Merge #181, #323

Rename heap structures (#301)

- KaryHeap --> DHeap
- FouraryHeap --> QuadHeap
- BinomHeap --> BinomialHeap

Add a fullInit() function to Suurballe (#181, #323)
to provide faster handling of multiple targets.
A start() function is also added, just for the sake of
convenience.

Rework and improve Suurballe (#323)

- Improve the implementation: use a specific, faster variant of
residual Dijkstra for the first search.
- Some reorganizatiopn to make the code simpler.
- Small doc improvements.

Remove unnecessary integer requirement in Suurballe (#323)

Bug fix in Suurballe (#323)

Configurable glpk prefix in ./scripts/bootstrap.sh and ...
unneeded solver backends are explicitely switched off with --without-*

Merge #342

Improve README and mainpage.dox (#342)

Merge #347

Use 'long long' flow cost in dimacs-solver.cc (#347)

Merge

Support tolerance technique for BellmanFord (#51)

A new operation traits class BellmanFordToleranceOperationTraits
is introduced, which uses the tolerance technique in its less()
function. This class can be used with the SetOperationTraits
named template parameter.

Merge #332

ArgParser can throw exception instead of exit(1) (#332)

Better return type for cycleLength() functions (#179)
in the min mean cycle algorithms.

The original Value type is used instead of the LargeValue type,
which is introduced for internal computations.

Merge #340

New heuristics for MCF algorithms (#340)
and some implementation improvements.

- A useful heuristic is added to NetworkSimplex to make the
initial pivots faster.
- A powerful global update heuristic is added to CostScaling
and the implementation is reworked with various improvements.
- Better relabeling in CostScaling to improve numerical stability
and make the code faster.
- A small improvement is made in CapacityScaling for better
delta computation.
- Add notes to the classes about the usage of vector<char> instead
of vector<bool> for efficiency reasons.

Merge bugfix #336

Fix the date field comment of graphToEps() output (#336)

Modify the header of scripts/bib2dox.py (#184)

Merge

Fix LpBase::addRow(Constr) (#334)

Merge bugfix #337

Use void* like LPX object (#337)

Merge

Handle graph changes in the MCF algorithms (#327)

The reset() functions are renamed to resetParams() and the new reset()
functions handle the graph chnages, as well.

Merge

Doc improvements for planarity related tools (#62)

Port planar image from SVN -r3524 (#62)

Merge

Add doc for the traits class parameters (#315)

Add more information on Makefile variables (#316)

Add a warning about huge capacities in Preflow (#319)

Merge #180 and a bugfix in #51

Small bug fixes (#180)

Rename a private type in MCF classes (#180)

The new MCF algorithms define a private map type VectorMap,
which could be misleading, since there is an other VectorMap
defined in lemon/bits/vector_map.h. Thus the new type is
is renamed to StaticVectorMap.

Adds tests for the new MCF algorithms (#180)

Rework the MCF test file to help extending it (#180)

Fixes in the heap concept to avoid warnings (#180)

Add citations to CycleCanceling (#180, #184)

Entirely rework cycle canceling algorithms (#180)

- Move the cycle canceling algorithms (CycleCanceling, CancelAndTighten)
into one class (CycleCanceling).
- Add a Method parameter to the run() function to be able to select
the used cycle canceling method.
- Use the new interface similarly to NetworkSimplex.
- Rework the implementations using an efficient internal structure
for handling the residual network.
This improvement made the codes much faster.
- Handle GEQ supply type (LEQ is not supported).
- Handle infinite upper bounds.
- Handle negative costs (for arcs of finite upper bound).
- Extend the documentation.

Port cycle canceling algorithms from SVN -r3524 (#180)

Add citations to the scaling MCF algorithms (#180, #184)
and improve the doc of their group.

Small doc improvements + unifications in MCF classes (#180)

Small implementation improvements in MCF algorithms (#180)

- Handle max() as infinite value (not only infinity()).
- Better GEQ handling in CapacityScaling.
- Skip the unnecessary saturating operations in the first phase in
CapacityScaling.
- Use vector<char> instead of vector<bool> and vector<int> if it is
possible and it proved to be usually faster.

More options for run() in scaling MCF algorithms (#180)

- Three methods can be selected and the scaling factor can be
given for CostScaling.
- The scaling factor can be given for CapacityScaling.

Entirely rework CostScaling (#180)

- Use the new interface similarly to NetworkSimplex.
- Rework the implementation using an efficient internal structure
for handling the residual network. This improvement made the
code much faster.
- Handle GEQ supply type (LEQ is not supported).
- Handle infinite upper bounds.
- Handle negative costs (for arcs of finite upper bound).
- Traits class + named parameter for the LargeCost type used in
internal computations.
- Extend the documentation.

Port CostScaling from SVN -r3524 (#180)