LEMON/LEMON-main Changeset - r782:ceb2756dea2a

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Changeset - r782:ceb2756dea2a

« 780:580af8
« 781:6f10c6

783:ef88c0 »

r782:ceb2756dea2a

Thu, 05 Nov 2009 10:27:17

[Not Reviewed]

0 comments (0 inline)

alpar (Alpar Juttner)
alpar@cs.elte.hu

Merge

0 46 8

merge default

0 files changed:

doc/references.bib

301

CMakeLists.txt

Makefile.am

configure.ac

doc/CMakeLists.txt

doc/Doxyfile.in

doc/Makefile.am

doc/groups.dox

doc/mainpage.dox

doc/min_cost_flow.dox

lemon/Makefile.am

lemon/bits/graph_extender.h

lemon/cbc.cc

lemon/cbc.h

lemon/clp.cc

lemon/clp.h

lemon/concepts/digraph.h

168

167

lemon/concepts/graph.h

338

318

lemon/concepts/graph_components.h

lemon/cplex.cc

lemon/cplex.h

lemon/edge_set.h

Changeset was too big and was cut off... Show full diff

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doc/references.bib

Show inline comments

 		%%%%% Defining LEMON %%%%%
 		@misc{lemon,
 		  key =          {LEMON},
 		  title =        {{LEMON} -- {L}ibrary for {E}fficient {M}odeling and
 		                  {O}ptimization in {N}etworks},
 		  howpublished = {\url{http://lemon.cs.elte.hu/}},
 		  year =         2009
+		}
 		@misc{egres,
 		  key =          {EGRES},
 		  title =        {{EGRES} -- {E}gerv{\'a}ry {R}esearch {G}roup on
 		                  {C}ombinatorial {O}ptimization},
 		  url =          {http://www.cs.elte.hu/egres/}
+		}
 		@misc{coinor,
 		  key =          {COIN-OR},
 		  title =        {{COIN-OR} -- {C}omputational {I}nfrastructure for
 		                  {O}perations {R}esearch},
 		  url =          {http://www.coin-or.org/}
+		}
 		%%%%% Other libraries %%%%%%
 		@misc{boost,
 		  key =          {Boost},
 		  title =        {{B}oost {C++} {L}ibraries},
 		  url =          {http://www.boost.org/}
+		}
 		@book{bglbook,
 		  author =       {Jeremy G. Siek and Lee-Quan Lee and Andrew
 		                  Lumsdaine},
 		  title =        {The Boost Graph Library: User Guide and Reference
 		                  Manual},
 		  publisher =    {Addison-Wesley},
 		  year =         2002
+		}
 		@misc{leda,
 		  key =          {LEDA},
 		  title =        {{LEDA} -- {L}ibrary of {E}fficient {D}ata {T}ypes and
 		                  {A}lgorithms},
 		  url =          {http://www.algorithmic-solutions.com/}
+		}
 		@book{ledabook,
 		  author =       {Kurt Mehlhorn and Stefan N{\"a}her},
 		  title =        {{LEDA}: {A} platform for combinatorial and geometric
 		                  computing},
 		  isbn =         {0-521-56329-1},
 		  publisher =    {Cambridge University Press},
 		  address =      {New York, NY, USA},
 		  year =         1999
+		}
 		%%%%% Tools that LEMON depends on %%%%%
 		@misc{cmake,
 		  key =          {CMake},
 		  title =        {{CMake} -- {C}ross {P}latform {M}ake},
 		  url =          {http://www.cmake.org/}
+		}
 		@misc{doxygen,
 		  key =          {Doxygen},
 		  title =        {{Doxygen} -- {S}ource code documentation generator
 		                  tool},
 		  url =          {http://www.doxygen.org/}
+		}
 		%%%%% LP/MIP libraries %%%%%
 		@misc{glpk,
 		  key =          {GLPK},
 		  title =        {{GLPK} -- {GNU} {L}inear {P}rogramming {K}it},
 		  url =          {http://www.gnu.org/software/glpk/}
+		}
 		@misc{clp,
 		  key =          {Clp},
 		  title =        {{Clp} -- {Coin-Or} {L}inear {P}rogramming},
 		  url =          {http://projects.coin-or.org/Clp/}
+		}
 		@misc{cbc,
 		  key =          {Cbc},
 		  title =        {{Cbc} -- {Coin-Or} {B}ranch and {C}ut},
 		  url =          {http://projects.coin-or.org/Cbc/}
+		}
 		@misc{cplex,
 		  key =          {CPLEX},
 		  title =        {{ILOG} {CPLEX}},
 		  url =          {http://www.ilog.com/}
+		}
 		@misc{soplex,
 		  key =          {SoPlex},
 		  title =        {{SoPlex} -- {T}he {S}equential {O}bject-{O}riented
 		                  {S}implex},
 		  url =          {http://soplex.zib.de/}
+		}
 		%%%%% General books %%%%%
 		@book{amo93networkflows,
 		  author =       {Ravindra K. Ahuja and Thomas L. Magnanti and James
 		                  B. Orlin},
 		  title =        {Network Flows: Theory, Algorithms, and Applications},
 		  publisher =    {Prentice-Hall, Inc.},
 		  year =         1993,
 		  month =        feb,
 		  isbn =         {978-0136175490}
+		}
 		@book{schrijver03combinatorial,
 		  author =       {Alexander Schrijver},
 		  title =        {Combinatorial Optimization: Polyhedra and Efficiency},
 		  publisher =    {Springer-Verlag},
 		  year =         2003,
 		  isbn =         {978-3540443896}
+		}
 		@book{clrs01algorithms,
 		  author =       {Thomas H. Cormen and Charles E. Leiserson and Ronald
 		                  L. Rivest and Clifford Stein},
 		  title =        {Introduction to Algorithms},
 		  publisher =    {The MIT Press},
 		  year =         2001,
 		  edition =      {2nd}
+		}
 		@book{stroustrup00cpp,
 		  author =       {Bjarne Stroustrup},
 		  title =        {The C++ Programming Language},
 		  edition =      {3rd},
 		  publisher =    {Addison-Wesley Professional},
 		  isbn =         0201700735,
 		  month =        {February},
 		  year =         2000
+		}
 		%%%%% Maximum flow algorithms %%%%%
 		@article{edmondskarp72theoretical,
 		  author =       {Jack Edmonds and Richard M. Karp},
 		  title =        {Theoretical improvements in algorithmic efficiency
 		                  for network flow problems},
 		  journal =      {Journal of the ACM},
 		  year =         1972,
 		  volume =       19,
 		  number =       2,
 		  pages =        {248-264}
+		}
 		@article{goldberg88newapproach,
 		  author =       {Andrew V. Goldberg and Robert E. Tarjan},
 		  title =        {A new approach to the maximum flow problem},
 		  journal =      {Journal of the ACM},
 		  year =         1988,
 		  volume =       35,
 		  number =       4,
 		  pages =        {921-940}
+		}
 		@article{dinic70algorithm,
 		  author =       {E. A. Dinic},
 		  title =        {Algorithm for solution of a problem of maximum flow
 		                  in a network with power estimation},
 		  journal =      {Soviet Math. Doklady},
 		  year =         1970,
 		  volume =       11,
 		  pages =        {1277-1280}
+		}
 		@article{goldberg08partial,
 		  author =       {Andrew V. Goldberg},
 		  title =        {The Partial Augment-Relabel Algorithm for the
 		                  Maximum Flow Problem},
 		  journal =      {16th Annual European Symposium on Algorithms},
 		  year =         2008,
 		  pages =        {466-477}
+		}
 		@article{sleator83dynamic,
 		  author =       {Daniel D. Sleator and Robert E. Tarjan},
 		  title =        {A data structure for dynamic trees},
 		  journal =      {Journal of Computer and System Sciences},
 		  year =         1983,
 		  volume =       26,
 		  number =       3,
 		  pages =        {362-391}
+		}
 		%%%%% Minimum mean cycle algorithms %%%%%
 		@article{karp78characterization,
 		  author =       {Richard M. Karp},
 		  title =        {A characterization of the minimum cycle mean in a
 		                  digraph},
 		  journal =      {Discrete Math.},
 		  year =         1978,
 		  volume =       23,
 		  pages =        {309-311}
+		}
 		@article{dasdan98minmeancycle,
 		  author =       {Ali Dasdan and Rajesh K. Gupta},
 		  title =        {Faster Maximum and Minimum Mean Cycle Alogrithms for
 		                  System Performance Analysis},
 		  journal =      {IEEE Transactions on Computer-Aided Design of
 		                  Integrated Circuits and Systems},
 		  year =         1998,
 		  volume =       17,
 		  number =       10,
 		  pages =        {889-899}
+		}
 		%%%%% Minimum cost flow algorithms %%%%%
 		@article{klein67primal,
 		  author =       {Morton Klein},
 		  title =        {A primal method for minimal cost flows with
 		                  applications to the assignment and transportation
 		                  problems},
 		  journal =      {Management Science},
 		  year =         1967,
 		  volume =       14,
 		  pages =        {205-220}
+		}
 		@article{goldberg89cyclecanceling,
 		  author =       {Andrew V. Goldberg and Robert E. Tarjan},
 		  title =        {Finding minimum-cost circulations by canceling
 		                  negative cycles},
 		  journal =      {Journal of the ACM},
 		  year =         1989,
 		  volume =       36,
 		  number =       4,
 		  pages =        {873-886}
+		}
 		@article{goldberg90approximation,
 		  author =       {Andrew V. Goldberg and Robert E. Tarjan},
 		  title =        {Finding Minimum-Cost Circulations by Successive
 		                  Approximation},
 		  journal =      {Mathematics of Operations Research},
 		  year =         1990,
 		  volume =       15,
 		  number =       3,
 		  pages =        {430-466}
+		}
 		@article{goldberg97efficient,
 		  author =       {Andrew V. Goldberg},
 		  title =        {An Efficient Implementation of a Scaling
 		                  Minimum-Cost Flow Algorithm},
 		  journal =      {Journal of Algorithms},
 		  year =         1997,
 		  volume =       22,
 		  number =       1,
 		  pages =        {1-29}
+		}
 		@article{bunnagel98efficient,
 		  author =       {Ursula B{\"u}nnagel and Bernhard Korte and Jens
 		                  Vygen},
 		  title =        {Efficient implementation of the {G}oldberg-{T}arjan
 		                  minimum-cost flow algorithm},
 		  journal =      {Optimization Methods and Software},
 		  year =         1998,
 		  volume =       10,
 		  pages =        {157-174}
+		}
 		@book{dantzig63linearprog,
 		  author =       {George B. Dantzig},
 		  title =        {Linear Programming and Extensions},
 		  publisher =    {Princeton University Press},
 		  year =         1963
+		}
 		@mastersthesis{kellyoneill91netsimplex,
 		  author =       {Damian J. Kelly and Garrett M. O'Neill},
 		  title =        {The Minimum Cost Flow Problem and The Network
 		                  Simplex Method},
 		  school =       {University College},
 		  address =      {Dublin, Ireland},
 		  year =         1991,
 		  month =        sep,
+		}

CMakeLists.txt

Show inline comments

 		CMAKE_MINIMUM_REQUIRED(VERSION 2.6)
 		SET(PROJECT_NAME "LEMON")
 		PROJECT(${PROJECT_NAME})
 		IF(EXISTS ${PROJECT_SOURCE_DIR}/cmake/version.cmake)
 		  INCLUDE(${PROJECT_SOURCE_DIR}/cmake/version.cmake)
 		ELSEIF(DEFINED ENV{LEMON_VERSION})
 		  SET(LEMON_VERSION $ENV{LEMON_VERSION} CACHE STRING "LEMON version string.")
 		ELSE()
 		  EXECUTE_PROCESS(
 		    COMMAND hg id -i
 		    WORKING_DIRECTORY ${PROJECT_SOURCE_DIR}
 		    OUTPUT_VARIABLE HG_REVISION
 		    ERROR_QUIET
 		    OUTPUT_STRIP_TRAILING_WHITESPACE
+		  )
 		  IF(HG_REVISION STREQUAL "")
 		    SET(HG_REVISION "hg-tip")
 		  ENDIF()
 		  SET(LEMON_VERSION ${HG_REVISION} CACHE STRING "LEMON version string.")
 		ENDIF()
 		SET(PROJECT_VERSION ${LEMON_VERSION})
 		SET(CMAKE_MODULE_PATH ${PROJECT_SOURCE_DIR}/cmake)
 		FIND_PACKAGE(Doxygen)
 		FIND_PACKAGE(Ghostscript)
 		FIND_PACKAGE(GLPK 4.33)
 		FIND_PACKAGE(CPLEX)
 		FIND_PACKAGE(COIN)
 		INCLUDE(CheckTypeSize)
 		CHECK_TYPE_SIZE("long long" LONG_LONG)
 		SET(LEMON_HAVE_LONG_LONG ${HAVE_LONG_LONG})
 		INCLUDE(FindPythonInterp)
 		ENABLE_TESTING()
 		ADD_SUBDIRECTORY(lemon)
 		IF(${CMAKE_SOURCE_DIR} STREQUAL ${PROJECT_SOURCE_DIR})
 		  ADD_SUBDIRECTORY(demo)
 		  ADD_SUBDIRECTORY(tools)
 		  ADD_SUBDIRECTORY(doc)
 		  ADD_SUBDIRECTORY(test)
 		ENDIF()
 		CONFIGURE_FILE(
 		  ${PROJECT_SOURCE_DIR}/cmake/LEMONConfig.cmake.in
 		  ${PROJECT_BINARY_DIR}/cmake/LEMONConfig.cmake
 		  @ONLY
+		)
 		IF(UNIX)
 		  INSTALL(
 		    FILES ${PROJECT_BINARY_DIR}/cmake/LEMONConfig.cmake
 		    DESTINATION share/lemon/cmake
+		  )
 		ELSEIF(WIN32)
 		  INSTALL(
 		    FILES ${PROJECT_BINARY_DIR}/cmake/LEMONConfig.cmake
 		    DESTINATION cmake
+		  )
 		ENDIF()
 		IF(${CMAKE_SOURCE_DIR} STREQUAL ${PROJECT_SOURCE_DIR} AND WIN32)
 		  SET(CPACK_PACKAGE_NAME ${PROJECT_NAME})
 		  SET(CPACK_PACKAGE_VENDOR "EGRES")
 		  SET(CPACK_PACKAGE_DESCRIPTION_SUMMARY
 		    "LEMON - Library for Efficient Modeling and Optimization in Networks")
 		  SET(CPACK_RESOURCE_FILE_LICENSE "${PROJECT_SOURCE_DIR}/LICENSE")
 		  SET(CPACK_PACKAGE_VERSION ${PROJECT_VERSION})
 		  SET(CPACK_PACKAGE_INSTALL_DIRECTORY
 		    "${PROJECT_NAME} ${PROJECT_VERSION}")
 		  SET(CPACK_PACKAGE_INSTALL_REGISTRY_KEY
 		    "${PROJECT_NAME} ${PROJECT_VERSION}")
 		  SET(CPACK_COMPONENTS_ALL headers library html_documentation bin)
 		  SET(CPACK_COMPONENT_HEADERS_DISPLAY_NAME "C++ headers")
 		  SET(CPACK_COMPONENT_LIBRARY_DISPLAY_NAME "Dynamic-link library")
 		  SET(CPACK_COMPONENT_BIN_DISPLAY_NAME "Command line utilities")
 		  SET(CPACK_COMPONENT_HTML_DOCUMENTATION_DISPLAY_NAME "HTML documentation")
 		  SET(CPACK_COMPONENT_HEADERS_DESCRIPTION
 		    "C++ header files")
 		  SET(CPACK_COMPONENT_LIBRARY_DESCRIPTION
 		    "DLL and import library")
 		  SET(CPACK_COMPONENT_BIN_DESCRIPTION
 		    "Command line utilities")
 		  SET(CPACK_COMPONENT_HTML_DOCUMENTATION_DESCRIPTION
 		    "Doxygen generated documentation")
 		  SET(CPACK_COMPONENT_HEADERS_DEPENDS library)
 		  SET(CPACK_COMPONENT_HEADERS_GROUP "Development")
 		  SET(CPACK_COMPONENT_LIBRARY_GROUP "Development")
 		  SET(CPACK_COMPONENT_HTML_DOCUMENTATION_GROUP "Documentation")
 		  SET(CPACK_COMPONENT_GROUP_DEVELOPMENT_DESCRIPTION
 		    "Components needed to develop software using LEMON")
 		  SET(CPACK_COMPONENT_GROUP_DOCUMENTATION_DESCRIPTION
 		    "Documentation of LEMON")
 		  SET(CPACK_ALL_INSTALL_TYPES Full Developer)
 		  SET(CPACK_COMPONENT_HEADERS_INSTALL_TYPES Developer Full)
 		  SET(CPACK_COMPONENT_LIBRARY_INSTALL_TYPES Developer Full)
 		  SET(CPACK_COMPONENT_HTML_DOCUMENTATION_INSTALL_TYPES Full)
 		  SET(CPACK_GENERATOR "NSIS")
 		  SET(CPACK_NSIS_MUI_ICON "${PROJECT_SOURCE_DIR}/cmake/nsis/lemon.ico")
 		  SET(CPACK_NSIS_MUI_UNIICON "${PROJECT_SOURCE_DIR}/cmake/nsis/uninstall.ico")
 		  #SET(CPACK_PACKAGE_ICON "${PROJECT_SOURCE_DIR}/cmake/nsis\\\\installer.bmp")
 		  SET(CPACK_NSIS_INSTALLED_ICON_NAME "bin\\\\lemon.ico")
 		  SET(CPACK_NSIS_DISPLAY_NAME "${CPACK_PACKAGE_INSTALL_DIRECTORY} ${PROJECT_NAME}")
 		  SET(CPACK_NSIS_HELP_LINK "http:\\\\\\\\lemon.cs.elte.hu")
 		  SET(CPACK_NSIS_URL_INFO_ABOUT "http:\\\\\\\\lemon.cs.elte.hu")
 		  SET(CPACK_NSIS_CONTACT "lemon-user@lemon.cs.elte.hu")
 		  SET(CPACK_NSIS_CREATE_ICONS_EXTRA "
 		    CreateShortCut \\\"$SMPROGRAMS\\\\$STARTMENU_FOLDER\\\\Documentation.lnk\\\" \\\"$INSTDIR\\\\share\\\\doc\\\\index.html\\\"
 		    ")
 		  SET(CPACK_NSIS_DELETE_ICONS_EXTRA "
 		    !insertmacro MUI_STARTMENU_GETFOLDER Application $MUI_TEMP
 		    Delete \\\"$SMPROGRAMS\\\\$MUI_TEMP\\\\Documentation.lnk\\\"
 		    ")
 		  INCLUDE(CPack)
 		ENDIF()

Makefile.am

Show inline comments

 		ACLOCAL_AMFLAGS = -I m4
 		AM_CXXFLAGS = $(WARNINGCXXFLAGS)
 		AM_CPPFLAGS = -I$(top_srcdir) -I$(top_builddir)
 		LDADD = $(top_builddir)/lemon/libemon.la
 		EXTRA_DIST = \
 			AUTHORS \
 			LICENSE \
 			m4/lx_check_cplex.m4 \
 			m4/lx_check_glpk.m4 \
 			m4/lx_check_soplex.m4 \
 			m4/lx_check_coin.m4 \
 			CMakeLists.txt \
 			cmake/FindGhostscript.cmake \
 			cmake/FindCPLEX.cmake \
 			cmake/FindGLPK.cmake \
 			cmake/FindCOIN.cmake \
 			cmake/LEMONConfig.cmake.in \
 			cmake/version.cmake.in \
 			cmake/version.cmake \
 			cmake/nsis/lemon.ico \
 			cmake/nsis/uninstall.ico
 		pkgconfigdir = $(libdir)/pkgconfig
 		lemondir = $(pkgincludedir)
 		bitsdir = $(lemondir)/bits
 		conceptdir = $(lemondir)/concepts
 		pkgconfig_DATA =
 		lib_LTLIBRARIES =
 		lemon_HEADERS =
 		bits_HEADERS =
 		concept_HEADERS =
 		noinst_HEADERS =
 		noinst_PROGRAMS =
 		bin_PROGRAMS =
 		check_PROGRAMS =
 		dist_bin_SCRIPTS =
 		TESTS =
 		XFAIL_TESTS =
 		include lemon/Makefile.am
 		include test/Makefile.am
 		include doc/Makefile.am
 		include tools/Makefile.am
 		DIST_SUBDIRS = demo
 		demo:
 			$(MAKE) $(AM_MAKEFLAGS) -C demo
 		MRPROPERFILES = \
 			aclocal.m4 \
 			config.h.in \
 			config.h.in~ \
 			configure \
 			Makefile.in \
 			build-aux/config.guess \
 			build-aux/config.sub \
 			build-aux/depcomp \
 			build-aux/install-sh \
 			build-aux/ltmain.sh \
 			build-aux/missing \
 			doc/doxygen.log
 		mrproper:
 			$(MAKE) $(AM_MAKEFLAGS) maintainer-clean
 			-rm -f $(MRPROPERFILES)
 		dist-bz2: dist
 			zcat $(PACKAGE)-$(VERSION).tar.gz | \
 			bzip2 --best -c > $(PACKAGE)-$(VERSION).tar.bz2
 		distcheck-bz2: distcheck
 			zcat $(PACKAGE)-$(VERSION).tar.gz | \
 			bzip2 --best -c > $(PACKAGE)-$(VERSION).tar.bz2
 		.PHONY: demo mrproper dist-bz2 distcheck-bz2

configure.ac

Show inline comments

 		dnl Process this file with autoconf to produce a configure script.
 		dnl Version information.
 		m4_define([lemon_version_number],
 		          [m4_normalize(esyscmd([echo ${LEMON_VERSION}]))])
 		dnl m4_define([lemon_version_number], [])
 		m4_define([lemon_hg_path], [m4_normalize(esyscmd([./scripts/chg-len.py]))])
 		m4_define([lemon_hg_revision], [m4_normalize(esyscmd([hg id -i 2> /dev/null]))])
 		m4_define([lemon_version], [ifelse(lemon_version_number(),
 		                           [],
 		                           [ifelse(lemon_hg_revision(),
 		                           [],
 		                           [hg-tip],
 		                           [lemon_hg_path().lemon_hg_revision()])],
 		                           [lemon_version_number()])])
 		AC_PREREQ([2.59])
 		AC_INIT([LEMON], [lemon_version()], [lemon-user@lemon.cs.elte.hu], [lemon])
 		AC_CONFIG_AUX_DIR([build-aux])
 		AC_CONFIG_MACRO_DIR([m4])
 		AM_INIT_AUTOMAKE([-Wall -Werror foreign subdir-objects nostdinc])
 		AC_CONFIG_SRCDIR([lemon/list_graph.h])
 		AC_CONFIG_HEADERS([config.h lemon/config.h])
 		AC_DEFINE([LEMON_VERSION], [lemon_version()], [The version string])
 		dnl Do compilation tests using the C++ compiler.
 		AC_LANG([C++])
 		dnl Check the existence of long long type.
 		AC_CHECK_TYPE(long long, [long_long_found=yes], [long_long_found=no])
 		if test x"$long_long_found" = x"yes"; then
 		  AC_DEFINE([LEMON_HAVE_LONG_LONG], [1], [Define to 1 if you have long long.])
 		fi
 		dnl Checks for programs.
 		AC_PROG_CXX
 		AC_PROG_CXXCPP
 		AC_PROG_INSTALL
 		AC_DISABLE_SHARED
 		AC_PROG_LIBTOOL
 		AC_CHECK_PROG([doxygen_found],[doxygen],[yes],[no])
 		AC_CHECK_PROG([python_found],[python],[yes],[no])
 		AC_CHECK_PROG([gs_found],[gs],[yes],[no])
 		dnl Detect Intel compiler.
 		AC_MSG_CHECKING([whether we are using the Intel C++ compiler])
 		AC_COMPILE_IFELSE([#ifndef __INTEL_COMPILER
 		choke me
 		#endif], [ICC=[yes]], [ICC=[no]])
 		if test x"$ICC" = x"yes"; then
 		  AC_MSG_RESULT([yes])
 		else
 		  AC_MSG_RESULT([no])
 		fi
 		dnl Set custom compiler flags when using g++.
 		if test "$GXX" = yes -a "$ICC" = no; then
 		  WARNINGCXXFLAGS="-Wall -W -Wall -W -Wunused -Wformat=2 -Wctor-dtor-privacy -Wnon-virtual-dtor -Wno-char-subscripts -Wwrite-strings -Wno-char-subscripts -Wreturn-type -Wcast-qual -Wcast-align -Wsign-promo -Woverloaded-virtual -ansi -fno-strict-aliasing -Wold-style-cast -Wno-unknown-pragmas"
 		fi
 		AC_SUBST([WARNINGCXXFLAGS])
 		dnl Checks for libraries.
 		LX_CHECK_GLPK
 		LX_CHECK_CPLEX
 		LX_CHECK_SOPLEX
 		LX_CHECK_COIN
 		AM_CONDITIONAL([HAVE_LP], [test x"$lx_lp_found" = x"yes"])
 		AM_CONDITIONAL([HAVE_MIP], [test x"$lx_mip_found" = x"yes"])
 		dnl Disable/enable building the binary tools.
 		AC_ARG_ENABLE([tools],
 		AS_HELP_STRING([--enable-tools], [build additional tools @<:@default@:>@])
 		AS_HELP_STRING([--disable-tools], [do not build additional tools]),
 		              [], [enable_tools=yes])
 		AC_MSG_CHECKING([whether to build the additional tools])
 		if test x"$enable_tools" != x"no"; then
 		  AC_MSG_RESULT([yes])
 		else
 		  AC_MSG_RESULT([no])
 		fi
 		AM_CONDITIONAL([WANT_TOOLS], [test x"$enable_tools" != x"no"])
 		dnl Checks for header files.
 		AC_CHECK_HEADERS(limits.h sys/time.h sys/times.h unistd.h)
 		dnl Checks for typedefs, structures, and compiler characteristics.
 		AC_C_CONST
 		AC_C_INLINE
 		AC_TYPE_SIZE_T
 		AC_HEADER_TIME
 		AC_STRUCT_TM
 		dnl Checks for library functions.
 		AC_HEADER_STDC
 		AC_CHECK_FUNCS(gettimeofday times ctime_r)
 		dnl Add dependencies on files generated by configure.
 		AC_SUBST([CONFIG_STATUS_DEPENDENCIES],
 		  ['$(top_srcdir)/doc/Doxyfile.in $(top_srcdir)/lemon/lemon.pc.in $(top_srcdir)/cmake/version.cmake.in'])
 		AC_CONFIG_FILES([
 		Makefile
 		demo/Makefile
 		cmake/version.cmake
 		doc/Doxyfile
 		lemon/lemon.pc
 		])
 		AC_OUTPUT
 		echo
 		echo '****************************** SUMMARY ******************************'
 		echo
 		echo Package version............... : $PACKAGE-$VERSION
 		echo
 		echo C++ compiler.................. : $CXX
 		echo C++ compiles flags............ : $WARNINGCXXFLAGS $CXXFLAGS
 		echo
 		echo Compiler supports long long... : $long_long_found
 		echo
 		echo GLPK support.................. : $lx_glpk_found
 		echo CPLEX support................. : $lx_cplex_found
 		echo SOPLEX support................ : $lx_soplex_found
 		echo CLP support................... : $lx_clp_found
 		echo CBC support................... : $lx_cbc_found
 		echo
 		echo Build additional tools........ : $enable_tools
 		echo
 		echo The packace will be installed in
 		echo -n '  '
 		echo $prefix.
 		echo
 		echo '*********************************************************************'
 		echo
 		echo Configure complete, now type \'make\' and then \'make install\'.
 		echo

doc/CMakeLists.txt

Show inline comments

 		SET(PACKAGE_NAME ${PROJECT_NAME})
 		SET(PACKAGE_VERSION ${PROJECT_VERSION})
 		SET(abs_top_srcdir ${PROJECT_SOURCE_DIR})
 		SET(abs_top_builddir ${PROJECT_BINARY_DIR})
 		CONFIGURE_FILE(
 		  ${PROJECT_SOURCE_DIR}/doc/Doxyfile.in
 		  ${PROJECT_BINARY_DIR}/doc/Doxyfile
 		  @ONLY
+		)
 		IF(DOXYGEN_EXECUTABLE AND GHOSTSCRIPT_EXECUTABLE)
+		IF(DOXYGEN_EXECUTABLE AND PYTHONINTERP_FOUND AND GHOSTSCRIPT_EXECUTABLE)
 		  FILE(MAKE_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/html/)
 		  SET(GHOSTSCRIPT_OPTIONS -dNOPAUSE -dBATCH -q -dEPSCrop -dTextAlphaBits=4 -dGraphicsAlphaBits=4 -sDEVICE=pngalpha)
 		  ADD_CUSTOM_TARGET(html
 		    COMMAND ${CMAKE_COMMAND} -E remove_directory gen-images
 		    COMMAND ${CMAKE_COMMAND} -E make_directory gen-images
 		    COMMAND ${GHOSTSCRIPT_EXECUTABLE} ${GHOSTSCRIPT_OPTIONS} -r18 -sOutputFile=gen-images/bipartite_matching.png ${CMAKE_CURRENT_SOURCE_DIR}/images/bipartite_matching.eps
 		    COMMAND ${GHOSTSCRIPT_EXECUTABLE} ${GHOSTSCRIPT_OPTIONS} -r18 -sOutputFile=gen-images/bipartite_partitions.png ${CMAKE_CURRENT_SOURCE_DIR}/images/bipartite_partitions.eps
 		    COMMAND ${GHOSTSCRIPT_EXECUTABLE} ${GHOSTSCRIPT_OPTIONS} -r18 -sOutputFile=gen-images/connected_components.png ${CMAKE_CURRENT_SOURCE_DIR}/images/connected_components.eps
 		    COMMAND ${GHOSTSCRIPT_EXECUTABLE} ${GHOSTSCRIPT_OPTIONS} -r18 -sOutputFile=gen-images/edge_biconnected_components.png ${CMAKE_CURRENT_SOURCE_DIR}/images/edge_biconnected_components.eps
 		    COMMAND ${GHOSTSCRIPT_EXECUTABLE} ${GHOSTSCRIPT_OPTIONS} -r18 -sOutputFile=gen-images/grid_graph.png ${CMAKE_CURRENT_SOURCE_DIR}/images/grid_graph.eps
 		    COMMAND ${GHOSTSCRIPT_EXECUTABLE} ${GHOSTSCRIPT_OPTIONS} -r18 -sOutputFile=gen-images/node_biconnected_components.png ${CMAKE_CURRENT_SOURCE_DIR}/images/node_biconnected_components.eps
 		    COMMAND ${GHOSTSCRIPT_EXECUTABLE} ${GHOSTSCRIPT_OPTIONS} -r18 -sOutputFile=gen-images/nodeshape_0.png ${CMAKE_CURRENT_SOURCE_DIR}/images/nodeshape_0.eps
 		    COMMAND ${GHOSTSCRIPT_EXECUTABLE} ${GHOSTSCRIPT_OPTIONS} -r18 -sOutputFile=gen-images/nodeshape_1.png ${CMAKE_CURRENT_SOURCE_DIR}/images/nodeshape_1.eps
 		    COMMAND ${GHOSTSCRIPT_EXECUTABLE} ${GHOSTSCRIPT_OPTIONS} -r18 -sOutputFile=gen-images/nodeshape_2.png ${CMAKE_CURRENT_SOURCE_DIR}/images/nodeshape_2.eps
 		    COMMAND ${GHOSTSCRIPT_EXECUTABLE} ${GHOSTSCRIPT_OPTIONS} -r18 -sOutputFile=gen-images/nodeshape_3.png ${CMAKE_CURRENT_SOURCE_DIR}/images/nodeshape_3.eps
 		    COMMAND ${GHOSTSCRIPT_EXECUTABLE} ${GHOSTSCRIPT_OPTIONS} -r18 -sOutputFile=gen-images/nodeshape_4.png ${CMAKE_CURRENT_SOURCE_DIR}/images/nodeshape_4.eps
 		    COMMAND ${GHOSTSCRIPT_EXECUTABLE} ${GHOSTSCRIPT_OPTIONS} -r18 -sOutputFile=gen-images/strongly_connected_components.png ${CMAKE_CURRENT_SOURCE_DIR}/images/strongly_connected_components.eps
 		    COMMAND ${CMAKE_COMMAND} -E remove_directory html
 		    COMMAND ${PYTHON_EXECUTABLE} ${PROJECT_SOURCE_DIR}/scripts/bib2dox.py ${CMAKE_CURRENT_SOURCE_DIR}/references.bib >references.dox
 		    COMMAND ${DOXYGEN_EXECUTABLE} Doxyfile
 		    WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+		  )
 		  SET_TARGET_PROPERTIES(html PROPERTIES PROJECT_LABEL BUILD_DOC)
 		  IF(UNIX)
 		    INSTALL(
 		      DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/html/
 		      DESTINATION share/doc/lemon/html
 		      COMPONENT html_documentation
+		    )
 		  ELSEIF(WIN32)
 		    INSTALL(
 		      DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/html/
 		      DESTINATION doc
 		      COMPONENT html_documentation
+		    )
 		  ENDIF()
 		ENDIF()

doc/Doxyfile.in

Show inline comments

-		# Doxyfile 1.5.7.1
+		# Doxyfile 1.5.9
 		#---------------------------------------------------------------------------
 		# Project related configuration options
 		#---------------------------------------------------------------------------
 		DOXYFILE_ENCODING      = UTF-8
 		PROJECT_NAME           = @PACKAGE_NAME@
 		PROJECT_NUMBER         = @PACKAGE_VERSION@
 		OUTPUT_DIRECTORY       =
 		CREATE_SUBDIRS         = NO
 		OUTPUT_LANGUAGE        = English
 		BRIEF_MEMBER_DESC      = YES
 		REPEAT_BRIEF           = NO
 		ABBREVIATE_BRIEF       =
 		ALWAYS_DETAILED_SEC    = NO
 		INLINE_INHERITED_MEMB  = NO
 		FULL_PATH_NAMES        = YES
 		STRIP_FROM_PATH        = "@abs_top_srcdir@"
 		STRIP_FROM_INC_PATH    = "@abs_top_srcdir@"
 		SHORT_NAMES            = YES
 		JAVADOC_AUTOBRIEF      = NO
 		QT_AUTOBRIEF           = NO
 		MULTILINE_CPP_IS_BRIEF = NO
 		DETAILS_AT_TOP         = YES
 		INHERIT_DOCS           = NO
 		SEPARATE_MEMBER_PAGES  = NO
 		TAB_SIZE               = 8
 		ALIASES                =
 		OPTIMIZE_OUTPUT_FOR_C  = NO
 		OPTIMIZE_OUTPUT_JAVA   = NO
 		OPTIMIZE_FOR_FORTRAN   = NO
 		OPTIMIZE_OUTPUT_VHDL   = NO
 		BUILTIN_STL_SUPPORT    = YES
 		CPP_CLI_SUPPORT        = NO
 		SIP_SUPPORT            = NO
 		IDL_PROPERTY_SUPPORT   = YES
 		DISTRIBUTE_GROUP_DOC   = NO
 		SUBGROUPING            = YES
 		TYPEDEF_HIDES_STRUCT   = NO
 		SYMBOL_CACHE_SIZE      = 0
 		#---------------------------------------------------------------------------
 		# Build related configuration options
 		#---------------------------------------------------------------------------
 		EXTRACT_ALL            = NO
 		EXTRACT_PRIVATE        = YES
 		EXTRACT_STATIC         = YES
 		EXTRACT_LOCAL_CLASSES  = NO
 		EXTRACT_LOCAL_METHODS  = NO
 		EXTRACT_ANON_NSPACES   = NO
 		HIDE_UNDOC_MEMBERS     = YES
 		HIDE_UNDOC_CLASSES     = YES
 		HIDE_FRIEND_COMPOUNDS  = NO
 		HIDE_IN_BODY_DOCS      = NO
 		INTERNAL_DOCS          = NO
 		CASE_SENSE_NAMES       = YES
 		HIDE_SCOPE_NAMES       = YES
 		SHOW_INCLUDE_FILES     = YES
 		INLINE_INFO            = YES
 		SORT_MEMBER_DOCS       = NO
 		SORT_BRIEF_DOCS        = NO
 		SORT_GROUP_NAMES       = NO
 		SORT_BY_SCOPE_NAME     = NO
 		GENERATE_TODOLIST      = YES
 		GENERATE_TESTLIST      = YES
 		GENERATE_BUGLIST       = YES
 		GENERATE_DEPRECATEDLIST= YES
 		ENABLED_SECTIONS       =
 		MAX_INITIALIZER_LINES  = 5
 		SHOW_USED_FILES        = NO
 		SHOW_DIRECTORIES       = YES
 		SHOW_FILES             = YES
 		SHOW_NAMESPACES        = YES
 		FILE_VERSION_FILTER    =
 		LAYOUT_FILE            = DoxygenLayout.xml
 		#---------------------------------------------------------------------------
 		# configuration options related to warning and progress messages
 		#---------------------------------------------------------------------------
 		QUIET                  = NO
 		WARNINGS               = YES
 		WARN_IF_UNDOCUMENTED   = YES
 		WARN_IF_DOC_ERROR      = YES
 		WARN_NO_PARAMDOC       = NO
 		WARN_FORMAT            = "$file:$line: $text"
 		WARN_LOGFILE           = doxygen.log
 		#---------------------------------------------------------------------------
 		# configuration options related to the input files
 		#---------------------------------------------------------------------------
 		INPUT                  = "@abs_top_srcdir@/doc" \
 		                         "@abs_top_srcdir@/lemon" \
 		                         "@abs_top_srcdir@/lemon/bits" \
 		                         "@abs_top_srcdir@/lemon/concepts" \
 		                         "@abs_top_srcdir@/demo" \
 		                         "@abs_top_srcdir@/tools" \
 		                         "@abs_top_srcdir@/test/test_tools.h"
+		                         "@abs_top_srcdir@/test/test_tools.h" \
 		                         "@abs_top_builddir@/doc/references.dox"
 		INPUT_ENCODING         = UTF-8
 		FILE_PATTERNS          = *.h \
 		                         *.cc \
 		                         *.dox
 		RECURSIVE              = NO
 		EXCLUDE                =
 		EXCLUDE_SYMLINKS       = NO
 		EXCLUDE_PATTERNS       =
 		EXCLUDE_SYMBOLS        =
 		EXAMPLE_PATH           = "@abs_top_srcdir@/demo" \
 		                         "@abs_top_srcdir@/LICENSE" \
 		                         "@abs_top_srcdir@/doc"
 		EXAMPLE_PATTERNS       =
 		EXAMPLE_RECURSIVE      = NO
 		IMAGE_PATH             = "@abs_top_srcdir@/doc/images" \
 		                         "@abs_top_builddir@/doc/gen-images"
 		INPUT_FILTER           =
 		FILTER_PATTERNS        =
 		FILTER_SOURCE_FILES    = NO
 		#---------------------------------------------------------------------------
 		# configuration options related to source browsing
 		#---------------------------------------------------------------------------
 		SOURCE_BROWSER         = NO
 		INLINE_SOURCES         = NO
 		STRIP_CODE_COMMENTS    = YES
 		REFERENCED_BY_RELATION = NO
 		REFERENCES_RELATION    = NO
 		REFERENCES_LINK_SOURCE = YES
 		USE_HTAGS              = NO
 		VERBATIM_HEADERS       = NO
 		#---------------------------------------------------------------------------
 		# configuration options related to the alphabetical class index
 		#---------------------------------------------------------------------------
 		ALPHABETICAL_INDEX     = YES
 		COLS_IN_ALPHA_INDEX    = 2
 		IGNORE_PREFIX          =
 		#---------------------------------------------------------------------------
 		# configuration options related to the HTML output
 		#---------------------------------------------------------------------------
 		GENERATE_HTML          = YES
 		HTML_OUTPUT            = html
 		HTML_FILE_EXTENSION    = .html
 		HTML_HEADER            =
 		HTML_FOOTER            =
 		HTML_STYLESHEET        =
 		HTML_ALIGN_MEMBERS     = YES
 		HTML_DYNAMIC_SECTIONS  = NO
 		GENERATE_DOCSET        = NO
 		DOCSET_FEEDNAME        = "Doxygen generated docs"
 		DOCSET_BUNDLE_ID       = org.doxygen.Project
 		GENERATE_HTMLHELP      = NO
 		CHM_FILE               =
 		HHC_LOCATION           =
 		GENERATE_CHI           = NO
 		CHM_INDEX_ENCODING     =
 		BINARY_TOC             = NO
 		TOC_EXPAND             = NO
 		GENERATE_QHP           = NO
 		QCH_FILE               =
 		QHP_NAMESPACE          = org.doxygen.Project
 		QHP_VIRTUAL_FOLDER     = doc
 		QHG_LOCATION           =
 		DISABLE_INDEX          = NO
 		ENUM_VALUES_PER_LINE   = 4
 		GENERATE_TREEVIEW      = NO
 		TREEVIEW_WIDTH         = 250
 		FORMULA_FONTSIZE       = 10
 		#---------------------------------------------------------------------------
 		# configuration options related to the LaTeX output
 		#---------------------------------------------------------------------------
 		GENERATE_LATEX         = NO
 		LATEX_OUTPUT           = latex
 		LATEX_CMD_NAME         = latex
 		MAKEINDEX_CMD_NAME     = makeindex
 		COMPACT_LATEX          = YES
 		PAPER_TYPE             = a4wide
 		EXTRA_PACKAGES         = amsmath \
 		                         amssymb
 		LATEX_HEADER           =
 		PDF_HYPERLINKS         = YES
 		USE_PDFLATEX           = YES
 		LATEX_BATCHMODE        = NO
 		LATEX_HIDE_INDICES     = NO
 		#---------------------------------------------------------------------------
 		# configuration options related to the RTF output
 		#---------------------------------------------------------------------------
 		GENERATE_RTF           = NO
 		RTF_OUTPUT             = rtf
 		COMPACT_RTF            = NO
 		RTF_HYPERLINKS         = NO
 		RTF_STYLESHEET_FILE    =
 		RTF_EXTENSIONS_FILE    =
 		#---------------------------------------------------------------------------
 		# configuration options related to the man page output
 		#---------------------------------------------------------------------------
 		GENERATE_MAN           = NO
 		MAN_OUTPUT             = man
 		MAN_EXTENSION          = .3
 		MAN_LINKS              = NO
 		#---------------------------------------------------------------------------
 		# configuration options related to the XML output
 		#---------------------------------------------------------------------------
 		GENERATE_XML           = NO
 		XML_OUTPUT             = xml
 		XML_SCHEMA             =
 		XML_DTD                =
 		XML_PROGRAMLISTING     = YES
 		#---------------------------------------------------------------------------
 		# configuration options for the AutoGen Definitions output
 		#---------------------------------------------------------------------------
 		GENERATE_AUTOGEN_DEF   = NO
 		#---------------------------------------------------------------------------
 		# configuration options related to the Perl module output
 		#---------------------------------------------------------------------------
 		GENERATE_PERLMOD       = NO
 		PERLMOD_LATEX          = NO
 		PERLMOD_PRETTY         = YES
 		PERLMOD_MAKEVAR_PREFIX =
 		#---------------------------------------------------------------------------
 		# Configuration options related to the preprocessor
 		#---------------------------------------------------------------------------
 		ENABLE_PREPROCESSING   = YES
 		MACRO_EXPANSION        = NO
 		EXPAND_ONLY_PREDEF     = NO
 		SEARCH_INCLUDES        = YES
 		INCLUDE_PATH           =
 		INCLUDE_FILE_PATTERNS  =
 		PREDEFINED             = DOXYGEN
 		EXPAND_AS_DEFINED      =
 		SKIP_FUNCTION_MACROS   = YES
 		#---------------------------------------------------------------------------
-		# Configuration::additions related to external references
+		# Options related to the search engine
 		#---------------------------------------------------------------------------
 		TAGFILES               = "@abs_top_srcdir@/doc/libstdc++.tag = http://gcc.gnu.org/onlinedocs/libstdc++/latest-doxygen/  "
 		GENERATE_TAGFILE       = html/lemon.tag
 		ALLEXTERNALS           = NO
 		EXTERNAL_GROUPS        = NO
 		PERL_PATH              = /usr/bin/perl
 		#---------------------------------------------------------------------------
 		# Configuration options related to the dot tool
 		#---------------------------------------------------------------------------
 		CLASS_DIAGRAMS         = YES
 		MSCGEN_PATH            =
 		HIDE_UNDOC_RELATIONS   = YES
 		HAVE_DOT               = YES
 		DOT_FONTNAME           = FreeSans
 		DOT_FONTSIZE           = 10
 		DOT_FONTPATH           =
 		CLASS_GRAPH            = YES
 		COLLABORATION_GRAPH    = NO
 		GROUP_GRAPHS           = NO
 		UML_LOOK               = NO
 		TEMPLATE_RELATIONS     = NO
 		INCLUDE_GRAPH          = NO
 		INCLUDED_BY_GRAPH      = NO
 		CALL_GRAPH             = NO
 		CALLER_GRAPH           = NO
 		GRAPHICAL_HIERARCHY    = NO
 		DIRECTORY_GRAPH        = NO
 		DOT_IMAGE_FORMAT       = png
 		DOT_PATH               =
 		DOTFILE_DIRS           =
 		DOT_GRAPH_MAX_NODES    = 50
 		MAX_DOT_GRAPH_DEPTH    = 0
 		DOT_TRANSPARENT        = NO
 		DOT_MULTI_TARGETS      = NO
 		GENERATE_LEGEND        = YES
 		DOT_CLEANUP            = YES
 		#---------------------------------------------------------------------------
 		# Configuration::additions related to the search engine
 		#---------------------------------------------------------------------------
 		SEARCHENGINE           = NO

doc/Makefile.am

Show inline comments

 		EXTRA_DIST += \
 			doc/Doxyfile.in \
 			doc/DoxygenLayout.xml \
 			doc/coding_style.dox \
 			doc/dirs.dox \
 			doc/groups.dox \
 			doc/lgf.dox \
 			doc/license.dox \
 			doc/mainpage.dox \
 			doc/migration.dox \
 			doc/min_cost_flow.dox \
 			doc/named-param.dox \
 			doc/namespaces.dox \
 			doc/html \
 			doc/CMakeLists.txt
 		DOC_EPS_IMAGES18 = \
 			grid_graph.eps \
 			nodeshape_0.eps \
 			nodeshape_1.eps \
 			nodeshape_2.eps \
 			nodeshape_3.eps \
 			nodeshape_4.eps
 		DOC_EPS_IMAGES27 = \
 			bipartite_matching.eps \
 			bipartite_partitions.eps \
 			connected_components.eps \
 			edge_biconnected_components.eps \
 			node_biconnected_components.eps \
 			strongly_connected_components.eps
 		DOC_EPS_IMAGES = \
 			$(DOC_EPS_IMAGES18) \
 			$(DOC_EPS_IMAGES27)
 		DOC_PNG_IMAGES = \
 			$(DOC_EPS_IMAGES:%.eps=doc/gen-images/%.png)
 		EXTRA_DIST += $(DOC_EPS_IMAGES:%=doc/images/%)
 		doc/html:
 			$(MAKE) $(AM_MAKEFLAGS) html
 		GS_COMMAND=gs -dNOPAUSE -dBATCH -q -dEPSCrop -dTextAlphaBits=4 -dGraphicsAlphaBits=4
 		$(DOC_EPS_IMAGES18:%.eps=doc/gen-images/%.png): doc/gen-images/%.png: doc/images/%.eps
 			-mkdir doc/gen-images
 			if test ${gs_found} = yes; then \
 			  $(GS_COMMAND) -sDEVICE=pngalpha -r18 -sOutputFile=$@ $<; \
 			else \
 			  echo; \
 			  echo "Ghostscript not found."; \
 			  echo; \
 			  exit 1; \
 			fi
 		$(DOC_EPS_IMAGES27:%.eps=doc/gen-images/%.png): doc/gen-images/%.png: doc/images/%.eps
 			-mkdir doc/gen-images
 			if test ${gs_found} = yes; then \
 			  $(GS_COMMAND) -sDEVICE=pngalpha -r27 -sOutputFile=$@ $<; \
 			else \
 			  echo; \
 			  echo "Ghostscript not found."; \
 			  echo; \
 			  exit 1; \
 			fi
-		html-local: $(DOC_PNG_IMAGES)
+		references.dox: doc/references.bib
 			if test ${python_found} = yes; then \
 			  cd doc; \
 			  python @abs_top_srcdir@/scripts/bib2dox.py @abs_top_builddir@/$< >$@; \
 			  cd ..; \
 			else \
 			  echo; \
 			  echo "Python not found."; \
 			  echo; \
 			  exit 1; \
 			fi
 		html-local: $(DOC_PNG_IMAGES) references.dox
 			if test ${doxygen_found} = yes; then \
 			  cd doc; \
 			  doxygen Doxyfile; \
 			  cd ..; \
 			else \
 			  echo; \
 			  echo "Doxygen not found."; \
 			  echo; \
 			  exit 1; \
 			fi
 		clean-local:
 			-rm -rf doc/html
 			-rm -f doc/doxygen.log
 			-rm -f $(DOC_PNG_IMAGES)
 			-rm -rf doc/gen-images
 		update-external-tags:
 			wget -O doc/libstdc++.tag.tmp http://gcc.gnu.org/onlinedocs/libstdc++/latest-doxygen/libstdc++.tag && \
 			mv doc/libstdc++.tag.tmp doc/libstdc++.tag || \
 			rm doc/libstdc++.tag.tmp
 		install-html-local: doc/html
 			@$(NORMAL_INSTALL)
 			$(mkinstalldirs) $(DESTDIR)$(htmldir)/html
 			for p in doc/html/*.{html,css,png,map,gif,tag} ; do \
 			  f="`echo $$p | sed -e 's|^.*/||'`"; \
 			  echo " $(INSTALL_DATA) $$p $(DESTDIR)$(htmldir)/html/$$f"; \
 			  $(INSTALL_DATA) $$p $(DESTDIR)$(htmldir)/html/$$f; \
 			done
 		uninstall-local:
 			@$(NORMAL_UNINSTALL)
 			for p in doc/html/*.{html,css,png,map,gif,tag} ; do \
 			  f="`echo $$p | sed -e 's|^.*/||'`"; \
 			  echo " rm -f $(DESTDIR)$(htmldir)/html/$$f"; \
 			  rm -f $(DESTDIR)$(htmldir)/html/$$f; \
 			done
 		.PHONY: update-external-tags

doc/groups.dox

Show inline comments

@@ -63,653 +63,703 @@
 		/**
 		@defgroup graph_adaptors Adaptor Classes for Graphs
 		@ingroup graphs
 		\brief Adaptor classes for digraphs and graphs
 		This group contains several useful adaptor classes for digraphs and graphs.
 		The main parts of LEMON are the different graph structures, generic
 		graph algorithms, graph concepts, which couple them, and graph
 		adaptors. While the previous notions are more or less clear, the
 		latter one needs further explanation. Graph adaptors are graph classes
 		which serve for considering graph structures in different ways.
 		A short example makes this much clearer.  Suppose that we have an
 		instance \c g of a directed graph type, say ListDigraph and an algorithm
 		\code
 		template <typename Digraph>
 		int algorithm(const Digraph&);
 		\endcode
 		is needed to run on the reverse oriented graph.  It may be expensive
 		(in time or in memory usage) to copy \c g with the reversed
 		arcs.  In this case, an adaptor class is used, which (according
 		to LEMON \ref concepts::Digraph "digraph concepts") works as a digraph.
 		The adaptor uses the original digraph structure and digraph operations when
 		methods of the reversed oriented graph are called.  This means that the adaptor
 		have minor memory usage, and do not perform sophisticated algorithmic
 		actions.  The purpose of it is to give a tool for the cases when a
 		graph have to be used in a specific alteration.  If this alteration is
 		obtained by a usual construction like filtering the node or the arc set or
 		considering a new orientation, then an adaptor is worthwhile to use.
 		To come back to the reverse oriented graph, in this situation
 		\code
 		template<typename Digraph> class ReverseDigraph;
 		\endcode
 		template class can be used. The code looks as follows
 		\code
 		ListDigraph g;
 		ReverseDigraph<ListDigraph> rg(g);
 		int result = algorithm(rg);
 		\endcode
 		During running the algorithm, the original digraph \c g is untouched.
 		This techniques give rise to an elegant code, and based on stable
 		graph adaptors, complex algorithms can be implemented easily.
 		In flow, circulation and matching problems, the residual
 		graph is of particular importance. Combining an adaptor implementing
 		this with shortest path algorithms or minimum mean cycle algorithms,
 		a range of weighted and cardinality optimization algorithms can be
 		obtained. For other examples, the interested user is referred to the
 		detailed documentation of particular adaptors.
 		The behavior of graph adaptors can be very different. Some of them keep
 		capabilities of the original graph while in other cases this would be
 		meaningless. This means that the concepts that they meet depend
 		on the graph adaptor, and the wrapped graph.
 		For example, if an arc of a reversed digraph is deleted, this is carried
 		out by deleting the corresponding arc of the original digraph, thus the
 		adaptor modifies the original digraph.
 		However in case of a residual digraph, this operation has no sense.
 		Let us stand one more example here to simplify your work.
 		ReverseDigraph has constructor
 		\code
 		ReverseDigraph(Digraph& digraph);
 		\endcode
 		This means that in a situation, when a <tt>const %ListDigraph&</tt>
 		reference to a graph is given, then it have to be instantiated with
 		<tt>Digraph=const %ListDigraph</tt>.
 		\code
 		int algorithm1(const ListDigraph& g) {
 		  ReverseDigraph<const ListDigraph> rg(g);
 		  return algorithm2(rg);
+		}
 		\endcode
 		*/
 		/**
 		@defgroup maps Maps
 		@ingroup datas
 		\brief Map structures implemented in LEMON.
 		This group contains the map structures implemented in LEMON.
 		LEMON provides several special purpose maps and map adaptors that e.g. combine
 		new maps from existing ones.
 		<b>See also:</b> \ref map_concepts "Map Concepts".
 		*/
 		/**
 		@defgroup graph_maps Graph Maps
 		@ingroup maps
 		\brief Special graph-related maps.
 		This group contains maps that are specifically designed to assign
 		values to the nodes and arcs/edges of graphs.
 		If you are looking for the standard graph maps (\c NodeMap, \c ArcMap,
 		\c EdgeMap), see the \ref graph_concepts "Graph Structure Concepts".
 		*/
 		/**
 		\defgroup map_adaptors Map Adaptors
 		\ingroup maps
 		\brief Tools to create new maps from existing ones
 		This group contains map adaptors that are used to create "implicit"
 		maps from other maps.
 		Most of them are \ref concepts::ReadMap "read-only maps".
 		They can make arithmetic and logical operations between one or two maps
 		(negation, shifting, addition, multiplication, logical 'and', 'or',
 		'not' etc.) or e.g. convert a map to another one of different Value type.
 		The typical usage of this classes is passing implicit maps to
 		algorithms.  If a function type algorithm is called then the function
 		type map adaptors can be used comfortable. For example let's see the
 		usage of map adaptors with the \c graphToEps() function.
 		\code
 		  Color nodeColor(int deg) {
 		    if (deg >= 2) {
 		      return Color(0.5, 0.0, 0.5);
 		    } else if (deg == 1) {
 		      return Color(1.0, 0.5, 1.0);
 		    } else {
 		      return Color(0.0, 0.0, 0.0);
+		    }
+		  }
 		  Digraph::NodeMap<int> degree_map(graph);
 		  graphToEps(graph, "graph.eps")
 		    .coords(coords).scaleToA4().undirected()
 		    .nodeColors(composeMap(functorToMap(nodeColor), degree_map))
 		    .run();
 		\endcode
 		The \c functorToMap() function makes an \c int to \c Color map from the
 		\c nodeColor() function. The \c composeMap() compose the \c degree_map
 		and the previously created map. The composed map is a proper function to
 		get the color of each node.
 		The usage with class type algorithms is little bit harder. In this
 		case the function type map adaptors can not be used, because the
 		function map adaptors give back temporary objects.
 		\code
 		  Digraph graph;
 		  typedef Digraph::ArcMap<double> DoubleArcMap;
 		  DoubleArcMap length(graph);
 		  DoubleArcMap speed(graph);
 		  typedef DivMap<DoubleArcMap, DoubleArcMap> TimeMap;
 		  TimeMap time(length, speed);
 		  Dijkstra<Digraph, TimeMap> dijkstra(graph, time);
 		  dijkstra.run(source, target);
 		\endcode
 		We have a length map and a maximum speed map on the arcs of a digraph.
 		The minimum time to pass the arc can be calculated as the division of
 		the two maps which can be done implicitly with the \c DivMap template
 		class. We use the implicit minimum time map as the length map of the
 		\c Dijkstra algorithm.
 		*/
 		/**
 		@defgroup paths Path Structures
 		@ingroup datas
 		\brief %Path structures implemented in LEMON.
 		This group contains the path structures implemented in LEMON.
 		LEMON provides flexible data structures to work with paths.
 		All of them have similar interfaces and they can be copied easily with
 		assignment operators and copy constructors. This makes it easy and
 		efficient to have e.g. the Dijkstra algorithm to store its result in
 		any kind of path structure.
 		\sa \ref concepts::Path "Path concept"
 		*/
 		/**
 		@defgroup heaps Heap Structures
 		@ingroup datas
 		\brief %Heap structures implemented in LEMON.
 		This group contains the heap structures implemented in LEMON.
 		LEMON provides several heap classes. They are efficient implementations
 		of the abstract data type \e priority \e queue. They store items with
 		specified values called \e priorities in such a way that finding and
 		removing the item with minimum priority are efficient.
 		The basic operations are adding and erasing items, changing the priority
 		of an item, etc.
 		Heaps are crucial in several algorithms, such as Dijkstra and Prim.
 		The heap implementations have the same interface, thus any of them can be
 		used easily in such algorithms.
 		\sa \ref concepts::Heap "Heap concept"
 		*/
 		/**
 		@defgroup matrices Matrices
 		@ingroup datas
 		\brief Two dimensional data storages implemented in LEMON.
 		This group contains two dimensional data storages implemented in LEMON.
 		*/
 		/**
 		@defgroup auxdat Auxiliary Data Structures
 		@ingroup datas
 		\brief Auxiliary data structures implemented in LEMON.
 		This group contains some data structures implemented in LEMON in
 		order to make it easier to implement combinatorial algorithms.
 		*/
 		/**
 		@defgroup geomdat Geometric Data Structures
 		@ingroup auxdat
 		\brief Geometric data structures implemented in LEMON.
 		This group contains geometric data structures implemented in LEMON.
 		 - \ref lemon::dim2::Point "dim2::Point" implements a two dimensional
 		   vector with the usual operations.
 		 - \ref lemon::dim2::Box "dim2::Box" can be used to determine the
 		   rectangular bounding box of a set of \ref lemon::dim2::Point
 		   "dim2::Point"'s.
 		*/
 		/**
 		@defgroup matrices Matrices
 		@ingroup auxdat
 		\brief Two dimensional data storages implemented in LEMON.
 		This group contains two dimensional data storages implemented in LEMON.
 		*/
 		/**
 		@defgroup algs Algorithms
 		\brief This group contains the several algorithms
 		implemented in LEMON.
 		This group contains the several algorithms
 		implemented in LEMON.
 		*/
 		/**
 		@defgroup search Graph Search
 		@ingroup algs
 		\brief Common graph search algorithms.
 		This group contains the common graph search algorithms, namely
-		\e breadth-first \e search (BFS) and \e depth-first \e search (DFS).
 		\e breadth-first \e search (BFS) and \e depth-first \e search (DFS)
 		\ref clrs01algorithms.
 		*/
 		/**
 		@defgroup shortest_path Shortest Path Algorithms
 		@ingroup algs
 		\brief Algorithms for finding shortest paths.
-		This group contains the algorithms for finding shortest paths in digraphs.
 		This group contains the algorithms for finding shortest paths in digraphs
 		\ref clrs01algorithms.
 		 - \ref Dijkstra algorithm for finding shortest paths from a source node
 		   when all arc lengths are non-negative.
 		 - \ref BellmanFord "Bellman-Ford" algorithm for finding shortest paths
 		   from a source node when arc lenghts can be either positive or negative,
 		   but the digraph should not contain directed cycles with negative total
 		   length.
 		 - \ref FloydWarshall "Floyd-Warshall" and \ref Johnson "Johnson" algorithms
 		   for solving the \e all-pairs \e shortest \e paths \e problem when arc
 		   lenghts can be either positive or negative, but the digraph should
 		   not contain directed cycles with negative total length.
 		 - \ref Suurballe A successive shortest path algorithm for finding
 		   arc-disjoint paths between two nodes having minimum total length.
 		*/
 		/**
 		@defgroup spantree Minimum Spanning Tree Algorithms
 		@ingroup algs
 		\brief Algorithms for finding minimum cost spanning trees and arborescences.
 		This group contains the algorithms for finding minimum cost spanning
 		trees and arborescences.
+		trees and arborescences \ref clrs01algorithms.
 		*/
 		/**
 		@defgroup max_flow Maximum Flow Algorithms
 		@ingroup algs
 		\brief Algorithms for finding maximum flows.
 		This group contains the algorithms for finding maximum flows and
 		feasible circulations.
+		feasible circulations \ref clrs01algorithms, \ref amo93networkflows.
 		The \e maximum \e flow \e problem is to find a flow of maximum value between
 		a single source and a single target. Formally, there is a \f$G=(V,A)\f$
 		digraph, a \f$cap: A\rightarrow\mathbf{R}^+_0\f$ capacity function and
 		\f$s, t \in V\f$ source and target nodes.
 		A maximum flow is an \f$f: A\rightarrow\mathbf{R}^+_0\f$ solution of the
 		following optimization problem.
 		\f[ \max\sum_{sv\in A} f(sv) - \sum_{vs\in A} f(vs) \f]
 		\f[ \sum_{uv\in A} f(uv) = \sum_{vu\in A} f(vu)
 		    \quad \forall u\in V\setminus\{s,t\} \f]
 		\f[ 0 \leq f(uv) \leq cap(uv) \quad \forall uv\in A \f]
 		LEMON contains several algorithms for solving maximum flow problems:
 		- \ref EdmondsKarp Edmonds-Karp algorithm.
 		- \ref Preflow Goldberg-Tarjan's preflow push-relabel algorithm.
 		- \ref DinitzSleatorTarjan Dinitz's blocking flow algorithm with dynamic trees.
 		- \ref GoldbergTarjan Preflow push-relabel algorithm with dynamic trees.
 		- \ref EdmondsKarp Edmonds-Karp algorithm
 		  \ref edmondskarp72theoretical.
 		- \ref Preflow Goldberg-Tarjan's preflow push-relabel algorithm
 		  \ref goldberg88newapproach.
 		- \ref DinitzSleatorTarjan Dinitz's blocking flow algorithm with dynamic trees
 		  \ref dinic70algorithm, \ref sleator83dynamic.
 		- \ref GoldbergTarjan !Preflow push-relabel algorithm with dynamic trees
 		  \ref goldberg88newapproach, \ref sleator83dynamic.
-		In most cases the \ref Preflow "Preflow" algorithm provides the
 		In most cases the \ref Preflow algorithm provides the
 		fastest method for computing a maximum flow. All implementations
 		also provide functions to query the minimum cut, which is the dual
 		problem of maximum flow.
 		\ref Circulation is a preflow push-relabel algorithm implemented directly
 		for finding feasible circulations, which is a somewhat different problem,
 		but it is strongly related to maximum flow.
 		For more information, see \ref Circulation.
 		*/
 		/**
 		@defgroup min_cost_flow_algs Minimum Cost Flow Algorithms
 		@ingroup algs
 		\brief Algorithms for finding minimum cost flows and circulations.
 		This group contains the algorithms for finding minimum cost flows and
 		circulations. For more information about this problem and its dual
 		solution see \ref min_cost_flow "Minimum Cost Flow Problem".
 		circulations \ref amo93networkflows. For more information about this
 		problem and its dual solution, see \ref min_cost_flow
 		"Minimum Cost Flow Problem".
 		LEMON contains several algorithms for this problem.
 		 - \ref NetworkSimplex Primal Network Simplex algorithm with various
 		   pivot strategies.
+		   pivot strategies \ref dantzig63linearprog, \ref kellyoneill91netsimplex.
 		 - \ref CostScaling Push-Relabel and Augment-Relabel algorithms based on
-		   cost scaling.
+		   cost scaling \ref goldberg90approximation, \ref goldberg97efficient,
 		   \ref bunnagel98efficient.
 		 - \ref CapacityScaling Successive Shortest %Path algorithm with optional
 		   capacity scaling.
 		 - \ref CancelAndTighten The Cancel and Tighten algorithm.
-		 - \ref CycleCanceling Cycle-Canceling algorithms.
+		   capacity scaling \ref edmondskarp72theoretical.
 		 - \ref CancelAndTighten The Cancel and Tighten algorithm
 		   \ref goldberg89cyclecanceling.
 		 - \ref CycleCanceling Cycle-Canceling algorithms
 		   \ref klein67primal, \ref goldberg89cyclecanceling.
 		In general NetworkSimplex is the most efficient implementation,
 		but in special cases other algorithms could be faster.
 		For example, if the total supply and/or capacities are rather small,
 		CapacityScaling is usually the fastest algorithm (without effective scaling).
 		*/
 		/**
 		@defgroup min_cut Minimum Cut Algorithms
 		@ingroup algs
 		\brief Algorithms for finding minimum cut in graphs.
 		This group contains the algorithms for finding minimum cut in graphs.
 		The \e minimum \e cut \e problem is to find a non-empty and non-complete
 		\f$X\f$ subset of the nodes with minimum overall capacity on
 		outgoing arcs. Formally, there is a \f$G=(V,A)\f$ digraph, a
 		\f$cap: A\rightarrow\mathbf{R}^+_0\f$ capacity function. The minimum
 		cut is the \f$X\f$ solution of the next optimization problem:
 		\f[ \min_{X \subset V, X\not\in \{\emptyset, V\}}
 		    \sum_{uv\in A: u\in X, v\not\in X}cap(uv) \f]
 		LEMON contains several algorithms related to minimum cut problems:
 		- \ref HaoOrlin "Hao-Orlin algorithm" for calculating minimum cut
 		  in directed graphs.
 		- \ref NagamochiIbaraki "Nagamochi-Ibaraki algorithm" for
 		  calculating minimum cut in undirected graphs.
 		- \ref GomoryHu "Gomory-Hu tree computation" for calculating
 		  all-pairs minimum cut in undirected graphs.
 		If you want to find minimum cut just between two distinict nodes,
 		see the \ref max_flow "maximum flow problem".
 		*/
 		/**
 		@defgroup min_mean_cycle Minimum Mean Cycle Algorithms
 		@ingroup algs
 		\brief Algorithms for finding minimum mean cycles.
 		This group contains the algorithms for finding minimum mean cycles
 		\ref clrs01algorithms, \ref amo93networkflows.
 		The \e minimum \e mean \e cycle \e problem is to find a directed cycle
 		of minimum mean length (cost) in a digraph.
 		The mean length of a cycle is the average length of its arcs, i.e. the
 		ratio between the total length of the cycle and the number of arcs on it.
 		This problem has an important connection to \e conservative \e length
 		\e functions, too. A length function on the arcs of a digraph is called
 		conservative if and only if there is no directed cycle of negative total
 		length. For an arbitrary length function, the negative of the minimum
 		cycle mean is the smallest \f$\epsilon\f$ value so that increasing the
 		arc lengths uniformly by \f$\epsilon\f$ results in a conservative length
 		function.
 		LEMON contains three algorithms for solving the minimum mean cycle problem:
 		- \ref Karp "Karp"'s original algorithm \ref amo93networkflows,
 		  \ref dasdan98minmeancycle.
 		- \ref HartmannOrlin "Hartmann-Orlin"'s algorithm, which is an improved
 		  version of Karp's algorithm \ref dasdan98minmeancycle.
 		- \ref Howard "Howard"'s policy iteration algorithm
 		  \ref dasdan98minmeancycle.
 		In practice, the Howard algorithm proved to be by far the most efficient
 		one, though the best known theoretical bound on its running time is
 		exponential.
 		Both Karp and HartmannOrlin algorithms run in time O(ne) and use space
 		O(n<sup>2</sup>+e), but the latter one is typically faster due to the
 		applied early termination scheme.
 		*/
 		/**
 		@defgroup matching Matching Algorithms
 		@ingroup algs
 		\brief Algorithms for finding matchings in graphs and bipartite graphs.
 		This group contains the algorithms for calculating
 		matchings in graphs and bipartite graphs. The general matching problem is
 		finding a subset of the edges for which each node has at most one incident
 		edge.
 		There are several different algorithms for calculate matchings in
 		graphs.  The matching problems in bipartite graphs are generally
 		easier than in general graphs. The goal of the matching optimization
 		can be finding maximum cardinality, maximum weight or minimum cost
 		matching. The search can be constrained to find perfect or
 		maximum cardinality matching.
 		The matching algorithms implemented in LEMON:
 		- \ref MaxBipartiteMatching Hopcroft-Karp augmenting path algorithm
 		  for calculating maximum cardinality matching in bipartite graphs.
 		- \ref PrBipartiteMatching Push-relabel algorithm
 		  for calculating maximum cardinality matching in bipartite graphs.
 		- \ref MaxWeightedBipartiteMatching
 		  Successive shortest path algorithm for calculating maximum weighted
 		  matching and maximum weighted bipartite matching in bipartite graphs.
 		- \ref MinCostMaxBipartiteMatching
 		  Successive shortest path algorithm for calculating minimum cost maximum
 		  matching in bipartite graphs.
 		- \ref MaxMatching Edmond's blossom shrinking algorithm for calculating
 		  maximum cardinality matching in general graphs.
 		- \ref MaxWeightedMatching Edmond's blossom shrinking algorithm for calculating
 		  maximum weighted matching in general graphs.
 		- \ref MaxWeightedPerfectMatching
 		  Edmond's blossom shrinking algorithm for calculating maximum weighted
 		  perfect matching in general graphs.
 		\image html bipartite_matching.png
 		\image latex bipartite_matching.eps "Bipartite Matching" width=\textwidth
 		*/
 		/**
 		@defgroup graph_properties Connectivity and Other Graph Properties
 		@ingroup algs
 		\brief Algorithms for discovering the graph properties
 		This group contains the algorithms for discovering the graph properties
 		like connectivity, bipartiteness, euler property, simplicity etc.
 		\image html connected_components.png
 		\image latex connected_components.eps "Connected components" width=\textwidth
 		*/
 		/**
 		@defgroup planar Planarity Embedding and Drawing
 		@ingroup algs
 		\brief Algorithms for planarity checking, embedding and drawing
 		This group contains the algorithms for planarity checking,
 		embedding and drawing.
 		\image html planar.png
 		\image latex planar.eps "Plane graph" width=\textwidth
 		*/
 		/**
 		@defgroup approx Approximation Algorithms
 		@ingroup algs
 		\brief Approximation algorithms.
 		This group contains the approximation and heuristic algorithms
 		implemented in LEMON.
 		*/
 		/**
 		@defgroup auxalg Auxiliary Algorithms
 		@ingroup algs
 		\brief Auxiliary algorithms implemented in LEMON.
 		This group contains some algorithms implemented in LEMON
 		in order to make it easier to implement complex algorithms.
 		*/
 		/**
 		@defgroup gen_opt_group General Optimization Tools
 		\brief This group contains some general optimization frameworks
 		implemented in LEMON.
 		This group contains some general optimization frameworks
 		implemented in LEMON.
 		*/
 		/**
-		@defgroup lp_group Lp and Mip Solvers
+		@defgroup lp_group LP and MIP Solvers
 		@ingroup gen_opt_group
-		\brief Lp and Mip solver interfaces for LEMON.
+		\brief LP and MIP solver interfaces for LEMON.
 		This group contains Lp and Mip solver interfaces for LEMON. The
 		various LP solvers could be used in the same manner with this
-		interface.
+		This group contains LP and MIP solver interfaces for LEMON.
 		Various LP solvers could be used in the same manner with this
 		high-level interface.
 		The currently supported solvers are \ref glpk, \ref clp, \ref cbc,
 		\ref cplex, \ref soplex.
 		*/
 		/**
 		@defgroup lp_utils Tools for Lp and Mip Solvers
 		@ingroup lp_group
 		\brief Helper tools to the Lp and Mip solvers.
 		This group adds some helper tools to general optimization framework
 		implemented in LEMON.
 		*/
 		/**
 		@defgroup metah Metaheuristics
 		@ingroup gen_opt_group
 		\brief Metaheuristics for LEMON library.
 		This group contains some metaheuristic optimization tools.
 		*/
 		/**
 		@defgroup utils Tools and Utilities
 		\brief Tools and utilities for programming in LEMON
 		Tools and utilities for programming in LEMON.
 		*/
 		/**
 		@defgroup gutils Basic Graph Utilities
 		@ingroup utils
 		\brief Simple basic graph utilities.
 		This group contains some simple basic graph utilities.
 		*/
 		/**
 		@defgroup misc Miscellaneous Tools
 		@ingroup utils
 		\brief Tools for development, debugging and testing.
 		This group contains several useful tools for development,
 		debugging and testing.
 		*/
 		/**
 		@defgroup timecount Time Measuring and Counting
 		@ingroup misc
 		\brief Simple tools for measuring the performance of algorithms.
 		This group contains simple tools for measuring the performance
 		of algorithms.
 		*/
 		/**
 		@defgroup exceptions Exceptions
 		@ingroup utils
 		\brief Exceptions defined in LEMON.
 		This group contains the exceptions defined in LEMON.
 		*/
 		/**
 		@defgroup io_group Input-Output
 		\brief Graph Input-Output methods
 		This group contains the tools for importing and exporting graphs
 		and graph related data. Now it supports the \ref lgf-format
 		"LEMON Graph Format", the \c DIMACS format and the encapsulated
 		postscript (EPS) format.
 		*/
 		/**
 		@defgroup lemon_io LEMON Graph Format
 		@ingroup io_group
 		\brief Reading and writing LEMON Graph Format.
 		This group contains methods for reading and writing
 		\ref lgf-format "LEMON Graph Format".
 		*/
 		/**
 		@defgroup eps_io Postscript Exporting
 		@ingroup io_group
 		\brief General \c EPS drawer and graph exporter
 		This group contains general \c EPS drawing methods and special
 		graph exporting tools.
 		*/
 		/**
 		@defgroup dimacs_group DIMACS Format
 		@ingroup io_group
 		\brief Read and write files in DIMACS format
 		Tools to read a digraph from or write it to a file in DIMACS format data.
 		*/
 		/**
 		@defgroup nauty_group NAUTY Format
 		@ingroup io_group
 		\brief Read \e Nauty format
 		Tool to read graphs from \e Nauty format data.
 		*/
 		/**
 		@defgroup concept Concepts
 		\brief Skeleton classes and concept checking classes
 		This group contains the data/algorithm skeletons and concept checking
 		classes implemented in LEMON.
 		The purpose of the classes in this group is fourfold.
 		- These classes contain the documentations of the %concepts. In order
 		  to avoid document multiplications, an implementation of a concept
 		  simply refers to the corresponding concept class.
 		- These classes declare every functions, <tt>typedef</tt>s etc. an
 		  implementation of the %concepts should provide, however completely
 		  without implementations and real data structures behind the
 		  interface. On the other hand they should provide nothing else. All
 		  the algorithms working on a data structure meeting a certain concept
 		  should compile with these classes. (Though it will not run properly,
 		  of course.) In this way it is easily to check if an algorithm
 		  doesn't use any extra feature of a certain implementation.
 		- The concept descriptor classes also provide a <em>checker class</em>
 		  that makes it possible to check whether a certain implementation of a
 		  concept indeed provides all the required features.
 		- Finally, They can serve as a skeleton of a new implementation of a concept.
 		*/
 		/**
 		@defgroup graph_concepts Graph Structure Concepts
 		@ingroup concept
 		\brief Skeleton and concept checking classes for graph structures
 		This group contains the skeletons and concept checking classes of LEMON's
 		graph structures and helper classes used to implement these.
 		This group contains the skeletons and concept checking classes of
 		graph structures.
 		*/
 		/**
 		@defgroup map_concepts Map Concepts
 		@ingroup concept
 		\brief Skeleton and concept checking classes for maps
 		This group contains the skeletons and concept checking classes of maps.
 		*/
 		/**
 		@defgroup tools Standalone Utility Applications
 		Some utility applications are listed here.
 		The standard compilation procedure (<tt>./configure;make</tt>) will compile
 		them, as well.
 		*/
 		/**
 		\anchor demoprograms
 		@defgroup demos Demo Programs
 		Some demo programs are listed here. Their full source codes can be found in
 		the \c demo subdirectory of the source tree.
 		In order to compile them, use the <tt>make demo</tt> or the
 		<tt>make check</tt> commands.
 		*/
+		}

doc/mainpage.dox

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 		/* -*- mode: C++; indent-tabs-mode: nil; -*-
+		 *
 		 * This file is a part of LEMON, a generic C++ optimization library.
+		 *
 		 * Copyright (C) 2003-2009
 		 * Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
 		 * (Egervary Research Group on Combinatorial Optimization, EGRES).
+		 *
 		 * Permission to use, modify and distribute this software is granted
 		 * provided that this copyright notice appears in all copies. For
 		 * precise terms see the accompanying LICENSE file.
+		 *
 		 * This software is provided "AS IS" with no warranty of any kind,
 		 * express or implied, and with no claim as to its suitability for any
 		 * purpose.
+		 *
 		 */
 		/**
 		\mainpage LEMON Documentation
 		\section intro Introduction
 		\subsection whatis What is LEMON
 		LEMON stands for <b>L</b>ibrary for <b>E</b>fficient <b>M</b>odeling
 		and <b>O</b>ptimization in <b>N</b>etworks.
 		It is a C++ template
 		library aimed at combinatorial optimization tasks which
 		often involve in working
 		with graphs.
 		<b>LEMON</b> stands for <i><b>L</b>ibrary for <b>E</b>fficient <b>M</b>odeling
 		and <b>O</b>ptimization in <b>N</b>etworks</i>.
 		It is a C++ template library providing efficient implementation of common
 		data structures and algorithms with focus on combinatorial optimization
 		problems in graphs and networks.
 		<b>
 		LEMON is an <a class="el" href="http://opensource.org/">open&nbsp;source</a>
 		project.
 		You are free to use it in your commercial or
 		non-commercial applications under very permissive
 		\ref license "license terms".
 		</b>
-		\subsection howtoread How to read the documentation
+		The project is maintained by the
 		<a href="http://www.cs.elte.hu/egres/">Egerv&aacute;ry Research Group on
 		Combinatorial Optimization</a> \ref egres
 		at the Operations Research Department of the
 		<a href="http://www.elte.hu/">E&ouml;tv&ouml;s Lor&aacute;nd University,
 		Budapest</a>, Hungary.
 		LEMON is also a member of the <a href="http://www.coin-or.org/">COIN-OR</a>
 		initiative \ref coinor.
 		\section howtoread How to Read the Documentation
 		If you would like to get to know the library, see
 		<a class="el" href="http://lemon.cs.elte.hu/pub/tutorial/">LEMON Tutorial</a>.
 		If you know what you are looking for, then try to find it under the
 		<a class="el" href="modules.html">Modules</a> section.
 		If you are a user of the old (0.x) series of LEMON, please check out the
 		\ref migration "Migration Guide" for the backward incompatibilities.
 		*/

doc/min_cost_flow.dox

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 		/* -*- mode: C++; indent-tabs-mode: nil; -*-
+		 *
 		 * This file is a part of LEMON, a generic C++ optimization library.
+		 *
 		 * Copyright (C) 2003-2009
 		 * Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
 		 * (Egervary Research Group on Combinatorial Optimization, EGRES).
+		 *
 		 * Permission to use, modify and distribute this software is granted
 		 * provided that this copyright notice appears in all copies. For
 		 * precise terms see the accompanying LICENSE file.
+		 *
 		 * This software is provided "AS IS" with no warranty of any kind,
 		 * express or implied, and with no claim as to its suitability for any
 		 * purpose.
+		 *
 		 */
 		namespace lemon {
 		/**
 		\page min_cost_flow Minimum Cost Flow Problem
 		\section mcf_def Definition (GEQ form)
 		The \e minimum \e cost \e flow \e problem is to find a feasible flow of
 		minimum total cost from a set of supply nodes to a set of demand nodes
 		in a network with capacity constraints (lower and upper bounds)
 		and arc costs.
+		and arc costs \ref amo93networkflows.
 		Formally, let \f$G=(V,A)\f$ be a digraph, \f$lower: A\rightarrow\mathbf{R}\f$,
 		\f$upper: A\rightarrow\mathbf{R}\cup\{+\infty\}\f$ denote the lower and
 		upper bounds for the flow values on the arcs, for which
 		\f$lower(uv) \leq upper(uv)\f$ must hold for all \f$uv\in A\f$,
 		\f$cost: A\rightarrow\mathbf{R}\f$ denotes the cost per unit flow
 		on the arcs and \f$sup: V\rightarrow\mathbf{R}\f$ denotes the
 		signed supply values of the nodes.
 		If \f$sup(u)>0\f$, then \f$u\f$ is a supply node with \f$sup(u)\f$
 		supply, if \f$sup(u)<0\f$, then \f$u\f$ is a demand node with
 		\f$-sup(u)\f$ demand.
 		A minimum cost flow is an \f$f: A\rightarrow\mathbf{R}\f$ solution
 		of the following optimization problem.
 		\f[ \min\sum_{uv\in A} f(uv) \cdot cost(uv) \f]
 		\f[ \sum_{uv\in A} f(uv) - \sum_{vu\in A} f(vu) \geq
 		    sup(u) \quad \forall u\in V \f]
 		\f[ lower(uv) \leq f(uv) \leq upper(uv) \quad \forall uv\in A \f]
 		The sum of the supply values, i.e. \f$\sum_{u\in V} sup(u)\f$ must be
 		zero or negative in order to have a feasible solution (since the sum
 		of the expressions on the left-hand side of the inequalities is zero).
 		It means that the total demand must be greater or equal to the total
 		supply and all the supplies have to be carried out from the supply nodes,
 		but there could be demands that are not satisfied.
 		If \f$\sum_{u\in V} sup(u)\f$ is zero, then all the supply/demand
 		constraints have to be satisfied with equality, i.e. all demands
 		have to be satisfied and all supplies have to be used.
 		\section mcf_algs Algorithms
 		LEMON contains several algorithms for solving this problem, for more
 		information see \ref min_cost_flow_algs "Minimum Cost Flow Algorithms".
 		A feasible solution for this problem can be found using \ref Circulation.
 		\section mcf_dual Dual Solution
 		The dual solution of the minimum cost flow problem is represented by
 		node potentials \f$\pi: V\rightarrow\mathbf{R}\f$.
 		An \f$f: A\rightarrow\mathbf{R}\f$ primal feasible solution is optimal
 		if and only if for some \f$\pi: V\rightarrow\mathbf{R}\f$ node potentials
 		the following \e complementary \e slackness optimality conditions hold.
 		 - For all \f$uv\in A\f$ arcs:
 		   - if \f$cost^\pi(uv)>0\f$, then \f$f(uv)=lower(uv)\f$;
 		   - if \f$lower(uv)<f(uv)<upper(uv)\f$, then \f$cost^\pi(uv)=0\f$;
 		   - if \f$cost^\pi(uv)<0\f$, then \f$f(uv)=upper(uv)\f$.
 		 - For all \f$u\in V\f$ nodes:
 		   - \f$\pi(u)<=0\f$;
 		   - if \f$\sum_{uv\in A} f(uv) - \sum_{vu\in A} f(vu) \neq sup(u)\f$,
 		     then \f$\pi(u)=0\f$.
 		Here \f$cost^\pi(uv)\f$ denotes the \e reduced \e cost of the arc
 		\f$uv\in A\f$ with respect to the potential function \f$\pi\f$, i.e.
 		\f[ cost^\pi(uv) = cost(uv) + \pi(u) - \pi(v).\f]
 		All algorithms provide dual solution (node potentials), as well,
 		if an optimal flow is found.
 		\section mcf_eq Equality Form
 		The above \ref mcf_def "definition" is actually more general than the
 		usual formulation of the minimum cost flow problem, in which strict
 		equalities are required in the supply/demand contraints.
 		\f[ \min\sum_{uv\in A} f(uv) \cdot cost(uv) \f]
 		\f[ \sum_{uv\in A} f(uv) - \sum_{vu\in A} f(vu) =
 		    sup(u) \quad \forall u\in V \f]
 		\f[ lower(uv) \leq f(uv) \leq upper(uv) \quad \forall uv\in A \f]
 		However if the sum of the supply values is zero, then these two problems
 		are equivalent.
 		The \ref min_cost_flow_algs "algorithms" in LEMON support the general
 		form, so if you need the equality form, you have to ensure this additional
 		contraint manually.
 		\section mcf_leq Opposite Inequalites (LEQ Form)
 		Another possible definition of the minimum cost flow problem is
 		when there are <em>"less or equal"</em> (LEQ) supply/demand constraints,
 		instead of the <em>"greater or equal"</em> (GEQ) constraints.
 		\f[ \min\sum_{uv\in A} f(uv) \cdot cost(uv) \f]
 		\f[ \sum_{uv\in A} f(uv) - \sum_{vu\in A} f(vu) \leq
 		    sup(u) \quad \forall u\in V \f]
 		\f[ lower(uv) \leq f(uv) \leq upper(uv) \quad \forall uv\in A \f]
 		It means that the total demand must be less or equal to the
 		total supply (i.e. \f$\sum_{u\in V} sup(u)\f$ must be zero or
 		positive) and all the demands have to be satisfied, but there
 		could be supplies that are not carried out from the supply
 		nodes.
 		The equality form is also a special case of this form, of course.
 		You could easily transform this case to the \ref mcf_def "GEQ form"
 		of the problem by reversing the direction of the arcs and taking the
 		negative of the supply values (e.g. using \ref ReverseDigraph and
 		\ref NegMap adaptors).
 		However \ref NetworkSimplex algorithm also supports this form directly
 		for the sake of convenience.
 		Note that the optimality conditions for this supply constraint type are
 		slightly differ from the conditions that are discussed for the GEQ form,
 		namely the potentials have to be non-negative instead of non-positive.
 		An \f$f: A\rightarrow\mathbf{R}\f$ feasible solution of this problem
 		is optimal if and only if for some \f$\pi: V\rightarrow\mathbf{R}\f$
 		node potentials the following conditions hold.
 		 - For all \f$uv\in A\f$ arcs:
 		   - if \f$cost^\pi(uv)>0\f$, then \f$f(uv)=lower(uv)\f$;
 		   - if \f$lower(uv)<f(uv)<upper(uv)\f$, then \f$cost^\pi(uv)=0\f$;
 		   - if \f$cost^\pi(uv)<0\f$, then \f$f(uv)=upper(uv)\f$.
 		 - For all \f$u\in V\f$ nodes:
 		   - \f$\pi(u)>=0\f$;
 		   - if \f$\sum_{uv\in A} f(uv) - \sum_{vu\in A} f(vu) \neq sup(u)\f$,
 		     then \f$\pi(u)=0\f$.
 		*/
+		}

lemon/Makefile.am

Show inline comments

 		EXTRA_DIST += \
 			lemon/lemon.pc.in \
 			lemon/CMakeLists.txt \
 			lemon/config.h.cmake
 		pkgconfig_DATA += lemon/lemon.pc
 		lib_LTLIBRARIES += lemon/libemon.la
 		lemon_libemon_la_SOURCES = \
 			lemon/arg_parser.cc \
 			lemon/base.cc \
 			lemon/color.cc \
 			lemon/lp_base.cc \
 			lemon/lp_skeleton.cc \
 			lemon/random.cc \
 			lemon/bits/windows.cc
 		nodist_lemon_HEADERS = lemon/config.h
 		lemon_libemon_la_CXXFLAGS = \
 			$(AM_CXXFLAGS) \
 			$(GLPK_CFLAGS) \
 			$(CPLEX_CFLAGS) \
 			$(SOPLEX_CXXFLAGS) \
 			$(CLP_CXXFLAGS) \
 			$(CBC_CXXFLAGS)
 		lemon_libemon_la_LDFLAGS = \
 			$(GLPK_LIBS) \
 			$(CPLEX_LIBS) \
 			$(SOPLEX_LIBS) \
 			$(CLP_LIBS) \
 			$(CBC_LIBS)
 		if HAVE_GLPK
 		lemon_libemon_la_SOURCES += lemon/glpk.cc
 		endif
 		if HAVE_CPLEX
 		lemon_libemon_la_SOURCES += lemon/cplex.cc
 		endif
 		if HAVE_SOPLEX
 		lemon_libemon_la_SOURCES += lemon/soplex.cc
 		endif
 		if HAVE_CLP
 		lemon_libemon_la_SOURCES += lemon/clp.cc
 		endif
 		if HAVE_CBC
 		lemon_libemon_la_SOURCES += lemon/cbc.cc
 		endif
 		lemon_HEADERS += \
 			lemon/adaptors.h \
 			lemon/arg_parser.h \
 			lemon/assert.h \
 			lemon/bellman_ford.h \
 			lemon/bfs.h \
 			lemon/bin_heap.h \
 			lemon/binom_heap.h \
 			lemon/bucket_heap.h \
 			lemon/cbc.h \
 			lemon/circulation.h \
 			lemon/clp.h \
 			lemon/color.h \
 			lemon/concept_check.h \
 			lemon/connectivity.h \
 			lemon/counter.h \
 			lemon/core.h \
 			lemon/cplex.h \
 			lemon/dfs.h \
 			lemon/dijkstra.h \
 			lemon/dim2.h \
 			lemon/dimacs.h \
 			lemon/edge_set.h \
 			lemon/elevator.h \
 			lemon/error.h \
 			lemon/euler.h \
 			lemon/fib_heap.h \
 			lemon/fourary_heap.h \
 			lemon/full_graph.h \
 			lemon/glpk.h \
 			lemon/gomory_hu.h \
 			lemon/graph_to_eps.h \
 			lemon/grid_graph.h \
 			lemon/hartmann_orlin.h \
 			lemon/howard.h \
 			lemon/hypercube_graph.h \
 			lemon/karp.h \
 			lemon/kary_heap.h \
 			lemon/kruskal.h \
 			lemon/hao_orlin.h \
 			lemon/lgf_reader.h \
 			lemon/lgf_writer.h \
 			lemon/list_graph.h \
 			lemon/lp.h \
 			lemon/lp_base.h \
 			lemon/lp_skeleton.h \
 			lemon/maps.h \
 			lemon/matching.h \
 			lemon/math.h \
 			lemon/min_cost_arborescence.h \
 			lemon/nauty_reader.h \
 			lemon/network_simplex.h \
 			lemon/pairing_heap.h \
 			lemon/path.h \
 			lemon/preflow.h \
 			lemon/radix_heap.h \
 			lemon/radix_sort.h \
 			lemon/random.h \
 			lemon/smart_graph.h \
 			lemon/soplex.h \
 			lemon/static_graph.h \
 			lemon/suurballe.h \
 			lemon/time_measure.h \
 			lemon/tolerance.h \
 			lemon/unionfind.h \
 			lemon/bits/windows.h
 		bits_HEADERS += \
 			lemon/bits/alteration_notifier.h \
 			lemon/bits/array_map.h \
 			lemon/bits/bezier.h \
 			lemon/bits/default_map.h \
 			lemon/bits/edge_set_extender.h \
 			lemon/bits/enable_if.h \
 			lemon/bits/graph_adaptor_extender.h \
 			lemon/bits/graph_extender.h \
 			lemon/bits/map_extender.h \
 			lemon/bits/path_dump.h \
 			lemon/bits/solver_bits.h \
 			lemon/bits/traits.h \
 			lemon/bits/variant.h \
 			lemon/bits/vector_map.h
 		concept_HEADERS += \
 			lemon/concepts/digraph.h \
 			lemon/concepts/graph.h \
 			lemon/concepts/graph_components.h \
 			lemon/concepts/heap.h \
 			lemon/concepts/maps.h \
 			lemon/concepts/path.h

lemon/bits/graph_extender.h

Show inline comments

 		/* -*- mode: C++; indent-tabs-mode: nil; -*-
+		 *
 		 * This file is a part of LEMON, a generic C++ optimization library.
+		 *
 		 * Copyright (C) 2003-2009
 		 * Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
 		 * (Egervary Research Group on Combinatorial Optimization, EGRES).
+		 *
 		 * Permission to use, modify and distribute this software is granted
 		 * provided that this copyright notice appears in all copies. For
 		 * precise terms see the accompanying LICENSE file.
+		 *
 		 * This software is provided "AS IS" with no warranty of any kind,
 		 * express or implied, and with no claim as to its suitability for any
 		 * purpose.
+		 *
 		 */
 		#ifndef LEMON_BITS_GRAPH_EXTENDER_H
 		#define LEMON_BITS_GRAPH_EXTENDER_H
 		#include <lemon/core.h>
 		#include <lemon/bits/map_extender.h>
 		#include <lemon/bits/default_map.h>
 		#include <lemon/concept_check.h>
 		#include <lemon/concepts/maps.h>
 		//\ingroup graphbits
 		//\file
 		//\brief Extenders for the graph types
 		namespace lemon {
 		  // \ingroup graphbits
 		  //
 		  // \brief Extender for the digraph implementations
 		  template <typename Base>
 		  class DigraphExtender : public Base {
 		    typedef Base Parent;
 		  public:
 		    typedef DigraphExtender Digraph;
 		    // Base extensions
 		    typedef typename Parent::Node Node;
 		    typedef typename Parent::Arc Arc;
 		    int maxId(Node) const {
 		      return Parent::maxNodeId();
+		    }
 		    int maxId(Arc) const {
 		      return Parent::maxArcId();
+		    }
-		    Node fromId(int id, Node) const {
+		    static Node fromId(int id, Node) {
 		      return Parent::nodeFromId(id);
+		    }
-		    Arc fromId(int id, Arc) const {
+		    static Arc fromId(int id, Arc) {
 		      return Parent::arcFromId(id);
+		    }
 		    Node oppositeNode(const Node &node, const Arc &arc) const {
 		      if (node == Parent::source(arc))
 		        return Parent::target(arc);
 		      else if(node == Parent::target(arc))
 		        return Parent::source(arc);
 		      else
 		        return INVALID;
+		    }
 		    // Alterable extension
 		    typedef AlterationNotifier<DigraphExtender, Node> NodeNotifier;
 		    typedef AlterationNotifier<DigraphExtender, Arc> ArcNotifier;
 		  protected:
 		    mutable NodeNotifier node_notifier;
 		    mutable ArcNotifier arc_notifier;
 		  public:
 		    NodeNotifier& notifier(Node) const {
 		      return node_notifier;
+		    }
 		    ArcNotifier& notifier(Arc) const {
 		      return arc_notifier;
+		    }
 		    class NodeIt : public Node {
 		      const Digraph* _digraph;
 		    public:
 		      NodeIt() {}
 		      NodeIt(Invalid i) : Node(i) { }
 		      explicit NodeIt(const Digraph& digraph) : _digraph(&digraph) {
 		        _digraph->first(static_cast<Node&>(*this));
+		      }
 		      NodeIt(const Digraph& digraph, const Node& node)
 		        : Node(node), _digraph(&digraph) {}
 		      NodeIt& operator++() {
 		        _digraph->next(*this);
 		        return *this;
+		      }
 		    };
 		    class ArcIt : public Arc {
 		      const Digraph* _digraph;
 		    public:
 		      ArcIt() { }
 		      ArcIt(Invalid i) : Arc(i) { }
 		      explicit ArcIt(const Digraph& digraph) : _digraph(&digraph) {
 		        _digraph->first(static_cast<Arc&>(*this));
+		      }
 		      ArcIt(const Digraph& digraph, const Arc& arc) :
 		        Arc(arc), _digraph(&digraph) { }
 		      ArcIt& operator++() {
 		        _digraph->next(*this);
 		        return *this;
+		      }
 		    };
 		    class OutArcIt : public Arc {
 		      const Digraph* _digraph;
 		    public:
 		      OutArcIt() { }
 		      OutArcIt(Invalid i) : Arc(i) { }
 		      OutArcIt(const Digraph& digraph, const Node& node)
 		        : _digraph(&digraph) {
 		        _digraph->firstOut(*this, node);
+		      }
 		      OutArcIt(const Digraph& digraph, const Arc& arc)
 		        : Arc(arc), _digraph(&digraph) {}
 		      OutArcIt& operator++() {
 		        _digraph->nextOut(*this);
 		        return *this;
+		      }
 		    };
 		    class InArcIt : public Arc {
 		      const Digraph* _digraph;
 		    public:
 		      InArcIt() { }
 		      InArcIt(Invalid i) : Arc(i) { }
 		      InArcIt(const Digraph& digraph, const Node& node)
 		        : _digraph(&digraph) {
 		        _digraph->firstIn(*this, node);
+		      }
 		      InArcIt(const Digraph& digraph, const Arc& arc) :
 		        Arc(arc), _digraph(&digraph) {}
 		      InArcIt& operator++() {
 		        _digraph->nextIn(*this);
 		        return *this;
+		      }
 		    };
 		    // \brief Base node of the iterator
 		    //
 		    // Returns the base node (i.e. the source in this case) of the iterator
 		    Node baseNode(const OutArcIt &arc) const {
 		      return Parent::source(arc);
+		    }
 		    // \brief Running node of the iterator
 		    //
 		    // Returns the running node (i.e. the target in this case) of the
 		    // iterator
 		    Node runningNode(const OutArcIt &arc) const {
 		      return Parent::target(arc);
+		    }
 		    // \brief Base node of the iterator
 		    //
 		    // Returns the base node (i.e. the target in this case) of the iterator
 		    Node baseNode(const InArcIt &arc) const {
 		      return Parent::target(arc);
+		    }
 		    // \brief Running node of the iterator
 		    //
 		    // Returns the running node (i.e. the source in this case) of the
 		    // iterator
 		    Node runningNode(const InArcIt &arc) const {
 		      return Parent::source(arc);
+		    }
 		    template <typename _Value>
 		    class NodeMap
 		      : public MapExtender<DefaultMap<Digraph, Node, _Value> > {
 		      typedef MapExtender<DefaultMap<Digraph, Node, _Value> > Parent;
 		    public:
 		      explicit NodeMap(const Digraph& digraph)
 		        : Parent(digraph) {}
 		      NodeMap(const Digraph& digraph, const _Value& value)
 		        : Parent(digraph, value) {}
 		    private:
 		      NodeMap& operator=(const NodeMap& cmap) {
 		        return operator=<NodeMap>(cmap);
+		      }
 		      template <typename CMap>
 		      NodeMap& operator=(const CMap& cmap) {
 		        Parent::operator=(cmap);
 		        return *this;
+		      }
 		    };
 		    template <typename _Value>
 		    class ArcMap
 		      : public MapExtender<DefaultMap<Digraph, Arc, _Value> > {
 		      typedef MapExtender<DefaultMap<Digraph, Arc, _Value> > Parent;
 		    public:
 		      explicit ArcMap(const Digraph& digraph)
 		        : Parent(digraph) {}
 		      ArcMap(const Digraph& digraph, const _Value& value)
 		        : Parent(digraph, value) {}
 		    private:
 		      ArcMap& operator=(const ArcMap& cmap) {
 		        return operator=<ArcMap>(cmap);
+		      }
 		      template <typename CMap>
 		      ArcMap& operator=(const CMap& cmap) {
 		        Parent::operator=(cmap);
 		        return *this;
+		      }
 		    };
 		    Node addNode() {
 		      Node node = Parent::addNode();
 		      notifier(Node()).add(node);
 		      return node;
+		    }
 		    Arc addArc(const Node& from, const Node& to) {
 		      Arc arc = Parent::addArc(from, to);
 		      notifier(Arc()).add(arc);
 		      return arc;
+		    }
 		    void clear() {
 		      notifier(Arc()).clear();
 		      notifier(Node()).clear();
 		      Parent::clear();
+		    }
 		    template <typename Digraph, typename NodeRefMap, typename ArcRefMap>
 		    void build(const Digraph& digraph, NodeRefMap& nodeRef, ArcRefMap& arcRef) {
 		      Parent::build(digraph, nodeRef, arcRef);
 		      notifier(Node()).build();
 		      notifier(Arc()).build();
+		    }
 		    void erase(const Node& node) {
 		      Arc arc;
 		      Parent::firstOut(arc, node);
 		      while (arc != INVALID ) {
 		        erase(arc);
 		        Parent::firstOut(arc, node);
+		      }
 		      Parent::firstIn(arc, node);
 		      while (arc != INVALID ) {
 		        erase(arc);
 		        Parent::firstIn(arc, node);
+		      }
 		      notifier(Node()).erase(node);
 		      Parent::erase(node);
+		    }
 		    void erase(const Arc& arc) {
 		      notifier(Arc()).erase(arc);
 		      Parent::erase(arc);
+		    }
 		    DigraphExtender() {
 		      node_notifier.setContainer(*this);
 		      arc_notifier.setContainer(*this);
+		    }
 		    ~DigraphExtender() {
 		      arc_notifier.clear();
 		      node_notifier.clear();
+		    }
 		  };
 		  // \ingroup _graphbits
 		  //
 		  // \brief Extender for the Graphs
 		  template <typename Base>
 		  class GraphExtender : public Base {
 		    typedef Base Parent;
 		  public:
 		    typedef GraphExtender Graph;
 		    typedef True UndirectedTag;
 		    typedef typename Parent::Node Node;
 		    typedef typename Parent::Arc Arc;
 		    typedef typename Parent::Edge Edge;
 		    // Graph extension
 		    int maxId(Node) const {
 		      return Parent::maxNodeId();
+		    }
 		    int maxId(Arc) const {
 		      return Parent::maxArcId();
+		    }
 		    int maxId(Edge) const {
 		      return Parent::maxEdgeId();
+		    }
-		    Node fromId(int id, Node) const {
+		    static Node fromId(int id, Node) {
 		      return Parent::nodeFromId(id);
+		    }
-		    Arc fromId(int id, Arc) const {
+		    static Arc fromId(int id, Arc) {
 		      return Parent::arcFromId(id);
+		    }
-		    Edge fromId(int id, Edge) const {
+		    static Edge fromId(int id, Edge) {
 		      return Parent::edgeFromId(id);
+		    }
 		    Node oppositeNode(const Node &n, const Edge &e) const {
 		      if( n == Parent::u(e))
 		        return Parent::v(e);
 		      else if( n == Parent::v(e))
 		        return Parent::u(e);
 		      else
 		        return INVALID;
+		    }
 		    Arc oppositeArc(const Arc &arc) const {
 		      return Parent::direct(arc, !Parent::direction(arc));
+		    }
 		    using Parent::direct;
 		    Arc direct(const Edge &edge, const Node &node) const {
 		      return Parent::direct(edge, Parent::u(edge) == node);
+		    }
 		    // Alterable extension
 		    typedef AlterationNotifier<GraphExtender, Node> NodeNotifier;
 		    typedef AlterationNotifier<GraphExtender, Arc> ArcNotifier;
 		    typedef AlterationNotifier<GraphExtender, Edge> EdgeNotifier;
 		  protected:
 		    mutable NodeNotifier node_notifier;
 		    mutable ArcNotifier arc_notifier;
 		    mutable EdgeNotifier edge_notifier;
 		  public:
 		    NodeNotifier& notifier(Node) const {
 		      return node_notifier;
+		    }
 		    ArcNotifier& notifier(Arc) const {
 		      return arc_notifier;
+		    }
 		    EdgeNotifier& notifier(Edge) const {
 		      return edge_notifier;
+		    }
 		    class NodeIt : public Node {
 		      const Graph* _graph;
 		    public:
 		      NodeIt() {}
 		      NodeIt(Invalid i) : Node(i) { }
 		      explicit NodeIt(const Graph& graph) : _graph(&graph) {
 		        _graph->first(static_cast<Node&>(*this));
+		      }
 		      NodeIt(const Graph& graph, const Node& node)
 		        : Node(node), _graph(&graph) {}
 		      NodeIt& operator++() {
 		        _graph->next(*this);
 		        return *this;
+		      }
 		    };
 		    class ArcIt : public Arc {
 		      const Graph* _graph;
 		    public:
 		      ArcIt() { }
 		      ArcIt(Invalid i) : Arc(i) { }
 		      explicit ArcIt(const Graph& graph) : _graph(&graph) {
 		        _graph->first(static_cast<Arc&>(*this));
+		      }
 		      ArcIt(const Graph& graph, const Arc& arc) :
 		        Arc(arc), _graph(&graph) { }
 		      ArcIt& operator++() {
 		        _graph->next(*this);
 		        return *this;
+		      }
 		    };
 		    class OutArcIt : public Arc {
 		      const Graph* _graph;
 		    public:
 		      OutArcIt() { }
 		      OutArcIt(Invalid i) : Arc(i) { }
 		      OutArcIt(const Graph& graph, const Node& node)
 		        : _graph(&graph) {
 		        _graph->firstOut(*this, node);
+		      }
 		      OutArcIt(const Graph& graph, const Arc& arc)
 		        : Arc(arc), _graph(&graph) {}
 		      OutArcIt& operator++() {
 		        _graph->nextOut(*this);
 		        return *this;
+		      }
 		    };
 		    class InArcIt : public Arc {
 		      const Graph* _graph;
 		    public:
 		      InArcIt() { }
 		      InArcIt(Invalid i) : Arc(i) { }
 		      InArcIt(const Graph& graph, const Node& node)
 		        : _graph(&graph) {
 		        _graph->firstIn(*this, node);
+		      }
 		      InArcIt(const Graph& graph, const Arc& arc) :
 		        Arc(arc), _graph(&graph) {}
 		      InArcIt& operator++() {
 		        _graph->nextIn(*this);
 		        return *this;
+		      }
 		    };
 		    class EdgeIt : public Parent::Edge {
 		      const Graph* _graph;
 		    public:
 		      EdgeIt() { }
 		      EdgeIt(Invalid i) : Edge(i) { }
 		      explicit EdgeIt(const Graph& graph) : _graph(&graph) {
 		        _graph->first(static_cast<Edge&>(*this));
+		      }
 		      EdgeIt(const Graph& graph, const Edge& edge) :
 		        Edge(edge), _graph(&graph) { }
 		      EdgeIt& operator++() {
 		        _graph->next(*this);
 		        return *this;
+		      }
 		    };
 		    class IncEdgeIt : public Parent::Edge {
 		      friend class GraphExtender;
 		      const Graph* _graph;
 		      bool _direction;
 		    public:
 		      IncEdgeIt() { }
 		      IncEdgeIt(Invalid i) : Edge(i), _direction(false) { }
 		      IncEdgeIt(const Graph& graph, const Node &node) : _graph(&graph) {
 		        _graph->firstInc(*this, _direction, node);
+		      }
 		      IncEdgeIt(const Graph& graph, const Edge &edge, const Node &node)
 		        : _graph(&graph), Edge(edge) {
 		        _direction = (_graph->source(edge) == node);
+		      }
 		      IncEdgeIt& operator++() {
 		        _graph->nextInc(*this, _direction);
 		        return *this;
+		      }
 		    };
 		    // \brief Base node of the iterator
 		    //
 		    // Returns the base node (ie. the source in this case) of the iterator
 		    Node baseNode(const OutArcIt &arc) const {
 		      return Parent::source(static_cast<const Arc&>(arc));
+		    }
 		    // \brief Running node of the iterator
 		    //
 		    // Returns the running node (ie. the target in this case) of the
 		    // iterator
 		    Node runningNode(const OutArcIt &arc) const {
 		      return Parent::target(static_cast<const Arc&>(arc));
+		    }
 		    // \brief Base node of the iterator
 		    //
 		    // Returns the base node (ie. the target in this case) of the iterator
 		    Node baseNode(const InArcIt &arc) const {
 		      return Parent::target(static_cast<const Arc&>(arc));
+		    }
 		    // \brief Running node of the iterator
 		    //
 		    // Returns the running node (ie. the source in this case) of the
 		    // iterator
 		    Node runningNode(const InArcIt &arc) const {
 		      return Parent::source(static_cast<const Arc&>(arc));
+		    }
 		    // Base node of the iterator
 		    //
 		    // Returns the base node of the iterator
 		    Node baseNode(const IncEdgeIt &edge) const {
 		      return edge._direction ? u(edge) : v(edge);
+		    }
 		    // Running node of the iterator
 		    //
 		    // Returns the running node of the iterator
 		    Node runningNode(const IncEdgeIt &edge) const {
 		      return edge._direction ? v(edge) : u(edge);
+		    }
 		    // Mappable extension
 		    template <typename _Value>
 		    class NodeMap
 		      : public MapExtender<DefaultMap<Graph, Node, _Value> > {
 		      typedef MapExtender<DefaultMap<Graph, Node, _Value> > Parent;
 		    public:
 		      explicit NodeMap(const Graph& graph)
 		        : Parent(graph) {}
 		      NodeMap(const Graph& graph, const _Value& value)
 		        : Parent(graph, value) {}
 		    private:
 		      NodeMap& operator=(const NodeMap& cmap) {
 		        return operator=<NodeMap>(cmap);
+		      }
 		      template <typename CMap>
 		      NodeMap& operator=(const CMap& cmap) {
 		        Parent::operator=(cmap);
 		        return *this;
+		      }

lemon/cbc.cc

Show inline comments

 		/* -*- mode: C++; indent-tabs-mode: nil; -*-
+		 *
 		 * This file is a part of LEMON, a generic C++ optimization library.
+		 *
 		 * Copyright (C) 2003-2009
 		 * Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
 		 * (Egervary Research Group on Combinatorial Optimization, EGRES).
+		 *
 		 * Permission to use, modify and distribute this software is granted
 		 * provided that this copyright notice appears in all copies. For
 		 * precise terms see the accompanying LICENSE file.
+		 *
 		 * This software is provided "AS IS" with no warranty of any kind,
 		 * express or implied, and with no claim as to its suitability for any
 		 * purpose.
+		 *
 		 */
 		///\file
 		///\brief Implementation of the CBC MIP solver interface.
 		#include "cbc.h"
 		#include <coin/CoinModel.hpp>
 		#include <coin/CbcModel.hpp>
 		#include <coin/OsiSolverInterface.hpp>
 		#ifdef COIN_HAS_CLP
 		#include "coin/OsiClpSolverInterface.hpp"
 		#endif
 		#ifdef COIN_HAS_OSL
 		#include "coin/OsiOslSolverInterface.hpp"
 		#endif
 		#include "coin/CbcCutGenerator.hpp"
 		#include "coin/CbcHeuristicLocal.hpp"
 		#include "coin/CbcHeuristicGreedy.hpp"
 		#include "coin/CbcHeuristicFPump.hpp"
 		#include "coin/CbcHeuristicRINS.hpp"
 		#include "coin/CglGomory.hpp"
 		#include "coin/CglProbing.hpp"
 		#include "coin/CglKnapsackCover.hpp"
 		#include "coin/CglOddHole.hpp"
 		#include "coin/CglClique.hpp"
 		#include "coin/CglFlowCover.hpp"
 		#include "coin/CglMixedIntegerRounding.hpp"
 		#include "coin/CbcHeuristic.hpp"
 		namespace lemon {
 		  CbcMip::CbcMip() {
 		    _prob = new CoinModel();
 		    _prob->setProblemName("LEMON");
 		    _osi_solver = 0;
 		    _cbc_model = 0;
 		    messageLevel(MESSAGE_NOTHING);
+		  }
 		  CbcMip::CbcMip(const CbcMip& other) {
 		    _prob = new CoinModel(*other._prob);
 		    _prob->setProblemName("LEMON");
 		    _osi_solver = 0;
 		    _cbc_model = 0;
 		    messageLevel(MESSAGE_NOTHING);
+		  }
 		  CbcMip::~CbcMip() {
 		    delete _prob;
 		    if (_osi_solver) delete _osi_solver;
 		    if (_cbc_model) delete _cbc_model;
+		  }
 		  const char* CbcMip::_solverName() const { return "CbcMip"; }
 		  int CbcMip::_addCol() {
 		    _prob->addColumn(0, 0, 0, -COIN_DBL_MAX, COIN_DBL_MAX, 0.0, 0, false);
 		    return _prob->numberColumns() - 1;
+		  }
 		  CbcMip* CbcMip::newSolver() const {
 		    CbcMip* newlp = new CbcMip;
 		    return newlp;
+		  }
 		  CbcMip* CbcMip::cloneSolver() const {
 		    CbcMip* copylp = new CbcMip(*this);
 		    return copylp;
+		  }
 		  int CbcMip::_addRow() {
 		    _prob->addRow(0, 0, 0, -COIN_DBL_MAX, COIN_DBL_MAX);
 		    return _prob->numberRows() - 1;
+		  }
 		  int CbcMip::_addRow(Value l, ExprIterator b, ExprIterator e, Value u) {
 		    std::vector<int> indexes;
 		    std::vector<Value> values;
 		    for(ExprIterator it = b; it != e; ++it) {
 		      indexes.push_back(it->first);
 		      values.push_back(it->second);
+		    }
 		    _prob->addRow(values.size(), &indexes.front(), &values.front(), l, u);
 		    return _prob->numberRows() - 1;
+		  }
 		  void CbcMip::_eraseCol(int i) {
 		    _prob->deleteColumn(i);
+		  }
 		  void CbcMip::_eraseRow(int i) {
 		    _prob->deleteRow(i);
+		  }
 		  void CbcMip::_eraseColId(int i) {
 		    cols.eraseIndex(i);
+		  }
 		  void CbcMip::_eraseRowId(int i) {
 		    rows.eraseIndex(i);
+		  }
 		  void CbcMip::_getColName(int c, std::string& name) const {
 		    name = _prob->getColumnName(c);
+		  }
 		  void CbcMip::_setColName(int c, const std::string& name) {
 		    _prob->setColumnName(c, name.c_str());
+		  }
 		  int CbcMip::_colByName(const std::string& name) const {
 		    return _prob->column(name.c_str());
+		  }
 		  void CbcMip::_getRowName(int r, std::string& name) const {
 		    name = _prob->getRowName(r);
+		  }
 		  void CbcMip::_setRowName(int r, const std::string& name) {
 		    _prob->setRowName(r, name.c_str());
+		  }
 		  int CbcMip::_rowByName(const std::string& name) const {
 		    return _prob->row(name.c_str());
+		  }
 		  void CbcMip::_setRowCoeffs(int i, ExprIterator b, ExprIterator e) {
 		    for (ExprIterator it = b; it != e; ++it) {
 		      _prob->setElement(i, it->first, it->second);
+		    }
+		  }
 		  void CbcMip::_getRowCoeffs(int ix, InsertIterator b) const {
 		    int length = _prob->numberRows();
 		    std::vector<int> indices(length);
 		    std::vector<Value> values(length);
 		    length = _prob->getRow(ix, &indices[0], &values[0]);
 		    for (int i = 0; i < length; ++i) {
 		      *b = std::make_pair(indices[i], values[i]);
 		      ++b;
+		    }
+		  }
 		  void CbcMip::_setColCoeffs(int ix, ExprIterator b, ExprIterator e) {
 		    for (ExprIterator it = b; it != e; ++it) {
 		      _prob->setElement(it->first, ix, it->second);
+		    }
+		  }
 		  void CbcMip::_getColCoeffs(int ix, InsertIterator b) const {
 		    int length = _prob->numberColumns();
 		    std::vector<int> indices(length);
 		    std::vector<Value> values(length);
 		    length = _prob->getColumn(ix, &indices[0], &values[0]);
 		    for (int i = 0; i < length; ++i) {
 		      *b = std::make_pair(indices[i], values[i]);
 		      ++b;
+		    }
+		  }
 		  void CbcMip::_setCoeff(int ix, int jx, Value value) {
 		    _prob->setElement(ix, jx, value);
+		  }
 		  CbcMip::Value CbcMip::_getCoeff(int ix, int jx) const {
 		    return _prob->getElement(ix, jx);
+		  }
 		  void CbcMip::_setColLowerBound(int i, Value lo) {
 		    LEMON_ASSERT(lo != INF, "Invalid bound");
 		    _prob->setColumnLower(i, lo == - INF ? - COIN_DBL_MAX : lo);
+		  }
 		  CbcMip::Value CbcMip::_getColLowerBound(int i) const {
 		    double val = _prob->getColumnLower(i);
 		    return val == - COIN_DBL_MAX ? - INF : val;
+		  }
 		  void CbcMip::_setColUpperBound(int i, Value up) {
 		    LEMON_ASSERT(up != -INF, "Invalid bound");
 		    _prob->setColumnUpper(i, up == INF ? COIN_DBL_MAX : up);
+		  }
 		  CbcMip::Value CbcMip::_getColUpperBound(int i) const {
 		    double val = _prob->getColumnUpper(i);
 		    return val == COIN_DBL_MAX ? INF : val;
+		  }
 		  void CbcMip::_setRowLowerBound(int i, Value lo) {
 		    LEMON_ASSERT(lo != INF, "Invalid bound");
 		    _prob->setRowLower(i, lo == - INF ? - COIN_DBL_MAX : lo);
+		  }
 		  CbcMip::Value CbcMip::_getRowLowerBound(int i) const {
 		    double val = _prob->getRowLower(i);
 		    return val == - COIN_DBL_MAX ? - INF : val;
+		  }
 		  void CbcMip::_setRowUpperBound(int i, Value up) {
 		    LEMON_ASSERT(up != -INF, "Invalid bound");
 		    _prob->setRowUpper(i, up == INF ? COIN_DBL_MAX : up);
+		  }
 		  CbcMip::Value CbcMip::_getRowUpperBound(int i) const {
 		    double val = _prob->getRowUpper(i);
 		    return val == COIN_DBL_MAX ? INF : val;
+		  }
 		  void CbcMip::_setObjCoeffs(ExprIterator b, ExprIterator e) {
 		    int num = _prob->numberColumns();
 		    for (int i = 0; i < num; ++i) {
 		      _prob->setColumnObjective(i, 0.0);
+		    }
 		    for (ExprIterator it = b; it != e; ++it) {
 		      _prob->setColumnObjective(it->first, it->second);
+		    }
+		  }
 		  void CbcMip::_getObjCoeffs(InsertIterator b) const {
 		    int num = _prob->numberColumns();
 		    for (int i = 0; i < num; ++i) {
 		      Value coef = _prob->getColumnObjective(i);
 		      if (coef != 0.0) {
 		        *b = std::make_pair(i, coef);
 		        ++b;
+		      }
+		    }
+		  }
 		  void CbcMip::_setObjCoeff(int i, Value obj_coef) {
 		    _prob->setColumnObjective(i, obj_coef);
+		  }
 		  CbcMip::Value CbcMip::_getObjCoeff(int i) const {
 		    return _prob->getColumnObjective(i);
+		  }
 		  CbcMip::SolveExitStatus CbcMip::_solve() {
 		    if (_osi_solver) {
 		      delete _osi_solver;
+		    }
 		#ifdef COIN_HAS_CLP
 		    _osi_solver = new OsiClpSolverInterface();
 		#elif COIN_HAS_OSL
 		    _osi_solver = new OsiOslSolverInterface();
 		#else
 		#error Cannot instantiate Osi solver
 		#endif
 		    _osi_solver->loadFromCoinModel(*_prob);
 		    if (_cbc_model) {
 		      delete _cbc_model;
+		    }
 		    _cbc_model= new CbcModel(*_osi_solver);
 		    _osi_solver->messageHandler()->setLogLevel(_message_level);
 		    _cbc_model->setLogLevel(_message_level);
 		    _cbc_model->initialSolve();
 		    _cbc_model->solver()->setHintParam(OsiDoReducePrint, true, OsiHintTry);
 		    if (!_cbc_model->isInitialSolveAbandoned() &&
 		        _cbc_model->isInitialSolveProvenOptimal() &&
 		        !_cbc_model->isInitialSolveProvenPrimalInfeasible() &&
 		        !_cbc_model->isInitialSolveProvenDualInfeasible()) {
 		      CglProbing generator1;
 		      generator1.setUsingObjective(true);
 		      generator1.setMaxPass(3);
 		      generator1.setMaxProbe(100);
 		      generator1.setMaxLook(50);
 		      generator1.setRowCuts(3);
 		      _cbc_model->addCutGenerator(&generator1, -1, "Probing");
 		      CglGomory generator2;
 		      generator2.setLimit(300);
 		      _cbc_model->addCutGenerator(&generator2, -1, "Gomory");
 		      CglKnapsackCover generator3;
 		      _cbc_model->addCutGenerator(&generator3, -1, "Knapsack");
 		      CglOddHole generator4;
 		      generator4.setMinimumViolation(0.005);
 		      generator4.setMinimumViolationPer(0.00002);
 		      generator4.setMaximumEntries(200);
 		      _cbc_model->addCutGenerator(&generator4, -1, "OddHole");
 		      CglClique generator5;
 		      generator5.setStarCliqueReport(false);
 		      generator5.setRowCliqueReport(false);
 		      _cbc_model->addCutGenerator(&generator5, -1, "Clique");
 		      CglMixedIntegerRounding mixedGen;
 		      _cbc_model->addCutGenerator(&mixedGen, -1, "MixedIntegerRounding");
 		      CglFlowCover flowGen;
 		      _cbc_model->addCutGenerator(&flowGen, -1, "FlowCover");
 		#ifdef COIN_HAS_CLP
 		      OsiClpSolverInterface* osiclp =
 		        dynamic_cast<OsiClpSolverInterface*>(_cbc_model->solver());
 		      if (osiclp->getNumRows() < 300 && osiclp->getNumCols() < 500) {
 		        osiclp->setupForRepeatedUse(2, 0);
+		      }
 		#endif
 		      CbcRounding heuristic1(*_cbc_model);
 		      heuristic1.setWhen(3);
 		      _cbc_model->addHeuristic(&heuristic1);
 		      CbcHeuristicLocal heuristic2(*_cbc_model);
 		      heuristic2.setWhen(3);
 		      _cbc_model->addHeuristic(&heuristic2);
 		      CbcHeuristicGreedyCover heuristic3(*_cbc_model);
 		      heuristic3.setAlgorithm(11);
 		      heuristic3.setWhen(3);
 		      _cbc_model->addHeuristic(&heuristic3);
 		      CbcHeuristicFPump heuristic4(*_cbc_model);
 		      heuristic4.setWhen(3);
 		      _cbc_model->addHeuristic(&heuristic4);
 		      CbcHeuristicRINS heuristic5(*_cbc_model);
 		      heuristic5.setWhen(3);
 		      _cbc_model->addHeuristic(&heuristic5);
 		      if (_cbc_model->getNumCols() < 500) {
 		        _cbc_model->setMaximumCutPassesAtRoot(-100);
 		      } else if (_cbc_model->getNumCols() < 5000) {
 		        _cbc_model->setMaximumCutPassesAtRoot(100);
 		      } else {

lemon/cbc.h

Show inline comments

 		/* -*- mode: C++; indent-tabs-mode: nil; -*-
+		 *
 		 * This file is a part of LEMON, a generic C++ optimization library.
+		 *
 		 * Copyright (C) 2003-2009
 		 * Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
 		 * (Egervary Research Group on Combinatorial Optimization, EGRES).
+		 *
 		 * Permission to use, modify and distribute this software is granted
 		 * provided that this copyright notice appears in all copies. For
 		 * precise terms see the accompanying LICENSE file.
+		 *
 		 * This software is provided "AS IS" with no warranty of any kind,
 		 * express or implied, and with no claim as to its suitability for any
 		 * purpose.
+		 *
 		 */
 		// -*- C++ -*-
 		#ifndef LEMON_CBC_H
 		#define LEMON_CBC_H
 		///\file
 		///\brief Header of the LEMON-CBC mip solver interface.
 		///\ingroup lp_group
 		#include <lemon/lp_base.h>
 		class CoinModel;
 		class OsiSolverInterface;
 		class CbcModel;
 		namespace lemon {
 		  /// \brief Interface for the CBC MIP solver
 		  ///
 		  /// This class implements an interface for the CBC MIP solver.
 		  ///\ingroup lp_group
 		  class CbcMip : public MipSolver {
 		  protected:
 		    CoinModel *_prob;
 		    OsiSolverInterface *_osi_solver;
 		    CbcModel *_cbc_model;
 		  public:
 		    /// \e
 		    CbcMip();
 		    /// \e
 		    CbcMip(const CbcMip&);
 		    /// \e
 		    ~CbcMip();
 		    /// \e
 		    virtual CbcMip* newSolver() const;
 		    /// \e
 		    virtual CbcMip* cloneSolver() const;
 		  protected:
 		    virtual const char* _solverName() const;
 		    virtual int _addCol();
 		    virtual int _addRow();
 		    virtual int _addRow(Value l, ExprIterator b, ExprIterator e, Value u);
 		    virtual void _eraseCol(int i);
 		    virtual void _eraseRow(int i);
 		    virtual void _eraseColId(int i);
 		    virtual void _eraseRowId(int i);
 		    virtual void _getColName(int col, std::string& name) const;
 		    virtual void _setColName(int col, const std::string& name);
 		    virtual int _colByName(const std::string& name) const;
 		    virtual void _getRowName(int row, std::string& name) const;
 		    virtual void _setRowName(int row, const std::string& name);
 		    virtual int _rowByName(const std::string& name) const;
 		    virtual void _setRowCoeffs(int i, ExprIterator b, ExprIterator e);
 		    virtual void _getRowCoeffs(int i, InsertIterator b) const;
 		    virtual void _setColCoeffs(int i, ExprIterator b, ExprIterator e);
 		    virtual void _getColCoeffs(int i, InsertIterator b) const;
 		    virtual void _setCoeff(int row, int col, Value value);
 		    virtual Value _getCoeff(int row, int col) const;
 		    virtual void _setColLowerBound(int i, Value value);
 		    virtual Value _getColLowerBound(int i) const;
 		    virtual void _setColUpperBound(int i, Value value);
 		    virtual Value _getColUpperBound(int i) const;
 		    virtual void _setRowLowerBound(int i, Value value);
 		    virtual Value _getRowLowerBound(int i) const;
 		    virtual void _setRowUpperBound(int i, Value value);
 		    virtual Value _getRowUpperBound(int i) const;
 		    virtual void _setObjCoeffs(ExprIterator b, ExprIterator e);
 		    virtual void _getObjCoeffs(InsertIterator b) const;
 		    virtual void _setObjCoeff(int i, Value obj_coef);
 		    virtual Value _getObjCoeff(int i) const;
 		    virtual void _setSense(Sense sense);
 		    virtual Sense _getSense() const;
 		    virtual ColTypes _getColType(int col) const;
 		    virtual void _setColType(int col, ColTypes col_type);
 		    virtual SolveExitStatus _solve();
 		    virtual ProblemType _getType() const;
 		    virtual Value _getSol(int i) const;
 		    virtual Value _getSolValue() const;
 		    virtual void _clear();
 		    virtual void _messageLevel(MessageLevel level);
 		    void _applyMessageLevel();
 		    int _message_level;
 		  };
+		}
 		#endif

lemon/clp.cc

Show inline comments

/* -*- mode: C++; indent-tabs-mode: nil; -*-
 *
 * This file is a part of LEMON, a generic C++ optimization library.
 *
 * Copyright (C) 2003-2008
 * Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
 * (Egervary Research Group on Combinatorial Optimization, EGRES).
 *
 * Permission to use, modify and distribute this software is granted
 * provided that this copyright notice appears in all copies. For
 * precise terms see the accompanying LICENSE file.
 *
 * This software is provided "AS IS" with no warranty of any kind,
 * express or implied, and with no claim as to its suitability for any
 * purpose.
 *
 */

#include <lemon/clp.h>
#include <coin/ClpSimplex.hpp>

namespace lemon {

  ClpLp::ClpLp() {
    _prob = new ClpSimplex();
    _init_temporals();
    messageLevel(MESSAGE_NOTHING);
  }

  ClpLp::ClpLp(const ClpLp& other) {
    _prob = new ClpSimplex(*other._prob);
    rows = other.rows;
    cols = other.cols;
    _init_temporals();
    messageLevel(MESSAGE_NOTHING);
  }

  ClpLp::~ClpLp() {
    delete _prob;
    _clear_temporals();
  }

  void ClpLp::_init_temporals() {
    _primal_ray = 0;
    _dual_ray = 0;
  }

  void ClpLp::_clear_temporals() {
    if (_primal_ray) {
      delete[] _primal_ray;
      _primal_ray = 0;
    }
    if (_dual_ray) {
      delete[] _dual_ray;
      _dual_ray = 0;
    }
  }

  ClpLp* ClpLp::newSolver() const {
    ClpLp* newlp = new ClpLp;
    return newlp;
  }

  ClpLp* ClpLp::cloneSolver() const {
    ClpLp* copylp = new ClpLp(*this);
    return copylp;
  }

  const char* ClpLp::_solverName() const { return "ClpLp"; }

  int ClpLp::_addCol() {
    _prob->addColumn(0, 0, 0, -COIN_DBL_MAX, COIN_DBL_MAX, 0.0);
    return _prob->numberColumns() - 1;
  }

  int ClpLp::_addRow() {
    _prob->addRow(0, 0, 0, -COIN_DBL_MAX, COIN_DBL_MAX);
    return _prob->numberRows() - 1;
  }

  int ClpLp::_addRow(Value l, ExprIterator b, ExprIterator e, Value u) {
    std::vector<int> indexes;
    std::vector<Value> values;

    for(ExprIterator it = b; it != e; ++it) {
      indexes.push_back(it->first);
      values.push_back(it->second);
    }

    _prob->addRow(values.size(), &indexes.front(), &values.front(), l, u);
    return _prob->numberRows() - 1;
  }


  void ClpLp::_eraseCol(int c) {
    _col_names_ref.erase(_prob->getColumnName(c));
    _prob->deleteColumns(1, &c);
  }

  void ClpLp::_eraseRow(int r) {
    _row_names_ref.erase(_prob->getRowName(r));
    _prob->deleteRows(1, &r);
  }

  void ClpLp::_eraseColId(int i) {
    cols.eraseIndex(i);
    cols.shiftIndices(i);
  }

  void ClpLp::_eraseRowId(int i) {
    rows.eraseIndex(i);
    rows.shiftIndices(i);
  }

  void ClpLp::_getColName(int c, std::string& name) const {
    name = _prob->getColumnName(c);
  }

  void ClpLp::_setColName(int c, const std::string& name) {
    _prob->setColumnName(c, const_cast<std::string&>(name));
    _col_names_ref[name] = c;
  }

  int ClpLp::_colByName(const std::string& name) const {
    std::map<std::string, int>::const_iterator it = _col_names_ref.find(name);
    return it != _col_names_ref.end() ? it->second : -1;
  }

  void ClpLp::_getRowName(int r, std::string& name) const {
    name = _prob->getRowName(r);
  }

  void ClpLp::_setRowName(int r, const std::string& name) {
    _prob->setRowName(r, const_cast<std::string&>(name));
    _row_names_ref[name] = r;
  }

  int ClpLp::_rowByName(const std::string& name) const {
    std::map<std::string, int>::const_iterator it = _row_names_ref.find(name);
    return it != _row_names_ref.end() ? it->second : -1;
  }


  void ClpLp::_setRowCoeffs(int ix, ExprIterator b, ExprIterator e) {
    std::map<int, Value> coeffs;

    int n = _prob->clpMatrix()->getNumCols();

    const int* indices = _prob->clpMatrix()->getIndices();
    const double* elements = _prob->clpMatrix()->getElements();

    for (int i = 0; i < n; ++i) {
      CoinBigIndex begin = _prob->clpMatrix()->getVectorStarts()[i];
      CoinBigIndex end = begin + _prob->clpMatrix()->getVectorLengths()[i];

      const int* it = std::lower_bound(indices + begin, indices + end, ix);
      if (it != indices + end && *it == ix && elements[it - indices] != 0.0) {
        coeffs[i] = 0.0;
      }
    }

    for (ExprIterator it = b; it != e; ++it) {
      coeffs[it->first] = it->second;
    }

    for (std::map<int, Value>::iterator it = coeffs.begin();
         it != coeffs.end(); ++it) {
      _prob->modifyCoefficient(ix, it->first, it->second);
    }
  }

  void ClpLp::_getRowCoeffs(int ix, InsertIterator b) const {
    int n = _prob->clpMatrix()->getNumCols();

    const int* indices = _prob->clpMatrix()->getIndices();
    const double* elements = _prob->clpMatrix()->getElements();

    for (int i = 0; i < n; ++i) {
      CoinBigIndex begin = _prob->clpMatrix()->getVectorStarts()[i];
      CoinBigIndex end = begin + _prob->clpMatrix()->getVectorLengths()[i];

      const int* it = std::lower_bound(indices + begin, indices + end, ix);
      if (it != indices + end && *it == ix) {
        *b = std::make_pair(i, elements[it - indices]);
      }
    }
  }

  void ClpLp::_setColCoeffs(int ix, ExprIterator b, ExprIterator e) {
    std::map<int, Value> coeffs;

    CoinBigIndex begin = _prob->clpMatrix()->getVectorStarts()[ix];
    CoinBigIndex end = begin + _prob->clpMatrix()->getVectorLengths()[ix];

    const int* indices = _prob->clpMatrix()->getIndices();
    const double* elements = _prob->clpMatrix()->getElements();

    for (CoinBigIndex i = begin; i != end; ++i) {
      if (elements[i] != 0.0) {
        coeffs[indices[i]] = 0.0;
      }
    }
    for (ExprIterator it = b; it != e; ++it) {
      coeffs[it->first] = it->second;
    }
    for (std::map<int, Value>::iterator it = coeffs.begin();
         it != coeffs.end(); ++it) {
      _prob->modifyCoefficient(it->first, ix, it->second);
    }
  }

  void ClpLp::_getColCoeffs(int ix, InsertIterator b) const {
    CoinBigIndex begin = _prob->clpMatrix()->getVectorStarts()[ix];
    CoinBigIndex end = begin + _prob->clpMatrix()->getVectorLengths()[ix];

    const int* indices = _prob->clpMatrix()->getIndices();
    const double* elements = _prob->clpMatrix()->getElements();

    for (CoinBigIndex i = begin; i != end; ++i) {
      *b = std::make_pair(indices[i], elements[i]);
      ++b;
    }
  }

  void ClpLp::_setCoeff(int ix, int jx, Value value) {
    _prob->modifyCoefficient(ix, jx, value);
  }

  ClpLp::Value ClpLp::_getCoeff(int ix, int jx) const {
    CoinBigIndex begin = _prob->clpMatrix()->getVectorStarts()[ix];
    CoinBigIndex end = begin + _prob->clpMatrix()->getVectorLengths()[ix];

    const int* indices = _prob->clpMatrix()->getIndices();
    const double* elements = _prob->clpMatrix()->getElements();

    const int* it = std::lower_bound(indices + begin, indices + end, jx);
    if (it != indices + end && *it == jx) {
      return elements[it - indices];
    } else {
      return 0.0;
    }
  }

  void ClpLp::_setColLowerBound(int i, Value lo) {
    _prob->setColumnLower(i, lo == - INF ? - COIN_DBL_MAX : lo);
  }

  ClpLp::Value ClpLp::_getColLowerBound(int i) const {
    double val = _prob->getColLower()[i];
    return val == - COIN_DBL_MAX ? - INF : val;
  }

  void ClpLp::_setColUpperBound(int i, Value up) {
    _prob->setColumnUpper(i, up == INF ? COIN_DBL_MAX : up);
  }

  ClpLp::Value ClpLp::_getColUpperBound(int i) const {
    double val = _prob->getColUpper()[i];
    return val == COIN_DBL_MAX ? INF : val;
  }

  void ClpLp::_setRowLowerBound(int i, Value lo) {
    _prob->setRowLower(i, lo == - INF ? - COIN_DBL_MAX : lo);
  }

  ClpLp::Value ClpLp::_getRowLowerBound(int i) const {
    double val = _prob->getRowLower()[i];
    return val == - COIN_DBL_MAX ? - INF : val;
  }

  void ClpLp::_setRowUpperBound(int i, Value up) {
    _prob->setRowUpper(i, up == INF ? COIN_DBL_MAX : up);
  }

  ClpLp::Value ClpLp::_getRowUpperBound(int i) const {
    double val = _prob->getRowUpper()[i];
    return val == COIN_DBL_MAX ? INF : val;
  }

  void ClpLp::_setObjCoeffs(ExprIterator b, ExprIterator e) {
    int num = _prob->clpMatrix()->getNumCols();
    for (int i = 0; i < num; ++i) {
      _prob->setObjectiveCoefficient(i, 0.0);
    }
    for (ExprIterator it = b; it != e; ++it) {
      _prob->setObjectiveCoefficient(it->first, it->second);
    }
  }

  void ClpLp::_getObjCoeffs(InsertIterator b) const {
    int num = _prob->clpMatrix()->getNumCols();
    for (int i = 0; i < num; ++i) {
      Value coef = _prob->getObjCoefficients()[i];
      if (coef != 0.0) {
        *b = std::make_pair(i, coef);
        ++b;
      }
    }
  }

  void ClpLp::_setObjCoeff(int i, Value obj_coef) {
    _prob->setObjectiveCoefficient(i, obj_coef);
  }

  ClpLp::Value ClpLp::_getObjCoeff(int i) const {
    return _prob->getObjCoefficients()[i];
  }

  ClpLp::SolveExitStatus ClpLp::_solve() {
    return _prob->primal() >= 0 ? SOLVED : UNSOLVED;
  }

  ClpLp::SolveExitStatus ClpLp::solvePrimal() {
    return _prob->primal() >= 0 ? SOLVED : UNSOLVED;
  }

  ClpLp::SolveExitStatus ClpLp::solveDual() {
    return _prob->dual() >= 0 ? SOLVED : UNSOLVED;
  }

  ClpLp::SolveExitStatus ClpLp::solveBarrier() {
    return _prob->barrier() >= 0 ? SOLVED : UNSOLVED;
  }

  ClpLp::Value ClpLp::_getPrimal(int i) const {
    return _prob->primalColumnSolution()[i];
  }
  ClpLp::Value ClpLp::_getPrimalValue() const {
    return _prob->objectiveValue();
  }

  ClpLp::Value ClpLp::_getDual(int i) const {
    return _prob->dualRowSolution()[i];
  }

  ClpLp::Value ClpLp::_getPrimalRay(int i) const {
    if (!_primal_ray) {
      _primal_ray = _prob->unboundedRay();
      LEMON_ASSERT(_primal_ray != 0, "Primal ray is not provided");
    }
    return _primal_ray[i];
  }

  ClpLp::Value ClpLp::_getDualRay(int i) const {
    if (!_dual_ray) {
      _dual_ray = _prob->infeasibilityRay();
      LEMON_ASSERT(_dual_ray != 0, "Dual ray is not provided");
    }
    return _dual_ray[i];

lemon/clp.h

Show inline comments

 		/* -*- mode: C++; indent-tabs-mode: nil; -*-
+		 *
 		 * This file is a part of LEMON, a generic C++ optimization library.
+		 *
 		 * Copyright (C) 2003-2008
 		 * Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
 		 * (Egervary Research Group on Combinatorial Optimization, EGRES).
+		 *
 		 * Permission to use, modify and distribute this software is granted
 		 * provided that this copyright notice appears in all copies. For
 		 * precise terms see the accompanying LICENSE file.
+		 *
 		 * This software is provided "AS IS" with no warranty of any kind,
 		 * express or implied, and with no claim as to its suitability for any
 		 * purpose.
+		 *
 		 */
 		#ifndef LEMON_CLP_H
 		#define LEMON_CLP_H
 		///\file
 		///\brief Header of the LEMON-CLP lp solver interface.
 		#include <vector>
 		#include <string>
 		#include <lemon/lp_base.h>
 		class ClpSimplex;
 		namespace lemon {
 		  /// \ingroup lp_group
 		  ///
 		  /// \brief Interface for the CLP solver
 		  ///
 		  /// This class implements an interface for the Clp LP solver.  The
 		  /// Clp library is an object oriented lp solver library developed at
 		  /// the IBM. The CLP is part of the COIN-OR package and it can be
 		  /// used with Common Public License.
 		  class ClpLp : public LpSolver {
 		  protected:
 		    ClpSimplex* _prob;
 		    std::map<std::string, int> _col_names_ref;
 		    std::map<std::string, int> _row_names_ref;
 		  public:
 		    /// \e
 		    ClpLp();
 		    /// \e
 		    ClpLp(const ClpLp&);
 		    /// \e
 		    ~ClpLp();
 		    /// \e
 		    virtual ClpLp* newSolver() const;
 		    /// \e
 		    virtual ClpLp* cloneSolver() const;
 		  protected:
 		    mutable double* _primal_ray;
 		    mutable double* _dual_ray;
 		    void _init_temporals();
 		    void _clear_temporals();
 		  protected:
 		    virtual const char* _solverName() const;
 		    virtual int _addCol();
 		    virtual int _addRow();
 		    virtual int _addRow(Value l, ExprIterator b, ExprIterator e, Value u);
 		    virtual void _eraseCol(int i);
 		    virtual void _eraseRow(int i);
 		    virtual void _eraseColId(int i);
 		    virtual void _eraseRowId(int i);
 		    virtual void _getColName(int col, std::string& name) const;
 		    virtual void _setColName(int col, const std::string& name);
 		    virtual int _colByName(const std::string& name) const;
 		    virtual void _getRowName(int row, std::string& name) const;
 		    virtual void _setRowName(int row, const std::string& name);
 		    virtual int _rowByName(const std::string& name) const;
 		    virtual void _setRowCoeffs(int i, ExprIterator b, ExprIterator e);
 		    virtual void _getRowCoeffs(int i, InsertIterator b) const;
 		    virtual void _setColCoeffs(int i, ExprIterator b, ExprIterator e);
 		    virtual void _getColCoeffs(int i, InsertIterator b) const;
 		    virtual void _setCoeff(int row, int col, Value value);
 		    virtual Value _getCoeff(int row, int col) const;
 		    virtual void _setColLowerBound(int i, Value value);
 		    virtual Value _getColLowerBound(int i) const;
 		    virtual void _setColUpperBound(int i, Value value);
 		    virtual Value _getColUpperBound(int i) const;
 		    virtual void _setRowLowerBound(int i, Value value);
 		    virtual Value _getRowLowerBound(int i) const;
 		    virtual void _setRowUpperBound(int i, Value value);
 		    virtual Value _getRowUpperBound(int i) const;
 		    virtual void _setObjCoeffs(ExprIterator, ExprIterator);
 		    virtual void _getObjCoeffs(InsertIterator) const;
 		    virtual void _setObjCoeff(int i, Value obj_coef);
 		    virtual Value _getObjCoeff(int i) const;
 		    virtual void _setSense(Sense sense);
 		    virtual Sense _getSense() const;
 		    virtual SolveExitStatus _solve();
 		    virtual Value _getPrimal(int i) const;
 		    virtual Value _getDual(int i) const;
 		    virtual Value _getPrimalValue() const;
 		    virtual Value _getPrimalRay(int i) const;
 		    virtual Value _getDualRay(int i) const;
 		    virtual VarStatus _getColStatus(int i) const;
 		    virtual VarStatus _getRowStatus(int i) const;
 		    virtual ProblemType _getPrimalType() const;
 		    virtual ProblemType _getDualType() const;
 		    virtual void _clear();
 		    virtual void _messageLevel(MessageLevel);
 		  public:
 		    ///Solves LP with primal simplex method.
 		    SolveExitStatus solvePrimal();
 		    ///Solves LP with dual simplex method.
 		    SolveExitStatus solveDual();
 		    ///Solves LP with barrier method.
 		    SolveExitStatus solveBarrier();
 		    ///Returns the constraint identifier understood by CLP.
 		    int clpRow(Row r) const { return rows(id(r)); }
 		    ///Returns the variable identifier understood by CLP.
 		    int clpCol(Col c) const { return cols(id(c)); }
 		  };
 		} //END OF NAMESPACE LEMON
 		#endif //LEMON_CLP_H

lemon/concepts/digraph.h

Show inline comments

 		/* -*- mode: C++; indent-tabs-mode: nil; -*-
+		 *
 		 * This file is a part of LEMON, a generic C++ optimization library.
+		 *
 		 * Copyright (C) 2003-2009
 		 * Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
 		 * (Egervary Research Group on Combinatorial Optimization, EGRES).
+		 *
 		 * Permission to use, modify and distribute this software is granted
 		 * provided that this copyright notice appears in all copies. For
 		 * precise terms see the accompanying LICENSE file.
+		 *
 		 * This software is provided "AS IS" with no warranty of any kind,
 		 * express or implied, and with no claim as to its suitability for any
 		 * purpose.
+		 *
 		 */
 		#ifndef LEMON_CONCEPTS_DIGRAPH_H
 		#define LEMON_CONCEPTS_DIGRAPH_H
 		///\ingroup graph_concepts
 		///\file
 		///\brief The concept of directed graphs.
 		#include <lemon/core.h>
 		#include <lemon/concepts/maps.h>
 		#include <lemon/concept_check.h>
 		#include <lemon/concepts/graph_components.h>
 		namespace lemon {
 		  namespace concepts {
 		    /// \ingroup graph_concepts
 		    ///
 		    /// \brief Class describing the concept of directed graphs.
 		    ///
 		    /// This class describes the \ref concept "concept" of the
 		    /// immutable directed digraphs.
 		    /// This class describes the common interface of all directed
 		    /// graphs (digraphs).
 		    ///
 		    /// Note that actual digraph implementation like @ref ListDigraph or
 		    /// @ref SmartDigraph may have several additional functionality.
 		    /// Like all concept classes, it only provides an interface
 		    /// without any sensible implementation. So any general algorithm for
 		    /// directed graphs should compile with this class, but it will not
 		    /// run properly, of course.
 		    /// An actual digraph implementation like \ref ListDigraph or
 		    /// \ref SmartDigraph may have additional functionality.
 		    ///
-		    /// \sa concept
+		    /// \sa Graph
 		    class Digraph {
 		    private:
-		      ///Digraphs are \e not copy constructible. Use DigraphCopy() instead.
+		      /// Diraphs are \e not copy constructible. Use DigraphCopy instead.
 		      Digraph(const Digraph &) {}
 		      /// \brief Assignment of a digraph to another one is \e not allowed.
 		      /// Use DigraphCopy instead.
 		      void operator=(const Digraph &) {}
 		      ///Digraphs are \e not copy constructible. Use DigraphCopy() instead.
 		      ///
 		      Digraph(const Digraph &) {};
 		      ///\brief Assignment of \ref Digraph "Digraph"s to another ones are
-		      ///\e not allowed. Use DigraphCopy() instead.
+		    public:
 		      /// Default constructor.
 		      Digraph() { }
 		      ///Assignment of \ref Digraph "Digraph"s to another ones are
 		      ///\e not allowed.  Use DigraphCopy() instead.
 		      void operator=(const Digraph &) {}
 		    public:
 		      ///\e
 		      /// Defalult constructor.
 		      /// Defalult constructor.
 		      ///
 		      Digraph() { }
-		      /// Class for identifying a node of the digraph
+		      /// The node type of the digraph
 		      /// This class identifies a node of the digraph. It also serves
 		      /// as a base class of the node iterators,
-		      /// thus they will convert to this type.
 		      /// thus they convert to this type.
 		      class Node {
 		      public:
 		        /// Default constructor
 		        /// @warning The default constructor sets the iterator
 		        /// to an undefined value.
 		        /// Default constructor.
 		        /// \warning It sets the object to an undefined value.
 		        Node() { }
 		        /// Copy constructor.
 		        /// Copy constructor.
 		        ///
 		        Node(const Node&) { }
 		        /// Invalid constructor \& conversion.
+		        /// %Invalid constructor \& conversion.
-		        /// This constructor initializes the iterator to be invalid.
+		        /// Initializes the object to be invalid.
 		        /// \sa Invalid for more details.
 		        Node(Invalid) { }
 		        /// Equality operator
 		        /// Equality operator.
 		        ///
 		        /// Two iterators are equal if and only if they point to the
-		        /// same object or both are invalid.
+		        /// same object or both are \c INVALID.
 		        bool operator==(Node) const { return true; }
 		        /// Inequality operator
 		        /// \sa operator==(Node n)
 		        ///
 		        /// Inequality operator.
 		        bool operator!=(Node) const { return true; }
 		        /// Artificial ordering operator.
 		        /// To allow the use of digraph descriptors as key type in std::map or
 		        /// similar associative container we require this.
 		        /// Artificial ordering operator.
 		        ///
 		        /// \note This operator only have to define some strict ordering of
 		        /// the items; this order has nothing to do with the iteration
-		        /// ordering of the items.
+		        /// \note This operator only has to define some strict ordering of
 		        /// the nodes; this order has nothing to do with the iteration
 		        /// ordering of the nodes.
 		        bool operator<(Node) const { return false; }
 		      };
-		      /// This iterator goes through each node.
+		      /// Iterator class for the nodes.
 		      /// This iterator goes through each node.
+		      /// This iterator goes through each node of the digraph.
 		      /// Its usage is quite simple, for example you can count the number
 		      /// of nodes in digraph \c g of type \c Digraph like this:
+		      /// of nodes in a digraph \c g of type \c %Digraph like this:
 		      ///\code
 		      /// int count=0;
 		      /// for (Digraph::NodeIt n(g); n!=INVALID; ++n) ++count;
 		      ///\endcode
 		      class NodeIt : public Node {
 		      public:
 		        /// Default constructor
 		        /// @warning The default constructor sets the iterator
 		        /// to an undefined value.
 		        /// Default constructor.
 		        /// \warning It sets the iterator to an undefined value.
 		        NodeIt() { }
 		        /// Copy constructor.
 		        /// Copy constructor.
 		        ///
 		        NodeIt(const NodeIt& n) : Node(n) { }
 		        /// Invalid constructor \& conversion.
+		        /// %Invalid constructor \& conversion.
-		        /// Initialize the iterator to be invalid.
+		        /// Initializes the iterator to be invalid.
 		        /// \sa Invalid for more details.
 		        NodeIt(Invalid) { }
 		        /// Sets the iterator to the first node.
-		        /// Sets the iterator to the first node of \c g.
+		        /// Sets the iterator to the first node of the given digraph.
 		        ///
 		        NodeIt(const Digraph&) { }
 		        /// Node -> NodeIt conversion.
 		        explicit NodeIt(const Digraph&) { }
 		        /// Sets the iterator to the given node.
 		        /// Sets the iterator to the node of \c the digraph pointed by
 		        /// the trivial iterator.
 		        /// This feature necessitates that each time we
 		        /// iterate the arc-set, the iteration order is the same.
 		        /// Sets the iterator to the given node of the given digraph.
 		        ///
 		        NodeIt(const Digraph&, const Node&) { }
 		        /// Next node.
 		        /// Assign the iterator to the next node.
 		        ///
 		        NodeIt& operator++() { return *this; }
 		      };
-		      /// Class for identifying an arc of the digraph
+		      /// The arc type of the digraph
 		      /// This class identifies an arc of the digraph. It also serves
 		      /// as a base class of the arc iterators,
 		      /// thus they will convert to this type.
 		      class Arc {
 		      public:
 		        /// Default constructor
 		        /// @warning The default constructor sets the iterator
 		        /// to an undefined value.
 		        /// Default constructor.
 		        /// \warning It sets the object to an undefined value.
 		        Arc() { }
 		        /// Copy constructor.
 		        /// Copy constructor.
 		        ///
 		        Arc(const Arc&) { }
-		        /// Initialize the iterator to be invalid.
+		        /// %Invalid constructor \& conversion.
 		        /// Initialize the iterator to be invalid.
 		        ///
 		        /// Initializes the object to be invalid.
 		        /// \sa Invalid for more details.
 		        Arc(Invalid) { }
 		        /// Equality operator
 		        /// Equality operator.
 		        ///
 		        /// Two iterators are equal if and only if they point to the
-		        /// same object or both are invalid.
+		        /// same object or both are \c INVALID.
 		        bool operator==(Arc) const { return true; }
 		        /// Inequality operator
 		        /// \sa operator==(Arc n)
 		        ///
 		        /// Inequality operator.
 		        bool operator!=(Arc) const { return true; }
 		        /// Artificial ordering operator.
 		        /// To allow the use of digraph descriptors as key type in std::map or
 		        /// similar associative container we require this.
 		        /// Artificial ordering operator.
 		        ///
 		        /// \note This operator only have to define some strict ordering of
 		        /// the items; this order has nothing to do with the iteration
-		        /// ordering of the items.
+		        /// \note This operator only has to define some strict ordering of
 		        /// the arcs; this order has nothing to do with the iteration
 		        /// ordering of the arcs.
 		        bool operator<(Arc) const { return false; }
 		      };
-		      /// This iterator goes trough the outgoing arcs of a node.
+		      /// Iterator class for the outgoing arcs of a node.
 		      /// This iterator goes trough the \e outgoing arcs of a certain node
 		      /// of a digraph.
 		      /// Its usage is quite simple, for example you can count the number
 		      /// of outgoing arcs of a node \c n
 		      /// in digraph \c g of type \c Digraph as follows.
+		      /// in a digraph \c g of type \c %Digraph as follows.
 		      ///\code
 		      /// int count=0;
-		      /// for (Digraph::OutArcIt e(g, n); e!=INVALID; ++e) ++count;
+		      /// for (Digraph::OutArcIt a(g, n); a!=INVALID; ++a) ++count;
 		      ///\endcode
 		      class OutArcIt : public Arc {
 		      public:
 		        /// Default constructor
 		        /// @warning The default constructor sets the iterator
 		        /// to an undefined value.
 		        /// Default constructor.
 		        /// \warning It sets the iterator to an undefined value.
 		        OutArcIt() { }
 		        /// Copy constructor.
 		        /// Copy constructor.
 		        ///
 		        OutArcIt(const OutArcIt& e) : Arc(e) { }
-		        /// Initialize the iterator to be invalid.
+		        /// %Invalid constructor \& conversion.
-		        /// Initialize the iterator to be invalid.
+		        /// Initializes the iterator to be invalid.
 		        /// \sa Invalid for more details.
 		        OutArcIt(Invalid) { }
 		        /// Sets the iterator to the first outgoing arc.
 		        /// Sets the iterator to the first outgoing arc of the given node.
 		        ///
 		        OutArcIt(Invalid) { }
 		        /// This constructor sets the iterator to the first outgoing arc.
 		        OutArcIt(const Digraph&, const Node&) { }
 		        /// Sets the iterator to the given arc.
 		        /// This constructor sets the iterator to the first outgoing arc of
 		        /// the node.
 		        OutArcIt(const Digraph&, const Node&) { }
 		        /// Arc -> OutArcIt conversion
 		        /// Sets the iterator to the value of the trivial iterator.
 		        /// This feature necessitates that each time we
 		        /// iterate the arc-set, the iteration order is the same.
 		        /// Sets the iterator to the given arc of the given digraph.
 		        ///
 		        OutArcIt(const Digraph&, const Arc&) { }
 		        ///Next outgoing arc
+		        /// Next outgoing arc
 		        /// Assign the iterator to the next
 		        /// outgoing arc of the corresponding node.
 		        OutArcIt& operator++() { return *this; }
 		      };
-		      /// This iterator goes trough the incoming arcs of a node.
+		      /// Iterator class for the incoming arcs of a node.
 		      /// This iterator goes trough the \e incoming arcs of a certain node
 		      /// of a digraph.
 		      /// Its usage is quite simple, for example you can count the number
 		      /// of outgoing arcs of a node \c n
 		      /// in digraph \c g of type \c Digraph as follows.
 		      /// of incoming arcs of a node \c n
 		      /// in a digraph \c g of type \c %Digraph as follows.
 		      ///\code
 		      /// int count=0;
-		      /// for(Digraph::InArcIt e(g, n); e!=INVALID; ++e) ++count;
+		      /// for(Digraph::InArcIt a(g, n); a!=INVALID; ++a) ++count;
 		      ///\endcode
 		      class InArcIt : public Arc {
 		      public:
 		        /// Default constructor
 		        /// @warning The default constructor sets the iterator
 		        /// to an undefined value.
 		        /// Default constructor.
 		        /// \warning It sets the iterator to an undefined value.
 		        InArcIt() { }
 		        /// Copy constructor.
 		        /// Copy constructor.
 		        ///
 		        InArcIt(const InArcIt& e) : Arc(e) { }
-		        /// Initialize the iterator to be invalid.
+		        /// %Invalid constructor \& conversion.
-		        /// Initialize the iterator to be invalid.
+		        /// Initializes the iterator to be invalid.
 		        /// \sa Invalid for more details.
 		        InArcIt(Invalid) { }
 		        /// Sets the iterator to the first incoming arc.
 		        /// Sets the iterator to the first incoming arc of the given node.
 		        ///
 		        InArcIt(Invalid) { }
 		        /// This constructor sets the iterator to first incoming arc.
 		        InArcIt(const Digraph&, const Node&) { }
 		        /// Sets the iterator to the given arc.
 		        /// This constructor set the iterator to the first incoming arc of
 		        /// the node.
 		        InArcIt(const Digraph&, const Node&) { }
 		        /// Arc -> InArcIt conversion
 		        /// Sets the iterator to the value of the trivial iterator \c e.
 		        /// This feature necessitates that each time we
 		        /// iterate the arc-set, the iteration order is the same.
 		        /// Sets the iterator to the given arc of the given digraph.
 		        ///
 		        InArcIt(const Digraph&, const Arc&) { }
 		        /// Next incoming arc
 		        /// Assign the iterator to the next inarc of the corresponding node.
 		        ///
 		        /// Assign the iterator to the next
 		        /// incoming arc of the corresponding node.
 		        InArcIt& operator++() { return *this; }
 		      };
 		      /// This iterator goes through each arc.
-		      /// This iterator goes through each arc of a digraph.
+		      /// Iterator class for the arcs.
 		      /// This iterator goes through each arc of the digraph.
 		      /// Its usage is quite simple, for example you can count the number
 		      /// of arcs in a digraph \c g of type \c Digraph as follows:
+		      /// of arcs in a digraph \c g of type \c %Digraph as follows:
 		      ///\code
 		      /// int count=0;
-		      /// for(Digraph::ArcIt e(g); e!=INVALID; ++e) ++count;
+		      /// for(Digraph::ArcIt a(g); a!=INVALID; ++a) ++count;
 		      ///\endcode
 		      class ArcIt : public Arc {
 		      public:
 		        /// Default constructor
 		        /// @warning The default constructor sets the iterator
 		        /// to an undefined value.
 		        /// Default constructor.
 		        /// \warning It sets the iterator to an undefined value.
 		        ArcIt() { }
 		        /// Copy constructor.
 		        /// Copy constructor.
 		        ///
 		        ArcIt(const ArcIt& e) : Arc(e) { }
-		        /// Initialize the iterator to be invalid.
+		        /// %Invalid constructor \& conversion.
-		        /// Initialize the iterator to be invalid.
+		        /// Initializes the iterator to be invalid.
 		        /// \sa Invalid for more details.
 		        ArcIt(Invalid) { }
 		        /// Sets the iterator to the first arc.
 		        /// Sets the iterator to the first arc of the given digraph.
 		        ///
 		        ArcIt(Invalid) { }
 		        /// This constructor sets the iterator to the first arc.
 		        explicit ArcIt(const Digraph& g) { ignore_unused_variable_warning(g); }
 		        /// Sets the iterator to the given arc.
 		        /// This constructor sets the iterator to the first arc of \c g.
 		        ///@param g the digraph
 		        ArcIt(const Digraph& g) { ignore_unused_variable_warning(g); }
 		        /// Arc -> ArcIt conversion
 		        /// Sets the iterator to the value of the trivial iterator \c e.
 		        /// This feature necessitates that each time we
 		        /// iterate the arc-set, the iteration order is the same.
 		        /// Sets the iterator to the given arc of the given digraph.
 		        ///
 		        ArcIt(const Digraph&, const Arc&) { }
 		        ///Next arc
+		        /// Next arc
 		        /// Assign the iterator to the next arc.
 		        ///
 		        ArcIt& operator++() { return *this; }
 		      };
 		      ///Gives back the target node of an arc.
-		      ///Gives back the target node of an arc.
+		      /// \brief The source node of the arc.
 		      ///
 		      Node target(Arc) const { return INVALID; }
 		      ///Gives back the source node of an arc.
 		      ///Gives back the source node of an arc.
 		      ///
+		      /// Returns the source node of the given arc.
 		      Node source(Arc) const { return INVALID; }
-		      /// \brief Returns the ID of the node.
+		      /// \brief The target node of the arc.
 		      ///
 		      /// Returns the target node of the given arc.
 		      Node target(Arc) const { return INVALID; }
 		      /// \brief The ID of the node.
 		      ///
 		      /// Returns the ID of the given node.
 		      int id(Node) const { return -1; }
-		      /// \brief Returns the ID of the arc.
+		      /// \brief The ID of the arc.
 		      ///
 		      /// Returns the ID of the given arc.
 		      int id(Arc) const { return -1; }
-		      /// \brief Returns the node with the given ID.
+		      /// \brief The node with the given ID.
 		      ///
-		      /// \pre The argument should be a valid node ID in the graph.
+		      /// Returns the node with the given ID.
 		      /// \pre The argument should be a valid node ID in the digraph.
 		      Node nodeFromId(int) const { return INVALID; }
-		      /// \brief Returns the arc with the given ID.
+		      /// \brief The arc with the given ID.
 		      ///
-		      /// \pre The argument should be a valid arc ID in the graph.
+		      /// Returns the arc with the given ID.
 		      /// \pre The argument should be a valid arc ID in the digraph.
 		      Arc arcFromId(int) const { return INVALID; }
-		      /// \brief Returns an upper bound on the node IDs.
+		      /// \brief An upper bound on the node IDs.
 		      ///
 		      /// Returns an upper bound on the node IDs.
 		      int maxNodeId() const { return -1; }
-		      /// \brief Returns an upper bound on the arc IDs.
+		      /// \brief An upper bound on the arc IDs.
 		      ///
 		      /// Returns an upper bound on the arc IDs.
 		      int maxArcId() const { return -1; }
 		      void first(Node&) const {}
 		      void next(Node&) const {}
 		      void first(Arc&) const {}
 		      void next(Arc&) const {}
 		      void firstIn(Arc&, const Node&) const {}
 		      void nextIn(Arc&) const {}
 		      void firstOut(Arc&, const Node&) const {}
 		      void nextOut(Arc&) const {}
 		      // The second parameter is dummy.
 		      Node fromId(int, Node) const { return INVALID; }
 		      // The second parameter is dummy.
 		      Arc fromId(int, Arc) const { return INVALID; }
 		      // Dummy parameter.
 		      int maxId(Node) const { return -1; }
 		      // Dummy parameter.
 		      int maxId(Arc) const { return -1; }
 		      /// \brief The opposite node on the arc.
 		      ///
 		      /// Returns the opposite node on the given arc.
 		      Node oppositeNode(Node, Arc) const { return INVALID; }
 		      /// \brief The base node of the iterator.
 		      ///
 		      /// Gives back the base node of the iterator.
 		      /// It is always the target of the pointed arc.
-		      Node baseNode(const InArcIt&) const { return INVALID; }
+		      /// Returns the base node of the given outgoing arc iterator
 		      /// (i.e. the source node of the corresponding arc).
 		      Node baseNode(OutArcIt) const { return INVALID; }
 		      /// \brief The running node of the iterator.
 		      ///
 		      /// Gives back the running node of the iterator.
 		      /// It is always the source of the pointed arc.
-		      Node runningNode(const InArcIt&) const { return INVALID; }
+		      /// Returns the running node of the given outgoing arc iterator
 		      /// (i.e. the target node of the corresponding arc).
 		      Node runningNode(OutArcIt) const { return INVALID; }
 		      /// \brief The base node of the iterator.
 		      ///
 		      /// Gives back the base node of the iterator.
 		      /// It is always the source of the pointed arc.
-		      Node baseNode(const OutArcIt&) const { return INVALID; }
+		      /// Returns the base node of the given incomming arc iterator
 		      /// (i.e. the target node of the corresponding arc).
 		      Node baseNode(InArcIt) const { return INVALID; }
 		      /// \brief The running node of the iterator.
 		      ///
 		      /// Gives back the running node of the iterator.
 		      /// It is always the target of the pointed arc.
-		      Node runningNode(const OutArcIt&) const { return INVALID; }
+		      /// Returns the running node of the given incomming arc iterator
 		      /// (i.e. the source node of the corresponding arc).
 		      Node runningNode(InArcIt) const { return INVALID; }
-		      /// \brief The opposite node on the given arc.
+		      /// \brief Standard graph map type for the nodes.
 		      ///
 		      /// Gives back the opposite node on the given arc.
 		      Node oppositeNode(const Node&, const Arc&) const { return INVALID; }
 		      /// \brief Reference map of the nodes to type \c T.
 		      ///
 		      /// Reference map of the nodes to type \c T.
 		      /// Standard graph map type for the nodes.
 		      /// It conforms to the ReferenceMap concept.
 		      template<class T>
 		      class NodeMap : public ReferenceMap<Node, T, T&, const T&> {
 		      public:
 		        ///\e
 		        NodeMap(const Digraph&) { }
-		        ///\e
+		        /// Constructor
 		        explicit NodeMap(const Digraph&) { }
 		        /// Constructor with given initial value
 		        NodeMap(const Digraph&, T) { }
 		      private:
 		        ///Copy constructor
 		        NodeMap(const NodeMap& nm) :
 		          ReferenceMap<Node, T, T&, const T&>(nm) { }
 		        ///Assignment operator
 		        template <typename CMap>
 		        NodeMap& operator=(const CMap&) {
 		          checkConcept<ReadMap<Node, T>, CMap>();
 		          return *this;
+		        }
 		      };
-		      /// \brief Reference map of the arcs to type \c T.
+		      /// \brief Standard graph map type for the arcs.
 		      ///
-		      /// Reference map of the arcs to type \c T.
+		      /// Standard graph map type for the arcs.
 		      /// It conforms to the ReferenceMap concept.
 		      template<class T>
 		      class ArcMap : public ReferenceMap<Arc, T, T&, const T&> {
 		      public:
 		        ///\e
 		        ArcMap(const Digraph&) { }
-		        ///\e
+		        /// Constructor
 		        explicit ArcMap(const Digraph&) { }
 		        /// Constructor with given initial value
 		        ArcMap(const Digraph&, T) { }
 		      private:
 		        ///Copy constructor
 		        ArcMap(const ArcMap& em) :
 		          ReferenceMap<Arc, T, T&, const T&>(em) { }
 		        ///Assignment operator
 		        template <typename CMap>
 		        ArcMap& operator=(const CMap&) {
 		          checkConcept<ReadMap<Arc, T>, CMap>();
 		          return *this;
+		        }
 		      };
 		      template <typename _Digraph>
 		      struct Constraints {
 		        void constraints() {
 		          checkConcept<BaseDigraphComponent, _Digraph>();
 		          checkConcept<IterableDigraphComponent<>, _Digraph>();
 		          checkConcept<IDableDigraphComponent<>, _Digraph>();
 		          checkConcept<MappableDigraphComponent<>, _Digraph>();
+		        }
 		      };
 		    };
 		  } //namespace concepts
 		} //namespace lemon
 		#endif

lemon/concepts/graph.h

Show inline comments

 		/* -*- mode: C++; indent-tabs-mode: nil; -*-
+		 *
 		 * This file is a part of LEMON, a generic C++ optimization library.
+		 *
 		 * Copyright (C) 2003-2009
 		 * Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
 		 * (Egervary Research Group on Combinatorial Optimization, EGRES).
+		 *
 		 * Permission to use, modify and distribute this software is granted
 		 * provided that this copyright notice appears in all copies. For
 		 * precise terms see the accompanying LICENSE file.
+		 *
 		 * This software is provided "AS IS" with no warranty of any kind,
 		 * express or implied, and with no claim as to its suitability for any
 		 * purpose.
+		 *
 		 */
 		///\ingroup graph_concepts
 		///\file
-		///\brief The concept of Undirected Graphs.
+		///\brief The concept of undirected graphs.
 		#ifndef LEMON_CONCEPTS_GRAPH_H
 		#define LEMON_CONCEPTS_GRAPH_H
 		#include <lemon/concepts/graph_components.h>
 		#include <lemon/concepts/maps.h>
 		#include <lemon/concept_check.h>
 		#include <lemon/core.h>
 		namespace lemon {
 		  namespace concepts {
 		    /// \ingroup graph_concepts
 		    ///
-		    /// \brief Class describing the concept of Undirected Graphs.
+		    /// \brief Class describing the concept of undirected graphs.
 		    ///
 		    /// This class describes the common interface of all Undirected
 		    /// Graphs.
 		    /// This class describes the common interface of all undirected
 		    /// graphs.
 		    ///
 		    /// As all concept describing classes it provides only interface
 		    /// without any sensible implementation. So any algorithm for
-		    /// undirected graph should compile with this class, but it will not
+		    /// Like all concept classes, it only provides an interface
 		    /// without any sensible implementation. So any general algorithm for
 		    /// undirected graphs should compile with this class, but it will not
 		    /// run properly, of course.
 		    /// An actual graph implementation like \ref ListGraph or
 		    /// \ref SmartGraph may have additional functionality.
 		    ///
 		    /// The LEMON undirected graphs also fulfill the concept of
 		    /// directed graphs (\ref lemon::concepts::Digraph "Digraph
 		    /// Concept"). Each edges can be seen as two opposite
 		    /// directed arc and consequently the undirected graph can be
 		    /// seen as the direceted graph of these directed arcs. The
 		    /// Graph has the Edge inner class for the edges and
 		    /// the Arc type for the directed arcs. The Arc type is
 		    /// convertible to Edge or inherited from it so from a directed
-		    /// arc we can get the represented edge.
+		    /// The undirected graphs also fulfill the concept of \ref Digraph
 		    /// "directed graphs", since each edge can also be regarded as two
 		    /// oppositely directed arcs.
 		    /// Undirected graphs provide an Edge type for the undirected edges and
 		    /// an Arc type for the directed arcs. The Arc type is convertible to
 		    /// Edge or inherited from it, i.e. the corresponding edge can be
 		    /// obtained from an arc.
 		    /// EdgeIt and EdgeMap classes can be used for the edges, while ArcIt
 		    /// and ArcMap classes can be used for the arcs (just like in digraphs).
 		    /// Both InArcIt and OutArcIt iterates on the same edges but with
 		    /// opposite direction. IncEdgeIt also iterates on the same edges
 		    /// as OutArcIt and InArcIt, but it is not convertible to Arc,
 		    /// only to Edge.
 		    ///
 		    /// In the sense of the LEMON each edge has a default
 		    /// direction (it should be in every computer implementation,
 		    /// because the order of edge's nodes defines an
 		    /// orientation). With the default orientation we can define that
 		    /// the directed arc is forward or backward directed. With the \c
 		    /// direction() and \c direct() function we can get the direction
-		    /// of the directed arc and we can direct an edge.
+		    /// In LEMON, each undirected edge has an inherent orientation.
 		    /// Thus it can defined if an arc is forward or backward oriented in
 		    /// an undirected graph with respect to this default oriantation of
 		    /// the represented edge.
 		    /// With the direction() and direct() functions the direction
 		    /// of an arc can be obtained and set, respectively.
 		    ///
 		    /// The EdgeIt is an iterator for the edges. We can use
 		    /// the EdgeMap to map values for the edges. The InArcIt and
 		    /// OutArcIt iterates on the same edges but with opposite
 		    /// direction. The IncEdgeIt iterates also on the same edges
 		    /// as the OutArcIt and InArcIt but it is not convertible to Arc just
 		    /// to Edge.
 		    /// Only nodes and edges can be added to or removed from an undirected
 		    /// graph and the corresponding arcs are added or removed automatically.
 		    ///
 		    /// \sa Digraph
 		    class Graph {
 		    private:
 		      /// Graphs are \e not copy constructible. Use DigraphCopy instead.
 		      Graph(const Graph&) {}
 		      /// \brief Assignment of a graph to another one is \e not allowed.
 		      /// Use DigraphCopy instead.
 		      void operator=(const Graph&) {}
 		    public:
 		      /// \brief The undirected graph should be tagged by the
 		      /// UndirectedTag.
 		      /// Default constructor.
 		      Graph() {}
 		      /// \brief Undirected graphs should be tagged with \c UndirectedTag.
 		      ///
 		      /// The undirected graph should be tagged by the UndirectedTag. This
 		      /// tag helps the enable_if technics to make compile time
 		      /// Undirected graphs should be tagged with \c UndirectedTag.
 		      ///
 		      /// This tag helps the \c enable_if technics to make compile time
 		      /// specializations for undirected graphs.
 		      typedef True UndirectedTag;
 		      /// \brief The base type of node iterators,
 		      /// or in other words, the trivial node iterator.
 		      ///
 		      /// This is the base type of each node iterator,
 		      /// thus each kind of node iterator converts to this.
 		      /// More precisely each kind of node iterator should be inherited
-		      /// from the trivial node iterator.
+		      /// The node type of the graph
 		      /// This class identifies a node of the graph. It also serves
 		      /// as a base class of the node iterators,
 		      /// thus they convert to this type.
 		      class Node {
 		      public:
 		        /// Default constructor
 		        /// @warning The default constructor sets the iterator
 		        /// to an undefined value.
 		        /// Default constructor.
 		        /// \warning It sets the object to an undefined value.
 		        Node() { }
 		        /// Copy constructor.
 		        /// Copy constructor.
 		        ///
 		        Node(const Node&) { }
 		        /// Invalid constructor \& conversion.
+		        /// %Invalid constructor \& conversion.
-		        /// This constructor initializes the iterator to be invalid.
+		        /// Initializes the object to be invalid.
 		        /// \sa Invalid for more details.
 		        Node(Invalid) { }
 		        /// Equality operator
 		        /// Equality operator.
 		        ///
 		        /// Two iterators are equal if and only if they point to the
-		        /// same object or both are invalid.
+		        /// same object or both are \c INVALID.
 		        bool operator==(Node) const { return true; }
 		        /// Inequality operator
 		        /// \sa operator==(Node n)
 		        ///
 		        /// Inequality operator.
 		        bool operator!=(Node) const { return true; }
 		        /// Artificial ordering operator.
 		        /// To allow the use of graph descriptors as key type in std::map or
 		        /// similar associative container we require this.
 		        /// Artificial ordering operator.
 		        ///
-		        /// \note This operator only have to define some strict ordering of
+		        /// \note This operator only has to define some strict ordering of
 		        /// the items; this order has nothing to do with the iteration
 		        /// ordering of the items.
 		        bool operator<(Node) const { return false; }
 		      };
-		      /// This iterator goes through each node.
+		      /// Iterator class for the nodes.
 		      /// This iterator goes through each node.
+		      /// This iterator goes through each node of the graph.
 		      /// Its usage is quite simple, for example you can count the number
 		      /// of nodes in graph \c g of type \c Graph like this:
+		      /// of nodes in a graph \c g of type \c %Graph like this:
 		      ///\code
 		      /// int count=0;
 		      /// for (Graph::NodeIt n(g); n!=INVALID; ++n) ++count;
 		      ///\endcode
 		      class NodeIt : public Node {
 		      public:
 		        /// Default constructor
 		        /// @warning The default constructor sets the iterator
 		        /// to an undefined value.
 		        /// Default constructor.
 		        /// \warning It sets the iterator to an undefined value.
 		        NodeIt() { }
 		        /// Copy constructor.
 		        /// Copy constructor.
 		        ///
 		        NodeIt(const NodeIt& n) : Node(n) { }
 		        /// Invalid constructor \& conversion.
+		        /// %Invalid constructor \& conversion.
-		        /// Initialize the iterator to be invalid.
+		        /// Initializes the iterator to be invalid.
 		        /// \sa Invalid for more details.
 		        NodeIt(Invalid) { }
 		        /// Sets the iterator to the first node.
-		        /// Sets the iterator to the first node of \c g.
+		        /// Sets the iterator to the first node of the given digraph.
 		        ///
 		        NodeIt(const Graph&) { }
 		        /// Node -> NodeIt conversion.
 		        explicit NodeIt(const Graph&) { }
 		        /// Sets the iterator to the given node.
 		        /// Sets the iterator to the node of \c the graph pointed by
 		        /// the trivial iterator.
 		        /// This feature necessitates that each time we
 		        /// iterate the arc-set, the iteration order is the same.
 		        /// Sets the iterator to the given node of the given digraph.
 		        ///
 		        NodeIt(const Graph&, const Node&) { }
 		        /// Next node.
 		        /// Assign the iterator to the next node.
 		        ///
 		        NodeIt& operator++() { return *this; }
 		      };
-		      /// The base type of the edge iterators.
+		      /// The edge type of the graph
 		      /// The base type of the edge iterators.
 		      ///
 		      /// This class identifies an edge of the graph. It also serves
 		      /// as a base class of the edge iterators,
 		      /// thus they will convert to this type.
 		      class Edge {
 		      public:
 		        /// Default constructor
 		        /// @warning The default constructor sets the iterator
 		        /// to an undefined value.
 		        /// Default constructor.
 		        /// \warning It sets the object to an undefined value.
 		        Edge() { }
 		        /// Copy constructor.
 		        /// Copy constructor.
 		        ///
 		        Edge(const Edge&) { }
-		        /// Initialize the iterator to be invalid.
+		        /// %Invalid constructor \& conversion.
 		        /// Initialize the iterator to be invalid.
 		        ///
 		        /// Initializes the object to be invalid.
 		        /// \sa Invalid for more details.
 		        Edge(Invalid) { }
 		        /// Equality operator
 		        /// Equality operator.
 		        ///
 		        /// Two iterators are equal if and only if they point to the
-		        /// same object or both are invalid.
+		        /// same object or both are \c INVALID.
 		        bool operator==(Edge) const { return true; }
 		        /// Inequality operator
 		        /// \sa operator==(Edge n)
 		        ///
 		        /// Inequality operator.
 		        bool operator!=(Edge) const { return true; }
 		        /// Artificial ordering operator.
 		        /// To allow the use of graph descriptors as key type in std::map or
 		        /// similar associative container we require this.
 		        /// Artificial ordering operator.
 		        ///
 		        /// \note This operator only have to define some strict ordering of
 		        /// the items; this order has nothing to do with the iteration
-		        /// ordering of the items.
+		        /// \note This operator only has to define some strict ordering of
 		        /// the edges; this order has nothing to do with the iteration
 		        /// ordering of the edges.
 		        bool operator<(Edge) const { return false; }
 		      };
-		      /// This iterator goes through each edge.
+		      /// Iterator class for the edges.
-		      /// This iterator goes through each edge of a graph.
+		      /// This iterator goes through each edge of the graph.
 		      /// Its usage is quite simple, for example you can count the number
 		      /// of edges in a graph \c g of type \c Graph as follows:
+		      /// of edges in a graph \c g of type \c %Graph as follows:
 		      ///\code
 		      /// int count=0;
 		      /// for(Graph::EdgeIt e(g); e!=INVALID; ++e) ++count;
 		      ///\endcode
 		      class EdgeIt : public Edge {
 		      public:
 		        /// Default constructor
 		        /// @warning The default constructor sets the iterator
 		        /// to an undefined value.
 		        /// Default constructor.
 		        /// \warning It sets the iterator to an undefined value.
 		        EdgeIt() { }
 		        /// Copy constructor.
 		        /// Copy constructor.
 		        ///
 		        EdgeIt(const EdgeIt& e) : Edge(e) { }
-		        /// Initialize the iterator to be invalid.
+		        /// %Invalid constructor \& conversion.
-		        /// Initialize the iterator to be invalid.
+		        /// Initializes the iterator to be invalid.
 		        /// \sa Invalid for more details.
 		        EdgeIt(Invalid) { }
 		        /// Sets the iterator to the first edge.
 		        /// Sets the iterator to the first edge of the given graph.
 		        ///
 		        EdgeIt(Invalid) { }
 		        /// This constructor sets the iterator to the first edge.
 		        explicit EdgeIt(const Graph&) { }
 		        /// Sets the iterator to the given edge.
 		        /// This constructor sets the iterator to the first edge.
 		        EdgeIt(const Graph&) { }
 		        /// Edge -> EdgeIt conversion
 		        /// Sets the iterator to the value of the trivial iterator.
 		        /// This feature necessitates that each time we
 		        /// iterate the edge-set, the iteration order is the
 		        /// same.
 		        /// Sets the iterator to the given edge of the given graph.
 		        ///
 		        EdgeIt(const Graph&, const Edge&) { }
 		        /// Next edge
 		        /// Assign the iterator to the next edge.
 		        ///
 		        EdgeIt& operator++() { return *this; }
 		      };
 		      /// \brief This iterator goes trough the incident undirected
 		      /// arcs of a node.
 		      ///
 		      /// This iterator goes trough the incident edges
 		      /// of a certain node of a graph. You should assume that the
 		      /// loop arcs will be iterated twice.
 		      ///
+		      /// Iterator class for the incident edges of a node.
 		      /// This iterator goes trough the incident undirected edges
 		      /// of a certain node of a graph.
 		      /// Its usage is quite simple, for example you can compute the
 		      /// degree (i.e. count the number of incident arcs of a node \c n
 		      /// in graph \c g of type \c Graph as follows.
 		      /// degree (i.e. the number of incident edges) of a node \c n
 		      /// in a graph \c g of type \c %Graph as follows.
 		      ///
 		      ///\code
 		      /// int count=0;
 		      /// for(Graph::IncEdgeIt e(g, n); e!=INVALID; ++e) ++count;
 		      ///\endcode
 		      ///
 		      /// \warning Loop edges will be iterated twice.
 		      class IncEdgeIt : public Edge {
 		      public:
 		        /// Default constructor
 		        /// @warning The default constructor sets the iterator
 		        /// to an undefined value.
 		        /// Default constructor.
 		        /// \warning It sets the iterator to an undefined value.
 		        IncEdgeIt() { }
 		        /// Copy constructor.
 		        /// Copy constructor.
 		        ///
 		        IncEdgeIt(const IncEdgeIt& e) : Edge(e) { }
-		        /// Initialize the iterator to be invalid.
+		        /// %Invalid constructor \& conversion.
-		        /// Initialize the iterator to be invalid.
+		        /// Initializes the iterator to be invalid.
 		        /// \sa Invalid for more details.
 		        IncEdgeIt(Invalid) { }
 		        /// Sets the iterator to the first incident edge.
 		        /// Sets the iterator to the first incident edge of the given node.
 		        ///
 		        IncEdgeIt(Invalid) { }
 		        /// This constructor sets the iterator to first incident arc.
 		        IncEdgeIt(const Graph&, const Node&) { }
 		        /// Sets the iterator to the given edge.
 		        /// This constructor set the iterator to the first incident arc of
 		        /// the node.
 		        IncEdgeIt(const Graph&, const Node&) { }
 		        /// Edge -> IncEdgeIt conversion
 		        /// Sets the iterator to the given edge of the given graph.
 		        ///
 		        IncEdgeIt(const Graph&, const Edge&) { }
 		        /// Next incident edge
 		        /// Sets the iterator to the value of the trivial iterator \c e.
 		        /// This feature necessitates that each time we
 		        /// iterate the arc-set, the iteration order is the same.
 		        IncEdgeIt(const Graph&, const Edge&) { }
 		        /// Next incident arc
-		        /// Assign the iterator to the next incident arc
+		        /// Assign the iterator to the next incident edge
 		        /// of the corresponding node.
 		        IncEdgeIt& operator++() { return *this; }
 		      };
-		      /// The directed arc type.
+		      /// The arc type of the graph
 		      /// The directed arc type. It can be converted to the
 		      /// edge or it should be inherited from the undirected
-		      /// edge.
+		      /// This class identifies a directed arc of the graph. It also serves
 		      /// as a base class of the arc iterators,
 		      /// thus they will convert to this type.
 		      class Arc {
 		      public:
 		        /// Default constructor
 		        /// @warning The default constructor sets the iterator
 		        /// to an undefined value.
 		        /// Default constructor.
 		        /// \warning It sets the object to an undefined value.
 		        Arc() { }
 		        /// Copy constructor.
 		        /// Copy constructor.
 		        ///
 		        Arc(const Arc&) { }
-		        /// Initialize the iterator to be invalid.
+		        /// %Invalid constructor \& conversion.
 		        /// Initialize the iterator to be invalid.
 		        ///
 		        /// Initializes the object to be invalid.
 		        /// \sa Invalid for more details.
 		        Arc(Invalid) { }
 		        /// Equality operator
 		        /// Equality operator.
 		        ///
 		        /// Two iterators are equal if and only if they point to the
-		        /// same object or both are invalid.
+		        /// same object or both are \c INVALID.
 		        bool operator==(Arc) const { return true; }
 		        /// Inequality operator
 		        /// \sa operator==(Arc n)
 		        ///
 		        /// Inequality operator.
 		        bool operator!=(Arc) const { return true; }
 		        /// Artificial ordering operator.
 		        /// To allow the use of graph descriptors as key type in std::map or
 		        /// similar associative container we require this.
 		        /// Artificial ordering operator.
 		        ///
 		        /// \note This operator only have to define some strict ordering of
 		        /// the items; this order has nothing to do with the iteration
-		        /// ordering of the items.
+		        /// \note This operator only has to define some strict ordering of
 		        /// the arcs; this order has nothing to do with the iteration
 		        /// ordering of the arcs.
 		        bool operator<(Arc) const { return false; }
 		        /// Converison to Edge
+		        /// Converison to \c Edge
 		        /// Converison to \c Edge.
 		        ///
 		        operator Edge() const { return Edge(); }
 		      };
 		      /// This iterator goes through each directed arc.
-		      /// This iterator goes through each arc of a graph.
+		      /// Iterator class for the arcs.
 		      /// This iterator goes through each directed arc of the graph.
 		      /// Its usage is quite simple, for example you can count the number
 		      /// of arcs in a graph \c g of type \c Graph as follows:
+		      /// of arcs in a graph \c g of type \c %Graph as follows:
 		      ///\code
 		      /// int count=0;
-		      /// for(Graph::ArcIt e(g); e!=INVALID; ++e) ++count;
+		      /// for(Graph::ArcIt a(g); a!=INVALID; ++a) ++count;
 		      ///\endcode
 		      class ArcIt : public Arc {
 		      public:
 		        /// Default constructor
 		        /// @warning The default constructor sets the iterator
 		        /// to an undefined value.
 		        /// Default constructor.
 		        /// \warning It sets the iterator to an undefined value.
 		        ArcIt() { }
 		        /// Copy constructor.
 		        /// Copy constructor.
 		        ///
 		        ArcIt(const ArcIt& e) : Arc(e) { }
-		        /// Initialize the iterator to be invalid.
+		        /// %Invalid constructor \& conversion.
-		        /// Initialize the iterator to be invalid.
+		        /// Initializes the iterator to be invalid.
 		        /// \sa Invalid for more details.
 		        ArcIt(Invalid) { }
 		        /// Sets the iterator to the first arc.
 		        /// Sets the iterator to the first arc of the given graph.
 		        ///
 		        ArcIt(Invalid) { }
 		        /// This constructor sets the iterator to the first arc.
 		        explicit ArcIt(const Graph &g) { ignore_unused_variable_warning(g); }
 		        /// Sets the iterator to the given arc.
 		        /// This constructor sets the iterator to the first arc of \c g.
 		        ///@param g the graph
 		        ArcIt(const Graph &g) { ignore_unused_variable_warning(g); }
 		        /// Arc -> ArcIt conversion
 		        /// Sets the iterator to the value of the trivial iterator \c e.
 		        /// This feature necessitates that each time we
 		        /// iterate the arc-set, the iteration order is the same.
 		        /// Sets the iterator to the given arc of the given graph.
 		        ///
 		        ArcIt(const Graph&, const Arc&) { }
 		        ///Next arc
+		        /// Next arc
 		        /// Assign the iterator to the next arc.
 		        ///
 		        ArcIt& operator++() { return *this; }
 		      };
-		      /// This iterator goes trough the outgoing directed arcs of a node.
+		      /// Iterator class for the outgoing arcs of a node.
 		      /// This iterator goes trough the \e outgoing arcs of a certain node
 		      /// of a graph.
 		      /// This iterator goes trough the \e outgoing directed arcs of a
 		      /// certain node of a graph.
 		      /// Its usage is quite simple, for example you can count the number
 		      /// of outgoing arcs of a node \c n
 		      /// in graph \c g of type \c Graph as follows.
+		      /// in a graph \c g of type \c %Graph as follows.
 		      ///\code
 		      /// int count=0;
-		      /// for (Graph::OutArcIt e(g, n); e!=INVALID; ++e) ++count;
+		      /// for (Digraph::OutArcIt a(g, n); a!=INVALID; ++a) ++count;
 		      ///\endcode
 		      class OutArcIt : public Arc {
 		      public:
 		        /// Default constructor
 		        /// @warning The default constructor sets the iterator
 		        /// to an undefined value.
 		        /// Default constructor.
 		        /// \warning It sets the iterator to an undefined value.
 		        OutArcIt() { }
 		        /// Copy constructor.
 		        /// Copy constructor.
 		        ///
 		        OutArcIt(const OutArcIt& e) : Arc(e) { }
-		        /// Initialize the iterator to be invalid.
+		        /// %Invalid constructor \& conversion.
-		        /// Initialize the iterator to be invalid.
+		        /// Initializes the iterator to be invalid.
 		        /// \sa Invalid for more details.
 		        OutArcIt(Invalid) { }
 		        /// Sets the iterator to the first outgoing arc.
 		        /// Sets the iterator to the first outgoing arc of the given node.
 		        ///
 		        OutArcIt(Invalid) { }
 		        /// This constructor sets the iterator to the first outgoing arc.
 		        /// This constructor sets the iterator to the first outgoing arc of
 		        /// the node.
 		        ///@param n the node
 		        ///@param g the graph
 		        OutArcIt(const Graph& n, const Node& g) {
 		          ignore_unused_variable_warning(n);
 		          ignore_unused_variable_warning(g);
+		        }
-		        /// Arc -> OutArcIt conversion
+		        /// Sets the iterator to the given arc.
 		        /// Sets the iterator to the value of the trivial iterator.
 		        /// This feature necessitates that each time we
-		        /// iterate the arc-set, the iteration order is the same.
+		        /// Sets the iterator to the given arc of the given graph.
 		        ///
 		        OutArcIt(const Graph&, const Arc&) { }
 		        ///Next outgoing arc
+		        /// Next outgoing arc
 		        /// Assign the iterator to the next
 		        /// outgoing arc of the corresponding node.
 		        OutArcIt& operator++() { return *this; }
 		      };
-		      /// This iterator goes trough the incoming directed arcs of a node.
+		      /// Iterator class for the incoming arcs of a node.
 		      /// This iterator goes trough the \e incoming arcs of a certain node
 		      /// of a graph.
 		      /// This iterator goes trough the \e incoming directed arcs of a
 		      /// certain node of a graph.
 		      /// Its usage is quite simple, for example you can count the number
 		      /// of outgoing arcs of a node \c n
 		      /// in graph \c g of type \c Graph as follows.
 		      /// of incoming arcs of a node \c n
 		      /// in a graph \c g of type \c %Graph as follows.
 		      ///\code
 		      /// int count=0;
-		      /// for(Graph::InArcIt e(g, n); e!=INVALID; ++e) ++count;
+		      /// for (Digraph::InArcIt a(g, n); a!=INVALID; ++a) ++count;
 		      ///\endcode
 		      class InArcIt : public Arc {
 		      public:
 		        /// Default constructor
 		        /// @warning The default constructor sets the iterator
 		        /// to an undefined value.
 		        /// Default constructor.
 		        /// \warning It sets the iterator to an undefined value.
 		        InArcIt() { }
 		        /// Copy constructor.
 		        /// Copy constructor.
 		        ///
 		        InArcIt(const InArcIt& e) : Arc(e) { }
-		        /// Initialize the iterator to be invalid.
+		        /// %Invalid constructor \& conversion.
-		        /// Initialize the iterator to be invalid.
+		        /// Initializes the iterator to be invalid.
 		        /// \sa Invalid for more details.
 		        InArcIt(Invalid) { }
 		        /// Sets the iterator to the first incoming arc.
 		        /// Sets the iterator to the first incoming arc of the given node.
 		        ///
 		        InArcIt(Invalid) { }
 		        /// This constructor sets the iterator to first incoming arc.
 		        /// This constructor set the iterator to the first incoming arc of
 		        /// the node.
 		        ///@param n the node
 		        ///@param g the graph
 		        InArcIt(const Graph& g, const Node& n) {
 		          ignore_unused_variable_warning(n);
 		          ignore_unused_variable_warning(g);
+		        }
-		        /// Arc -> InArcIt conversion
+		        /// Sets the iterator to the given arc.
 		        /// Sets the iterator to the value of the trivial iterator \c e.
 		        /// This feature necessitates that each time we
-		        /// iterate the arc-set, the iteration order is the same.
+		        /// Sets the iterator to the given arc of the given graph.
 		        ///
 		        InArcIt(const Graph&, const Arc&) { }
 		        /// Next incoming arc
 		        /// Assign the iterator to the next inarc of the corresponding node.
 		        ///
 		        /// Assign the iterator to the next
 		        /// incoming arc of the corresponding node.
 		        InArcIt& operator++() { return *this; }
 		      };
-		      /// \brief Reference map of the nodes to type \c T.
+		      /// \brief Standard graph map type for the nodes.
 		      ///
-		      /// Reference map of the nodes to type \c T.
+		      /// Standard graph map type for the nodes.
 		      /// It conforms to the ReferenceMap concept.
 		      template<class T>
 		      class NodeMap : public ReferenceMap<Node, T, T&, const T&>
+		      {
 		      public:
 		        ///\e
 		        NodeMap(const Graph&) { }
-		        ///\e
+		        /// Constructor
 		        explicit NodeMap(const Graph&) { }
 		        /// Constructor with given initial value
 		        NodeMap(const Graph&, T) { }
 		      private:
 		        ///Copy constructor
 		        NodeMap(const NodeMap& nm) :
 		          ReferenceMap<Node, T, T&, const T&>(nm) { }
 		        ///Assignment operator
 		        template <typename CMap>
 		        NodeMap& operator=(const CMap&) {
 		          checkConcept<ReadMap<Node, T>, CMap>();
 		          return *this;
+		        }
 		      };
-		      /// \brief Reference map of the arcs to type \c T.
+		      /// \brief Standard graph map type for the arcs.
 		      ///
-		      /// Reference map of the arcs to type \c T.
+		      /// Standard graph map type for the arcs.
 		      /// It conforms to the ReferenceMap concept.
 		      template<class T>
 		      class ArcMap : public ReferenceMap<Arc, T, T&, const T&>
+		      {
 		      public:
 		        ///\e
 		        ArcMap(const Graph&) { }
-		        ///\e
+		        /// Constructor
 		        explicit ArcMap(const Graph&) { }
 		        /// Constructor with given initial value
 		        ArcMap(const Graph&, T) { }
 		      private:
 		        ///Copy constructor
 		        ArcMap(const ArcMap& em) :
 		          ReferenceMap<Arc, T, T&, const T&>(em) { }
 		        ///Assignment operator
 		        template <typename CMap>
 		        ArcMap& operator=(const CMap&) {
 		          checkConcept<ReadMap<Arc, T>, CMap>();
 		          return *this;
+		        }
 		      };
 		      /// Reference map of the edges to type \c T.
-		      /// Reference map of the edges to type \c T.
+		      /// \brief Standard graph map type for the edges.
 		      ///
 		      /// Standard graph map type for the edges.
 		      /// It conforms to the ReferenceMap concept.
 		      template<class T>
 		      class EdgeMap : public ReferenceMap<Edge, T, T&, const T&>
+		      {
 		      public:
 		        ///\e
 		        EdgeMap(const Graph&) { }
-		        ///\e
+		        /// Constructor
 		        explicit EdgeMap(const Graph&) { }
 		        /// Constructor with given initial value
 		        EdgeMap(const Graph&, T) { }
 		      private:
 		        ///Copy constructor
 		        EdgeMap(const EdgeMap& em) :
 		          ReferenceMap<Edge, T, T&, const T&>(em) {}
 		        ///Assignment operator
 		        template <typename CMap>
 		        EdgeMap& operator=(const CMap&) {
 		          checkConcept<ReadMap<Edge, T>, CMap>();
 		          return *this;
+		        }
 		      };
-		      /// \brief Direct the given edge.
+		      /// \brief The first node of the edge.
 		      ///
 		      /// Direct the given edge. The returned arc source
 		      /// will be the given node.
 		      Arc direct(const Edge&, const Node&) const {
 		        return INVALID;
+		      }
-		      /// \brief Direct the given edge.
+		      /// Returns the first node of the given edge.
 		      ///
 		      /// Direct the given edge. The returned arc
 		      /// represents the given edge and the direction comes
 		      /// from the bool parameter. The source of the edge and
 		      /// the directed arc is the same when the given bool is true.
 		      Arc direct(const Edge&, bool) const {
 		        return INVALID;
+		      }
 		      /// \brief Returns true if the arc has default orientation.
 		      ///
 		      /// Returns whether the given directed arc is same orientation as
 		      /// the corresponding edge's default orientation.
 		      bool direction(Arc) const { return true; }
 		      /// \brief Returns the opposite directed arc.
 		      ///
 		      /// Returns the opposite directed arc.
 		      Arc oppositeArc(Arc) const { return INVALID; }
 		      /// \brief Opposite node on an arc
 		      ///
 		      /// \return The opposite of the given node on the given edge.
 		      Node oppositeNode(Node, Edge) const { return INVALID; }
 		      /// \brief First node of the edge.
 		      ///
 		      /// \return The first node of the given edge.
 		      ///
 		      /// Naturally edges don't have direction and thus
 		      /// don't have source and target node. However we use \c u() and \c v()
 		      /// methods to query the two nodes of the arc. The direction of the
 		      /// arc which arises this way is called the inherent direction of the
 		      /// edge, and is used to define the "default" direction
 		      /// of the directed versions of the arcs.
 		      /// Edges don't have source and target nodes, however methods
 		      /// u() and v() are used to query the two end-nodes of an edge.
 		      /// The orientation of an edge that arises this way is called
 		      /// the inherent direction, it is used to define the default
 		      /// direction for the corresponding arcs.
 		      /// \sa v()
 		      /// \sa direction()
 		      Node u(Edge) const { return INVALID; }
-		      /// \brief Second node of the edge.
+		      /// \brief The second node of the edge.
 		      ///
-		      /// \return The second node of the given edge.
+		      /// Returns the second node of the given edge.
 		      ///
 		      /// Naturally edges don't have direction and thus
 		      /// don't have source and target node. However we use \c u() and \c v()
 		      /// methods to query the two nodes of the arc. The direction of the
 		      /// arc which arises this way is called the inherent direction of the
 		      /// edge, and is used to define the "default" direction
 		      /// of the directed versions of the arcs.
 		      /// Edges don't have source and target nodes, however methods
 		      /// u() and v() are used to query the two end-nodes of an edge.
 		      /// The orientation of an edge that arises this way is called
 		      /// the inherent direction, it is used to define the default
 		      /// direction for the corresponding arcs.
 		      /// \sa u()
 		      /// \sa direction()
 		      Node v(Edge) const { return INVALID; }
-		      /// \brief Source node of the directed arc.
+		      /// \brief The source node of the arc.
 		      ///
 		      /// Returns the source node of the given arc.
 		      Node source(Arc) const { return INVALID; }
-		      /// \brief Target node of the directed arc.
+		      /// \brief The target node of the arc.
 		      ///
 		      /// Returns the target node of the given arc.
 		      Node target(Arc) const { return INVALID; }
-		      /// \brief Returns the id of the node.
+		      /// \brief The ID of the node.
 		      ///
 		      /// Returns the ID of the given node.
 		      int id(Node) const { return -1; }
-		      /// \brief Returns the id of the edge.
+		      /// \brief The ID of the edge.
 		      ///
 		      /// Returns the ID of the given edge.
 		      int id(Edge) const { return -1; }
-		      /// \brief Returns the id of the arc.
+		      /// \brief The ID of the arc.
 		      ///
 		      /// Returns the ID of the given arc.
 		      int id(Arc) const { return -1; }
-		      /// \brief Returns the node with the given id.
+		      /// \brief The node with the given ID.
 		      ///
-		      /// \pre The argument should be a valid node id in the graph.
+		      /// Returns the node with the given ID.
 		      /// \pre The argument should be a valid node ID in the graph.
 		      Node nodeFromId(int) const { return INVALID; }
-		      /// \brief Returns the edge with the given id.
+		      /// \brief The edge with the given ID.
 		      ///
-		      /// \pre The argument should be a valid edge id in the graph.
+		      /// Returns the edge with the given ID.
 		      /// \pre The argument should be a valid edge ID in the graph.
 		      Edge edgeFromId(int) const { return INVALID; }
-		      /// \brief Returns the arc with the given id.
+		      /// \brief The arc with the given ID.
 		      ///
-		      /// \pre The argument should be a valid arc id in the graph.
+		      /// Returns the arc with the given ID.
 		      /// \pre The argument should be a valid arc ID in the graph.
 		      Arc arcFromId(int) const { return INVALID; }
-		      /// \brief Returns an upper bound on the node IDs.
+		      /// \brief An upper bound on the node IDs.
 		      ///
 		      /// Returns an upper bound on the node IDs.
 		      int maxNodeId() const { return -1; }
-		      /// \brief Returns an upper bound on the edge IDs.
+		      /// \brief An upper bound on the edge IDs.
 		      ///
 		      /// Returns an upper bound on the edge IDs.
 		      int maxEdgeId() const { return -1; }
-		      /// \brief Returns an upper bound on the arc IDs.
+		      /// \brief An upper bound on the arc IDs.
 		      ///
 		      /// Returns an upper bound on the arc IDs.
 		      int maxArcId() const { return -1; }
 		      /// \brief The direction of the arc.
 		      ///
 		      /// Returns \c true if the direction of the given arc is the same as
 		      /// the inherent orientation of the represented edge.
 		      bool direction(Arc) const { return true; }
 		      /// \brief Direct the edge.
 		      ///
 		      /// Direct the given edge. The returned arc
 		      /// represents the given edge and its direction comes
 		      /// from the bool parameter. If it is \c true, then the direction
 		      /// of the arc is the same as the inherent orientation of the edge.
 		      Arc direct(Edge, bool) const {
 		        return INVALID;
+		      }
 		      /// \brief Direct the edge.
 		      ///
 		      /// Direct the given edge. The returned arc represents the given
 		      /// edge and its source node is the given node.
 		      Arc direct(Edge, Node) const {
 		        return INVALID;
+		      }
 		      /// \brief The oppositely directed arc.
 		      ///
 		      /// Returns the oppositely directed arc representing the same edge.
 		      Arc oppositeArc(Arc) const { return INVALID; }
 		      /// \brief The opposite node on the edge.
 		      ///
 		      /// Returns the opposite node on the given edge.
 		      Node oppositeNode(Node, Edge) const { return INVALID; }
 		      void first(Node&) const {}
 		      void next(Node&) const {}
 		      void first(Edge&) const {}
 		      void next(Edge&) const {}
 		      void first(Arc&) const {}
 		      void next(Arc&) const {}
 		      void firstOut(Arc&, Node) const {}
 		      void nextOut(Arc&) const {}
 		      void firstIn(Arc&, Node) const {}
 		      void nextIn(Arc&) const {}
 		      void firstInc(Edge &, bool &, const Node &) const {}
 		      void nextInc(Edge &, bool &) const {}
 		      // The second parameter is dummy.
 		      Node fromId(int, Node) const { return INVALID; }
 		      // The second parameter is dummy.
 		      Edge fromId(int, Edge) const { return INVALID; }
 		      // The second parameter is dummy.
 		      Arc fromId(int, Arc) const { return INVALID; }
 		      // Dummy parameter.
 		      int maxId(Node) const { return -1; }
 		      // Dummy parameter.
 		      int maxId(Edge) const { return -1; }
 		      // Dummy parameter.
 		      int maxId(Arc) const { return -1; }
-		      /// \brief Base node of the iterator
+		      /// \brief The base node of the iterator.
 		      ///
 		      /// Returns the base node (the source in this case) of the iterator
 		      Node baseNode(OutArcIt e) const {
 		        return source(e);
+		      }
-		      /// \brief Running node of the iterator
+		      /// Returns the base node of the given incident edge iterator.
 		      Node baseNode(IncEdgeIt) const { return INVALID; }
 		      /// \brief The running node of the iterator.
 		      ///
 		      /// Returns the running node (the target in this case) of the
 		      /// iterator
 		      Node runningNode(OutArcIt e) const {
 		        return target(e);
+		      }
+		      /// Returns the running node of the given incident edge iterator.
 		      Node runningNode(IncEdgeIt) const { return INVALID; }
-		      /// \brief Base node of the iterator
+		      /// \brief The base node of the iterator.
 		      ///
 		      /// Returns the base node (the target in this case) of the iterator
 		      Node baseNode(InArcIt e) const {
 		        return target(e);
+		      }
-		      /// \brief Running node of the iterator
+		      /// Returns the base node of the given outgoing arc iterator
 		      /// (i.e. the source node of the corresponding arc).
 		      Node baseNode(OutArcIt) const { return INVALID; }
 		      /// \brief The running node of the iterator.
 		      ///
 		      /// Returns the running node (the source in this case) of the
 		      /// iterator
 		      Node runningNode(InArcIt e) const {
 		        return source(e);
+		      }
+		      /// Returns the running node of the given outgoing arc iterator
 		      /// (i.e. the target node of the corresponding arc).
 		      Node runningNode(OutArcIt) const { return INVALID; }
-		      /// \brief Base node of the iterator
+		      /// \brief The base node of the iterator.
 		      ///
 		      /// Returns the base node of the iterator
 		      Node baseNode(IncEdgeIt) const {
 		        return INVALID;
+		      }
 		      /// Returns the base node of the given incomming arc iterator
 		      /// (i.e. the target node of the corresponding arc).
 		      Node baseNode(InArcIt) const { return INVALID; }
-		      /// \brief Running node of the iterator
+		      /// \brief The running node of the iterator.
 		      ///
 		      /// Returns the running node of the iterator
 		      Node runningNode(IncEdgeIt) const {
 		        return INVALID;
+		      }
 		      /// Returns the running node of the given incomming arc iterator
 		      /// (i.e. the source node of the corresponding arc).
 		      Node runningNode(InArcIt) const { return INVALID; }
 		      template <typename _Graph>
 		      struct Constraints {
 		        void constraints() {
 		          checkConcept<BaseGraphComponent, _Graph>();
 		          checkConcept<IterableGraphComponent<>, _Graph>();
 		          checkConcept<IDableGraphComponent<>, _Graph>();
 		          checkConcept<MappableGraphComponent<>, _Graph>();
+		        }
 		      };
 		    };
+		  }
+		}
 		#endif

lemon/concepts/graph_components.h

Show inline comments

 		/* -*- mode: C++; indent-tabs-mode: nil; -*-
+		 *
 		 * This file is a part of LEMON, a generic C++ optimization library.
+		 *
 		 * Copyright (C) 2003-2009
 		 * Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
 		 * (Egervary Research Group on Combinatorial Optimization, EGRES).
+		 *
 		 * Permission to use, modify and distribute this software is granted
 		 * provided that this copyright notice appears in all copies. For
 		 * precise terms see the accompanying LICENSE file.
+		 *
 		 * This software is provided "AS IS" with no warranty of any kind,
 		 * express or implied, and with no claim as to its suitability for any
 		 * purpose.
+		 *
 		 */
 		///\ingroup graph_concepts
 		///\file
 		///\brief The concept of graph components.
 		#ifndef LEMON_CONCEPTS_GRAPH_COMPONENTS_H
 		#define LEMON_CONCEPTS_GRAPH_COMPONENTS_H
 		#include <lemon/core.h>
 		#include <lemon/concepts/maps.h>
 		#include <lemon/bits/alteration_notifier.h>
 		namespace lemon {
 		  namespace concepts {
 		    /// \brief Concept class for \c Node, \c Arc and \c Edge types.
 		    ///
 		    /// This class describes the concept of \c Node, \c Arc and \c Edge
 		    /// subtypes of digraph and graph types.
 		    ///
 		    /// \note This class is a template class so that we can use it to
 		    /// create graph skeleton classes. The reason for this is that \c Node
 		    /// and \c Arc (or \c Edge) types should \e not derive from the same
 		    /// base class. For \c Node you should instantiate it with character
 		    /// \c 'n', for \c Arc with \c 'a' and for \c Edge with \c 'e'.
 		#ifndef DOXYGEN
 		    template <char sel = '0'>
 		#endif
 		    class GraphItem {
 		    public:
 		      /// \brief Default constructor.
 		      ///
 		      /// Default constructor.
 		      /// \warning The default constructor is not required to set
 		      /// the item to some well-defined value. So you should consider it
 		      /// as uninitialized.
 		      GraphItem() {}
 		      /// \brief Copy constructor.
 		      ///
 		      /// Copy constructor.
 		      GraphItem(const GraphItem &) {}
 		      /// \brief Constructor for conversion from \c INVALID.
 		      ///
 		      /// Constructor for conversion from \c INVALID.
 		      /// It initializes the item to be invalid.
 		      /// \sa Invalid for more details.
 		      GraphItem(Invalid) {}
 		      /// \brief Assignment operator.
 		      ///
 		      /// Assignment operator for the item.
 		      GraphItem& operator=(const GraphItem&) { return *this; }
 		      /// \brief Assignment operator for INVALID.
 		      ///
 		      /// This operator makes the item invalid.
 		      GraphItem& operator=(Invalid) { return *this; }
 		      /// \brief Equality operator.
 		      ///
 		      /// Equality operator.
 		      bool operator==(const GraphItem&) const { return false; }
 		      /// \brief Inequality operator.
 		      ///
 		      /// Inequality operator.
 		      bool operator!=(const GraphItem&) const { return false; }
 		      /// \brief Ordering operator.
 		      ///
 		      /// This operator defines an ordering of the items.
 		      /// It makes possible to use graph item types as key types in
 		      /// associative containers (e.g. \c std::map).
 		      ///
-		      /// \note This operator only have to define some strict ordering of
+		      /// \note This operator only has to define some strict ordering of
 		      /// the items; this order has nothing to do with the iteration
 		      /// ordering of the items.
 		      bool operator<(const GraphItem&) const { return false; }
 		      template<typename _GraphItem>
 		      struct Constraints {
 		        void constraints() {
 		          _GraphItem i1;
 		          i1=INVALID;
 		          _GraphItem i2 = i1;
 		          _GraphItem i3 = INVALID;
 		          i1 = i2 = i3;
 		          bool b;
 		          b = (ia == ib) && (ia != ib);
 		          b = (ia == INVALID) && (ib != INVALID);
 		          b = (ia < ib);
+		        }
 		        const _GraphItem &ia;
 		        const _GraphItem &ib;
 		      };
 		    };
 		    /// \brief Base skeleton class for directed graphs.
 		    ///
 		    /// This class describes the base interface of directed graph types.
 		    /// All digraph %concepts have to conform to this class.
 		    /// It just provides types for nodes and arcs and functions
 		    /// to get the source and the target nodes of arcs.
 		    class BaseDigraphComponent {
 		    public:
 		      typedef BaseDigraphComponent Digraph;
 		      /// \brief Node class of the digraph.
 		      ///
 		      /// This class represents the nodes of the digraph.
 		      typedef GraphItem<'n'> Node;
 		      /// \brief Arc class of the digraph.
 		      ///
 		      /// This class represents the arcs of the digraph.
 		      typedef GraphItem<'a'> Arc;
 		      /// \brief Return the source node of an arc.
 		      ///
 		      /// This function returns the source node of an arc.
 		      Node source(const Arc&) const { return INVALID; }
 		      /// \brief Return the target node of an arc.
 		      ///
 		      /// This function returns the target node of an arc.
 		      Node target(const Arc&) const { return INVALID; }
 		      /// \brief Return the opposite node on the given arc.
 		      ///
 		      /// This function returns the opposite node on the given arc.
 		      Node oppositeNode(const Node&, const Arc&) const {
 		        return INVALID;
+		      }
 		      template <typename _Digraph>
 		      struct Constraints {
 		        typedef typename _Digraph::Node Node;
 		        typedef typename _Digraph::Arc Arc;
 		        void constraints() {
 		          checkConcept<GraphItem<'n'>, Node>();
 		          checkConcept<GraphItem<'a'>, Arc>();
+		          {
 		            Node n;
 		            Arc e(INVALID);
 		            n = digraph.source(e);
 		            n = digraph.target(e);
 		            n = digraph.oppositeNode(n, e);
+		          }
+		        }
 		        const _Digraph& digraph;
 		      };
 		    };
 		    /// \brief Base skeleton class for undirected graphs.
 		    ///
 		    /// This class describes the base interface of undirected graph types.
 		    /// All graph %concepts have to conform to this class.
 		    /// It extends the interface of \ref BaseDigraphComponent with an
 		    /// \c Edge type and functions to get the end nodes of edges,
 		    /// to convert from arcs to edges and to get both direction of edges.
 		    class BaseGraphComponent : public BaseDigraphComponent {
 		    public:
 		      typedef BaseGraphComponent Graph;
 		      typedef BaseDigraphComponent::Node Node;
 		      typedef BaseDigraphComponent::Arc Arc;
 		      /// \brief Undirected edge class of the graph.
 		      ///
 		      /// This class represents the undirected edges of the graph.
 		      /// Undirected graphs can be used as directed graphs, each edge is
 		      /// represented by two opposite directed arcs.
 		      class Edge : public GraphItem<'e'> {
 		        typedef GraphItem<'e'> Parent;
 		      public:
 		        /// \brief Default constructor.
 		        ///
 		        /// Default constructor.
 		        /// \warning The default constructor is not required to set
 		        /// the item to some well-defined value. So you should consider it
 		        /// as uninitialized.
 		        Edge() {}
 		        /// \brief Copy constructor.
 		        ///
 		        /// Copy constructor.
 		        Edge(const Edge &) : Parent() {}
 		        /// \brief Constructor for conversion from \c INVALID.
 		        ///
 		        /// Constructor for conversion from \c INVALID.
 		        /// It initializes the item to be invalid.
 		        /// \sa Invalid for more details.
 		        Edge(Invalid) {}
 		        /// \brief Constructor for conversion from an arc.
 		        ///
 		        /// Constructor for conversion from an arc.
 		        /// Besides the core graph item functionality each arc should
 		        /// be convertible to the represented edge.
 		        Edge(const Arc&) {}
 		     };
 		      /// \brief Return one end node of an edge.
 		      ///
 		      /// This function returns one end node of an edge.
 		      Node u(const Edge&) const { return INVALID; }
 		      /// \brief Return the other end node of an edge.
 		      ///
 		      /// This function returns the other end node of an edge.
 		      Node v(const Edge&) const { return INVALID; }
 		      /// \brief Return a directed arc related to an edge.
 		      ///
 		      /// This function returns a directed arc from its direction and the
 		      /// represented edge.
 		      Arc direct(const Edge&, bool) const { return INVALID; }
 		      /// \brief Return a directed arc related to an edge.
 		      ///
 		      /// This function returns a directed arc from its source node and the
 		      /// represented edge.
 		      Arc direct(const Edge&, const Node&) const { return INVALID; }
 		      /// \brief Return the direction of the arc.
 		      ///
 		      /// Returns the direction of the arc. Each arc represents an
 		      /// edge with a direction. It gives back the
 		      /// direction.
 		      bool direction(const Arc&) const { return true; }
 		      /// \brief Return the opposite arc.
 		      ///
 		      /// This function returns the opposite arc, i.e. the arc representing
 		      /// the same edge and has opposite direction.
 		      Arc oppositeArc(const Arc&) const { return INVALID; }
 		      template <typename _Graph>
 		      struct Constraints {
 		        typedef typename _Graph::Node Node;
 		        typedef typename _Graph::Arc Arc;
 		        typedef typename _Graph::Edge Edge;
 		        void constraints() {
 		          checkConcept<BaseDigraphComponent, _Graph>();
 		          checkConcept<GraphItem<'e'>, Edge>();
+		          {
 		            Node n;
 		            Edge ue(INVALID);
 		            Arc e;
 		            n = graph.u(ue);
 		            n = graph.v(ue);
 		            e = graph.direct(ue, true);
 		            e = graph.direct(ue, false);
 		            e = graph.direct(ue, n);
 		            e = graph.oppositeArc(e);
 		            ue = e;
 		            bool d = graph.direction(e);
 		            ignore_unused_variable_warning(d);
+		          }
+		        }
 		        const _Graph& graph;
 		      };
 		    };
 		    /// \brief Skeleton class for \e idable directed graphs.
 		    ///
 		    /// This class describes the interface of \e idable directed graphs.
 		    /// It extends \ref BaseDigraphComponent with the core ID functions.
 		    /// The ids of the items must be unique and immutable.
 		    /// This concept is part of the Digraph concept.
 		    template <typename BAS = BaseDigraphComponent>
 		    class IDableDigraphComponent : public BAS {
 		    public:
 		      typedef BAS Base;
 		      typedef typename Base::Node Node;
 		      typedef typename Base::Arc Arc;
 		      /// \brief Return a unique integer id for the given node.
 		      ///
 		      /// This function returns a unique integer id for the given node.
 		      int id(const Node&) const { return -1; }
 		      /// \brief Return the node by its unique id.
 		      ///
 		      /// This function returns the node by its unique id.
 		      /// If the digraph does not contain a node with the given id,
 		      /// then the result of the function is undefined.
 		      Node nodeFromId(int) const { return INVALID; }
 		      /// \brief Return a unique integer id for the given arc.
 		      ///
 		      /// This function returns a unique integer id for the given arc.
 		      int id(const Arc&) const { return -1; }
 		      /// \brief Return the arc by its unique id.
 		      ///
 		      /// This function returns the arc by its unique id.
 		      /// If the digraph does not contain an arc with the given id,
 		      /// then the result of the function is undefined.
 		      Arc arcFromId(int) const { return INVALID; }
 		      /// \brief Return an integer greater or equal to the maximum
 		      /// node id.
 		      ///
 		      /// This function returns an integer greater or equal to the
 		      /// maximum node id.
 		      int maxNodeId() const { return -1; }
 		      /// \brief Return an integer greater or equal to the maximum
 		      /// arc id.
 		      ///
 		      /// This function returns an integer greater or equal to the
 		      /// maximum arc id.
 		      int maxArcId() const { return -1; }
 		      template <typename _Digraph>
 		      struct Constraints {

lemon/cplex.cc

Show inline comments

 		/* -*- mode: C++; indent-tabs-mode: nil; -*-
+		 *
 		 * This file is a part of LEMON, a generic C++ optimization library.
+		 *
 		 * Copyright (C) 2003-2009
 		 * Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
 		 * (Egervary Research Group on Combinatorial Optimization, EGRES).
+		 *
 		 * Permission to use, modify and distribute this software is granted
 		 * provided that this copyright notice appears in all copies. For
 		 * precise terms see the accompanying LICENSE file.
+		 *
 		 * This software is provided "AS IS" with no warranty of any kind,
 		 * express or implied, and with no claim as to its suitability for any
 		 * purpose.
+		 *
 		 */
 		#include <iostream>
 		#include <vector>
 		#include <cstring>
 		#include <lemon/cplex.h>
 		extern "C" {
 		#include <ilcplex/cplex.h>
+		}
 		///\file
 		///\brief Implementation of the LEMON-CPLEX lp solver interface.
 		namespace lemon {
 		  CplexEnv::LicenseError::LicenseError(int status) {
 		    if (!CPXgeterrorstring(0, status, _message)) {
 		      std::strcpy(_message, "Cplex unknown error");
+		    }
+		  }
 		  CplexEnv::CplexEnv() {
 		    int status;
 		    _cnt = new int;
 		    _env = CPXopenCPLEX(&status);
 		    if (_env == 0) {
 		      delete _cnt;
 		      _cnt = 0;
 		      throw LicenseError(status);
+		    }
+		  }
 		  CplexEnv::CplexEnv(const CplexEnv& other) {
 		    _env = other._env;
 		    _cnt = other._cnt;
 		    ++(*_cnt);
+		  }
 		  CplexEnv& CplexEnv::operator=(const CplexEnv& other) {
 		    _env = other._env;
 		    _cnt = other._cnt;
 		    ++(*_cnt);
 		    return *this;
+		  }
 		  CplexEnv::~CplexEnv() {
 		    --(*_cnt);
 		    if (*_cnt == 0) {
 		      delete _cnt;
 		      CPXcloseCPLEX(&_env);
+		    }
+		  }
 		  CplexBase::CplexBase() : LpBase() {
 		    int status;
 		    _prob = CPXcreateprob(cplexEnv(), &status, "Cplex problem");
 		    messageLevel(MESSAGE_NOTHING);
+		  }
 		  CplexBase::CplexBase(const CplexEnv& env)
 		    : LpBase(), _env(env) {
 		    int status;
 		    _prob = CPXcreateprob(cplexEnv(), &status, "Cplex problem");
 		    messageLevel(MESSAGE_NOTHING);
+		  }
 		  CplexBase::CplexBase(const CplexBase& cplex)
 		    : LpBase() {
 		    int status;
 		    _prob = CPXcloneprob(cplexEnv(), cplex._prob, &status);
 		    rows = cplex.rows;
 		    cols = cplex.cols;
 		    messageLevel(MESSAGE_NOTHING);
+		  }
 		  CplexBase::~CplexBase() {
 		    CPXfreeprob(cplexEnv(),&_prob);
+		  }
 		  int CplexBase::_addCol() {
 		    int i = CPXgetnumcols(cplexEnv(), _prob);
 		    double lb = -INF, ub = INF;
 		    CPXnewcols(cplexEnv(), _prob, 1, 0, &lb, &ub, 0, 0);
 		    return i;
+		  }
 		  int CplexBase::_addRow() {
 		    int i = CPXgetnumrows(cplexEnv(), _prob);
 		    const double ub = INF;
 		    const char s = 'L';
 		    CPXnewrows(cplexEnv(), _prob, 1, &ub, &s, 0, 0);
 		    return i;
+		  }
 		  int CplexBase::_addRow(Value lb, ExprIterator b,
 		                         ExprIterator e, Value ub) {
 		    int i = CPXgetnumrows(cplexEnv(), _prob);
 		    if (lb == -INF) {
 		      const char s = 'L';
 		      CPXnewrows(cplexEnv(), _prob, 1, &ub, &s, 0, 0);
 		    } else if (ub == INF) {
 		      const char s = 'G';
 		      CPXnewrows(cplexEnv(), _prob, 1, &lb, &s, 0, 0);
 		    } else if (lb == ub){
 		      const char s = 'E';
 		      CPXnewrows(cplexEnv(), _prob, 1, &lb, &s, 0, 0);
 		    } else {
 		      const char s = 'R';
 		      double len = ub - lb;
 		      CPXnewrows(cplexEnv(), _prob, 1, &lb, &s, &len, 0);
+		    }
 		    std::vector<int> indices;
 		    std::vector<int> rowlist;
 		    std::vector<Value> values;
 		    for(ExprIterator it=b; it!=e; ++it) {
 		      indices.push_back(it->first);
 		      values.push_back(it->second);
 		      rowlist.push_back(i);
+		    }
 		    CPXchgcoeflist(cplexEnv(), _prob, values.size(),
 		                   &rowlist.front(), &indices.front(), &values.front());
 		    return i;
+		  }
 		  void CplexBase::_eraseCol(int i) {
 		    CPXdelcols(cplexEnv(), _prob, i, i);
+		  }
 		  void CplexBase::_eraseRow(int i) {
 		    CPXdelrows(cplexEnv(), _prob, i, i);
+		  }
 		  void CplexBase::_eraseColId(int i) {
 		    cols.eraseIndex(i);
 		    cols.shiftIndices(i);
+		  }
 		  void CplexBase::_eraseRowId(int i) {
 		    rows.eraseIndex(i);
 		    rows.shiftIndices(i);
+		  }
 		  void CplexBase::_getColName(int col, std::string &name) const {
 		    int size;
 		    CPXgetcolname(cplexEnv(), _prob, 0, 0, 0, &size, col, col);
 		    if (size == 0) {
 		      name.clear();
 		      return;
+		    }
 		    size *= -1;
 		    std::vector<char> buf(size);
 		    char *cname;
 		    int tmp;
 		    CPXgetcolname(cplexEnv(), _prob, &cname, &buf.front(), size,
 		                  &tmp, col, col);
 		    name = cname;
+		  }
 		  void CplexBase::_setColName(int col, const std::string &name) {
 		    char *cname;
 		    cname = const_cast<char*>(name.c_str());
 		    CPXchgcolname(cplexEnv(), _prob, 1, &col, &cname);
+		  }
 		  int CplexBase::_colByName(const std::string& name) const {
 		    int index;
 		    if (CPXgetcolindex(cplexEnv(), _prob,
 		                       const_cast<char*>(name.c_str()), &index) == 0) {
 		      return index;
+		    }
 		    return -1;
+		  }
 		  void CplexBase::_getRowName(int row, std::string &name) const {
 		    int size;
 		    CPXgetrowname(cplexEnv(), _prob, 0, 0, 0, &size, row, row);
 		    if (size == 0) {
 		      name.clear();
 		      return;
+		    }
 		    size *= -1;
 		    std::vector<char> buf(size);
 		    char *cname;
 		    int tmp;
 		    CPXgetrowname(cplexEnv(), _prob, &cname, &buf.front(), size,
 		                  &tmp, row, row);
 		    name = cname;
+		  }
 		  void CplexBase::_setRowName(int row, const std::string &name) {
 		    char *cname;
 		    cname = const_cast<char*>(name.c_str());
 		    CPXchgrowname(cplexEnv(), _prob, 1, &row, &cname);
+		  }
 		  int CplexBase::_rowByName(const std::string& name) const {
 		    int index;
 		    if (CPXgetrowindex(cplexEnv(), _prob,
 		                       const_cast<char*>(name.c_str()), &index) == 0) {
 		      return index;
+		    }
 		    return -1;
+		  }
 		  void CplexBase::_setRowCoeffs(int i, ExprIterator b,
 		                                      ExprIterator e)
+		  {
 		    std::vector<int> indices;
 		    std::vector<int> rowlist;
 		    std::vector<Value> values;
 		    for(ExprIterator it=b; it!=e; ++it) {
 		      indices.push_back(it->first);
 		      values.push_back(it->second);
 		      rowlist.push_back(i);
+		    }
 		    CPXchgcoeflist(cplexEnv(), _prob, values.size(),
 		                   &rowlist.front(), &indices.front(), &values.front());
+		  }
 		  void CplexBase::_getRowCoeffs(int i, InsertIterator b) const {
 		    int tmp1, tmp2, tmp3, length;
 		    CPXgetrows(cplexEnv(), _prob, &tmp1, &tmp2, 0, 0, 0, &length, i, i);
 		    length = -length;
 		    std::vector<int> indices(length);
 		    std::vector<double> values(length);
 		    CPXgetrows(cplexEnv(), _prob, &tmp1, &tmp2,
 		               &indices.front(), &values.front(),
 		               length, &tmp3, i, i);
 		    for (int i = 0; i < length; ++i) {
 		      *b = std::make_pair(indices[i], values[i]);
 		      ++b;
+		    }
+		  }
 		  void CplexBase::_setColCoeffs(int i, ExprIterator b, ExprIterator e) {
 		    std::vector<int> indices;
 		    std::vector<int> collist;
 		    std::vector<Value> values;
 		    for(ExprIterator it=b; it!=e; ++it) {
 		      indices.push_back(it->first);
 		      values.push_back(it->second);
 		      collist.push_back(i);
+		    }
 		    CPXchgcoeflist(cplexEnv(), _prob, values.size(),
 		                   &indices.front(), &collist.front(), &values.front());
+		  }
 		  void CplexBase::_getColCoeffs(int i, InsertIterator b) const {
 		    int tmp1, tmp2, tmp3, length;
 		    CPXgetcols(cplexEnv(), _prob, &tmp1, &tmp2, 0, 0, 0, &length, i, i);
 		    length = -length;
 		    std::vector<int> indices(length);
 		    std::vector<double> values(length);
 		    CPXgetcols(cplexEnv(), _prob, &tmp1, &tmp2,
 		               &indices.front(), &values.front(),
 		               length, &tmp3, i, i);
 		    for (int i = 0; i < length; ++i) {
 		      *b = std::make_pair(indices[i], values[i]);
 		      ++b;
+		    }
+		  }
 		  void CplexBase::_setCoeff(int row, int col, Value value) {
 		    CPXchgcoef(cplexEnv(), _prob, row, col, value);
+		  }
 		  CplexBase::Value CplexBase::_getCoeff(int row, int col) const {
 		    CplexBase::Value value;
 		    CPXgetcoef(cplexEnv(), _prob, row, col, &value);
 		    return value;
+		  }
 		  void CplexBase::_setColLowerBound(int i, Value value) {
 		    const char s = 'L';
 		    CPXchgbds(cplexEnv(), _prob, 1, &i, &s, &value);
+		  }
 		  CplexBase::Value CplexBase::_getColLowerBound(int i) const {
 		    CplexBase::Value res;
 		    CPXgetlb(cplexEnv(), _prob, &res, i, i);
 		    return res <= -CPX_INFBOUND ? -INF : res;
+		  }
 		  void CplexBase::_setColUpperBound(int i, Value value)
+		  {
 		    const char s = 'U';
 		    CPXchgbds(cplexEnv(), _prob, 1, &i, &s, &value);
+		  }
 		  CplexBase::Value CplexBase::_getColUpperBound(int i) const {
 		    CplexBase::Value res;
 		    CPXgetub(cplexEnv(), _prob, &res, i, i);
 		    return res >= CPX_INFBOUND ? INF : res;
+		  }
 		  CplexBase::Value CplexBase::_getRowLowerBound(int i) const {
 		    char s;
 		    CPXgetsense(cplexEnv(), _prob, &s, i, i);
 		    CplexBase::Value res;
 		    switch (s) {
 		    case 'G':
 		    case 'R':
 		    case 'E':
 		      CPXgetrhs(cplexEnv(), _prob, &res, i, i);
 		      return res <= -CPX_INFBOUND ? -INF : res;
 		    default:
 		      return -INF;
+		    }
+		  }
 		  CplexBase::Value CplexBase::_getRowUpperBound(int i) const {
 		    char s;
 		    CPXgetsense(cplexEnv(), _prob, &s, i, i);
 		    CplexBase::Value res;
 		    switch (s) {
 		    case 'L':
 		    case 'E':
 		      CPXgetrhs(cplexEnv(), _prob, &res, i, i);
 		      return res >= CPX_INFBOUND ? INF : res;
 		    case 'R':
 		      CPXgetrhs(cplexEnv(), _prob, &res, i, i);
+		      {
 		        double rng;
 		        CPXgetrngval(cplexEnv(), _prob, &rng, i, i);
 		        res += rng;
+		      }
 		      return res >= CPX_INFBOUND ? INF : res;
 		    default:
 		      return INF;
+		    }
+		  }
 		  //This is easier to implement
 		  void CplexBase::_set_row_bounds(int i, Value lb, Value ub) {
 		    if (lb == -INF) {
 		      const char s = 'L';
 		      CPXchgsense(cplexEnv(), _prob, 1, &i, &s);
 		      CPXchgrhs(cplexEnv(), _prob, 1, &i, &ub);
 		    } else if (ub == INF) {
 		      const char s = 'G';
 		      CPXchgsense(cplexEnv(), _prob, 1, &i, &s);
 		      CPXchgrhs(cplexEnv(), _prob, 1, &i, &lb);
 		    } else if (lb == ub){
 		      const char s = 'E';
 		      CPXchgsense(cplexEnv(), _prob, 1, &i, &s);
 		      CPXchgrhs(cplexEnv(), _prob, 1, &i, &lb);
 		    } else {
 		      const char s = 'R';
 		      CPXchgsense(cplexEnv(), _prob, 1, &i, &s);
 		      CPXchgrhs(cplexEnv(), _prob, 1, &i, &lb);
 		      double len = ub - lb;
 		      CPXchgrngval(cplexEnv(), _prob, 1, &i, &len);
+		    }
+		  }
 		  void CplexBase::_setRowLowerBound(int i, Value lb)
+		  {
 		    LEMON_ASSERT(lb != INF, "Invalid bound");
 		    _set_row_bounds(i, lb, CplexBase::_getRowUpperBound(i));
+		  }
 		  void CplexBase::_setRowUpperBound(int i, Value ub)
+		  {

lemon/cplex.h

Show inline comments

 		/* -*- mode: C++; indent-tabs-mode: nil; -*-
+		 *
 		 * This file is a part of LEMON, a generic C++ optimization library.
+		 *
 		 * Copyright (C) 2003-2009
 		 * Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
 		 * (Egervary Research Group on Combinatorial Optimization, EGRES).
+		 *
 		 * Permission to use, modify and distribute this software is granted
 		 * provided that this copyright notice appears in all copies. For
 		 * precise terms see the accompanying LICENSE file.
+		 *
 		 * This software is provided "AS IS" with no warranty of any kind,
 		 * express or implied, and with no claim as to its suitability for any
 		 * purpose.
+		 *
 		 */
 		#ifndef LEMON_CPLEX_H
 		#define LEMON_CPLEX_H
 		///\file
 		///\brief Header of the LEMON-CPLEX lp solver interface.
 		#include <lemon/lp_base.h>
 		struct cpxenv;
 		struct cpxlp;
 		namespace lemon {
 		  /// \brief Reference counted wrapper around cpxenv pointer
 		  ///
 		  /// The cplex uses environment object which is responsible for
 		  /// checking the proper license usage. This class provides a simple
 		  /// interface for share the environment object between different
 		  /// problems.
 		  class CplexEnv {
 		    friend class CplexBase;
 		  private:
 		    cpxenv* _env;
 		    mutable int* _cnt;
 		  public:
 		    /// \brief This exception is thrown when the license check is not
 		    /// sufficient
 		    class LicenseError : public Exception {
 		      friend class CplexEnv;
 		    private:
 		      LicenseError(int status);
 		      char _message[510];
 		    public:
 		      /// The short error message
 		      virtual const char* what() const throw() {
 		        return _message;
+		      }
 		    };
 		    /// Constructor
 		    CplexEnv();
 		    /// Shallow copy constructor
 		    CplexEnv(const CplexEnv&);
 		    /// Shallow assignement
 		    CplexEnv& operator=(const CplexEnv&);
 		    /// Destructor
 		    virtual ~CplexEnv();
 		  protected:
 		    cpxenv* cplexEnv() { return _env; }
 		    const cpxenv* cplexEnv() const { return _env; }
 		  };
 		  /// \brief Base interface for the CPLEX LP and MIP solver
 		  ///
 		  /// This class implements the common interface of the CPLEX LP and
 		  /// MIP solvers.
 		  /// \ingroup lp_group
 		  class CplexBase : virtual public LpBase {
 		  protected:
 		    CplexEnv _env;
 		    cpxlp* _prob;
 		    CplexBase();
 		    CplexBase(const CplexEnv&);
 		    CplexBase(const CplexBase &);
 		    virtual ~CplexBase();
 		    virtual int _addCol();
 		    virtual int _addRow();
 		    virtual int _addRow(Value l, ExprIterator b, ExprIterator e, Value u);
 		    virtual void _eraseCol(int i);
 		    virtual void _eraseRow(int i);
 		    virtual void _eraseColId(int i);
 		    virtual void _eraseRowId(int i);
 		    virtual void _getColName(int col, std::string& name) const;
 		    virtual void _setColName(int col, const std::string& name);
 		    virtual int _colByName(const std::string& name) const;
 		    virtual void _getRowName(int row, std::string& name) const;
 		    virtual void _setRowName(int row, const std::string& name);
 		    virtual int _rowByName(const std::string& name) const;
 		    virtual void _setRowCoeffs(int i, ExprIterator b, ExprIterator e);
 		    virtual void _getRowCoeffs(int i, InsertIterator b) const;
 		    virtual void _setColCoeffs(int i, ExprIterator b, ExprIterator e);
 		    virtual void _getColCoeffs(int i, InsertIterator b) const;
 		    virtual void _setCoeff(int row, int col, Value value);
 		    virtual Value _getCoeff(int row, int col) const;
 		    virtual void _setColLowerBound(int i, Value value);
 		    virtual Value _getColLowerBound(int i) const;
 		    virtual void _setColUpperBound(int i, Value value);
 		    virtual Value _getColUpperBound(int i) const;
 		  private:
 		    void _set_row_bounds(int i, Value lb, Value ub);
 		  protected:
 		    virtual void _setRowLowerBound(int i, Value value);
 		    virtual Value _getRowLowerBound(int i) const;
 		    virtual void _setRowUpperBound(int i, Value value);
 		    virtual Value _getRowUpperBound(int i) const;
 		    virtual void _setObjCoeffs(ExprIterator b, ExprIterator e);
 		    virtual void _getObjCoeffs(InsertIterator b) const;
 		    virtual void _setObjCoeff(int i, Value obj_coef);
 		    virtual Value _getObjCoeff(int i) const;
 		    virtual void _setSense(Sense sense);
 		    virtual Sense _getSense() const;
 		    virtual void _clear();
 		    virtual void _messageLevel(MessageLevel level);
 		    void _applyMessageLevel();
 		    bool _message_enabled;
 		  public:
 		    /// Returns the used \c CplexEnv instance
 		    const CplexEnv& env() const { return _env; }
 		    /// \brief Returns the const cpxenv pointer
 		    ///
 		    /// \note The cpxenv might be destructed with the solver.
 		    const cpxenv* cplexEnv() const { return _env.cplexEnv(); }
 		    /// \brief Returns the const cpxenv pointer
 		    ///
 		    /// \note The cpxenv might be destructed with the solver.
 		    cpxenv* cplexEnv() { return _env.cplexEnv(); }
 		    /// Returns the cplex problem object
 		    cpxlp* cplexLp() { return _prob; }
 		    /// Returns the cplex problem object
 		    const cpxlp* cplexLp() const { return _prob; }
 		  };
 		  /// \brief Interface for the CPLEX LP solver
 		  ///
 		  /// This class implements an interface for the CPLEX LP solver.
 		  ///\ingroup lp_group
 		  class CplexLp : public LpSolver, public CplexBase {
 		  public:
 		    /// \e
 		    CplexLp();
 		    /// \e
 		    CplexLp(const CplexEnv&);
 		    /// \e
 		    CplexLp(const CplexLp&);
 		    /// \e
 		    virtual ~CplexLp();
 		    /// \e
 		    virtual CplexLp* cloneSolver() const;
 		    /// \e
 		    virtual CplexLp* newSolver() const;
 		  private:
 		    // these values cannot retrieved element by element
 		    mutable std::vector<int> _col_status;
 		    mutable std::vector<int> _row_status;
 		    mutable std::vector<Value> _primal_ray;
 		    mutable std::vector<Value> _dual_ray;
 		    void _clear_temporals();
 		    SolveExitStatus convertStatus(int status);
 		  protected:
 		    virtual const char* _solverName() const;
 		    virtual SolveExitStatus _solve();
 		    virtual Value _getPrimal(int i) const;
 		    virtual Value _getDual(int i) const;
 		    virtual Value _getPrimalValue() const;
 		    virtual VarStatus _getColStatus(int i) const;
 		    virtual VarStatus _getRowStatus(int i) const;
 		    virtual Value _getPrimalRay(int i) const;
 		    virtual Value _getDualRay(int i) const;
 		    virtual ProblemType _getPrimalType() const;
 		    virtual ProblemType _getDualType() const;
 		  public:
 		    /// Solve with primal simplex method
 		    SolveExitStatus solvePrimal();
 		    /// Solve with dual simplex method
 		    SolveExitStatus solveDual();
 		    /// Solve with barrier method
 		    SolveExitStatus solveBarrier();
 		  };
 		  /// \brief Interface for the CPLEX MIP solver
 		  ///
 		  /// This class implements an interface for the CPLEX MIP solver.
 		  ///\ingroup lp_group
 		  class CplexMip : public MipSolver, public CplexBase {
 		  public:
 		    /// \e
 		    CplexMip();
 		    /// \e
 		    CplexMip(const CplexEnv&);
 		    /// \e
 		    CplexMip(const CplexMip&);
 		    /// \e
 		    virtual ~CplexMip();
 		    /// \e
 		    virtual CplexMip* cloneSolver() const;
 		    /// \e
 		    virtual CplexMip* newSolver() const;
 		  protected:
 		    virtual const char* _solverName() const;
 		    virtual ColTypes _getColType(int col) const;
 		    virtual void _setColType(int col, ColTypes col_type);
 		    virtual SolveExitStatus _solve();
 		    virtual ProblemType _getType() const;
 		    virtual Value _getSol(int i) const;
 		    virtual Value _getSolValue() const;
 		  };
 		} //END OF NAMESPACE LEMON
 		#endif //LEMON_CPLEX_H

lemon/edge_set.h

Show inline comments

@@ -614,803 +614,803 @@
+		    }
 		    static Arc direct(Edge edge, bool dir) {
 		      return Arc(edge.id * 2 + (dir ? 1 : 0));
+		    }
 		    int id(const Node& node) const { return _graph->id(node); }
 		    static int id(Arc e) { return e.id; }
 		    static int id(Edge e) { return e.id; }
 		    Node nodeFromId(int id) const { return _graph->nodeFromId(id); }
 		    static Arc arcFromId(int id) { return Arc(id);}
 		    static Edge edgeFromId(int id) { return Edge(id);}
 		    int maxNodeId() const { return _graph->maxNodeId(); };
 		    int maxEdgeId() const { return arcs.size() / 2 - 1; }
 		    int maxArcId() const { return arcs.size()-1; }
 		    Node source(Arc e) const { return arcs[e.id ^ 1].target; }
 		    Node target(Arc e) const { return arcs[e.id].target; }
 		    Node u(Edge e) const { return arcs[2 * e.id].target; }
 		    Node v(Edge e) const { return arcs[2 * e.id + 1].target; }
 		    typedef typename ItemSetTraits<GR, Node>::ItemNotifier NodeNotifier;
 		    NodeNotifier& notifier(Node) const {
 		      return _graph->notifier(Node());
+		    }
 		    template <typename V>
 		    class NodeMap : public GR::template NodeMap<V> {
 		      typedef typename GR::template NodeMap<V> Parent;
 		    public:
 		      explicit NodeMap(const ListEdgeSetBase<GR>& arcset)
 		        : Parent(*arcset._graph) {}
 		      NodeMap(const ListEdgeSetBase<GR>& arcset, const V& value)
 		        : Parent(*arcset._graph, value) {}
 		      NodeMap& operator=(const NodeMap& cmap) {
 		        return operator=<NodeMap>(cmap);
+		      }
 		      template <typename CMap>
 		      NodeMap& operator=(const CMap& cmap) {
 		        Parent::operator=(cmap);
 		        return *this;
+		      }
 		    };
 		  };
 		  /// \ingroup graphs
 		  ///
 		  /// \brief Graph using a node set of another digraph or graph and an
 		  /// own edge set.
 		  ///
 		  /// This structure can be used to establish another graph over a
 		  /// node set of an existing one. This class uses the same Node type
 		  /// as the underlying graph, and each valid node of the original
 		  /// graph is valid in this arc set, therefore the node objects of
 		  /// the original graph can be used directly with this class. The
 		  /// node handling functions (id handling, observing, and iterators)
 		  /// works equivalently as in the original graph.
 		  ///
 		  /// This implementation is based on doubly-linked lists, from each
 		  /// node the incident edges make up lists, therefore one edge can be
 		  /// erased in constant time. It also makes possible, that node can
 		  /// be removed from the underlying graph, in this case all edges
 		  /// incident to the given node is erased from the arc set.
 		  ///
 		  /// \param GR The type of the graph which shares its node set
 		  /// with this class. Its interface must conform to the
 		  /// \ref concepts::Digraph "Digraph" or \ref concepts::Graph "Graph"
 		  /// concept.
 		  ///
 		  /// This class fully conforms to the \ref concepts::Graph "Graph"
 		  /// concept.
 		  template <typename GR>
 		  class ListEdgeSet : public EdgeSetExtender<ListEdgeSetBase<GR> > {
 		    typedef EdgeSetExtender<ListEdgeSetBase<GR> > Parent;
 		  public:
 		    typedef typename Parent::Node Node;
 		    typedef typename Parent::Arc Arc;
 		    typedef typename Parent::Edge Edge;
 		    typedef typename Parent::NodesImplBase NodesImplBase;
 		    void eraseNode(const Node& node) {
 		      Arc arc;
 		      Parent::firstOut(arc, node);
 		      while (arc != INVALID ) {
 		        erase(arc);
 		        Parent::firstOut(arc, node);
+		      }
+		    }
 		    void clearNodes() {
 		      Parent::clear();
+		    }
 		    class NodesImpl : public NodesImplBase {
 		      typedef NodesImplBase Parent;
 		    public:
 		      NodesImpl(const GR& graph, ListEdgeSet& arcset)
 		        : Parent(graph), _arcset(arcset) {}
 		      virtual ~NodesImpl() {}
 		    protected:
 		      virtual void erase(const Node& node) {
 		        _arcset.eraseNode(node);
 		        Parent::erase(node);
+		      }
 		      virtual void erase(const std::vector<Node>& nodes) {
 		        for (int i = 0; i < int(nodes.size()); ++i) {
 		          _arcset.eraseNode(nodes[i]);
+		        }
 		        Parent::erase(nodes);
+		      }
 		      virtual void clear() {
 		        _arcset.clearNodes();
 		        Parent::clear();
+		      }
 		    private:
 		      ListEdgeSet& _arcset;
 		    };
 		    NodesImpl _nodes;
 		  public:
 		    /// \brief Constructor of the EdgeSet.
 		    ///
 		    /// Constructor of the EdgeSet.
 		    ListEdgeSet(const GR& graph) : _nodes(graph, *this) {
 		      Parent::initalize(graph, _nodes);
+		    }
 		    /// \brief Add a new edge to the graph.
 		    ///
 		    /// Add a new edge to the graph with node \c u
 		    /// and node \c v endpoints.
 		    /// \return The new edge.
 		    Edge addEdge(const Node& u, const Node& v) {
 		      return Parent::addEdge(u, v);
+		    }
 		    /// \brief Erase an edge from the graph.
 		    ///
 		    /// Erase the edge \c e from the graph.
 		    void erase(const Edge& e) {
 		      return Parent::erase(e);
+		    }
 		  };
 		  template <typename GR>
 		  class SmartArcSetBase {
 		  public:
 		    typedef typename GR::Node Node;
 		    typedef typename GR::NodeIt NodeIt;
 		  protected:
 		    struct NodeT {
 		      int first_out, first_in;
 		      NodeT() : first_out(-1), first_in(-1) {}
 		    };
 		    typedef typename ItemSetTraits<GR, Node>::
 		    template Map<NodeT>::Type NodesImplBase;
 		    NodesImplBase* _nodes;
 		    struct ArcT {
 		      Node source, target;
 		      int next_out, next_in;
 		      ArcT() {}
 		    };
 		    std::vector<ArcT> arcs;
 		    const GR* _graph;
 		    void initalize(const GR& graph, NodesImplBase& nodes) {
 		      _graph = &graph;
 		      _nodes = &nodes;
+		    }
 		  public:
 		    class Arc {
 		      friend class SmartArcSetBase<GR>;
 		    protected:
 		      Arc(int _id) : id(_id) {}
 		      int id;
 		    public:
 		      Arc() {}
 		      Arc(Invalid) : id(-1) {}
 		      bool operator==(const Arc& arc) const { return id == arc.id; }
 		      bool operator!=(const Arc& arc) const { return id != arc.id; }
 		      bool operator<(const Arc& arc) const { return id < arc.id; }
 		    };
 		    SmartArcSetBase() {}
 		    Node addNode() {
 		      LEMON_ASSERT(false,
 		        "This graph structure does not support node insertion");
 		      return INVALID; // avoid warning
+		    }
 		    Arc addArc(const Node& u, const Node& v) {
 		      int n = arcs.size();
 		      arcs.push_back(ArcT());
 		      arcs[n].next_in = (*_nodes)[v].first_in;
 		      (*_nodes)[v].first_in = n;
 		      arcs[n].next_out = (*_nodes)[u].first_out;
 		      (*_nodes)[u].first_out = n;
 		      arcs[n].source = u;
 		      arcs[n].target = v;
 		      return Arc(n);
+		    }
 		    void clear() {
 		      Node node;
 		      for (first(node); node != INVALID; next(node)) {
 		        (*_nodes)[node].first_in = -1;
 		        (*_nodes)[node].first_out = -1;
+		      }
 		      arcs.clear();
+		    }
 		    void first(Node& node) const {
 		      _graph->first(node);
+		    }
 		    void next(Node& node) const {
 		      _graph->next(node);
+		    }
 		    void first(Arc& arc) const {
 		      arc.id = arcs.size() - 1;
+		    }
-		    void next(Arc& arc) const {
+		    static void next(Arc& arc) {
 		      --arc.id;
+		    }
 		    void firstOut(Arc& arc, const Node& node) const {
 		      arc.id = (*_nodes)[node].first_out;
+		    }
 		    void nextOut(Arc& arc) const {
 		      arc.id = arcs[arc.id].next_out;
+		    }
 		    void firstIn(Arc& arc, const Node& node) const {
 		      arc.id = (*_nodes)[node].first_in;
+		    }
 		    void nextIn(Arc& arc) const {
 		      arc.id = arcs[arc.id].next_in;
+		    }
 		    int id(const Node& node) const { return _graph->id(node); }
 		    int id(const Arc& arc) const { return arc.id; }
 		    Node nodeFromId(int ix) const { return _graph->nodeFromId(ix); }
 		    Arc arcFromId(int ix) const { return Arc(ix); }
 		    int maxNodeId() const { return _graph->maxNodeId(); };
 		    int maxArcId() const { return arcs.size() - 1; }
 		    Node source(const Arc& arc) const { return arcs[arc.id].source;}
 		    Node target(const Arc& arc) const { return arcs[arc.id].target;}
 		    typedef typename ItemSetTraits<GR, Node>::ItemNotifier NodeNotifier;
 		    NodeNotifier& notifier(Node) const {
 		      return _graph->notifier(Node());
+		    }
 		    template <typename V>
 		    class NodeMap : public GR::template NodeMap<V> {
 		      typedef typename GR::template NodeMap<V> Parent;
 		    public:
 		      explicit NodeMap(const SmartArcSetBase<GR>& arcset)
 		        : Parent(*arcset._graph) { }
 		      NodeMap(const SmartArcSetBase<GR>& arcset, const V& value)
 		        : Parent(*arcset._graph, value) { }
 		      NodeMap& operator=(const NodeMap& cmap) {
 		        return operator=<NodeMap>(cmap);
+		      }
 		      template <typename CMap>
 		      NodeMap& operator=(const CMap& cmap) {
 		        Parent::operator=(cmap);
 		        return *this;
+		      }
 		    };
 		  };
 		  /// \ingroup graphs
 		  ///
 		  /// \brief Digraph using a node set of another digraph or graph and
 		  /// an own arc set.
 		  ///
 		  /// This structure can be used to establish another directed graph
 		  /// over a node set of an existing one. This class uses the same
 		  /// Node type as the underlying graph, and each valid node of the
 		  /// original graph is valid in this arc set, therefore the node
 		  /// objects of the original graph can be used directly with this
 		  /// class. The node handling functions (id handling, observing, and
 		  /// iterators) works equivalently as in the original graph.
 		  ///
 		  /// \param GR The type of the graph which shares its node set with
 		  /// this class. Its interface must conform to the
 		  /// \ref concepts::Digraph "Digraph" or \ref concepts::Graph "Graph"
 		  /// concept.
 		  ///
 		  /// This implementation is slightly faster than the \c ListArcSet,
 		  /// because it uses continuous storage for arcs and it uses just
 		  /// single-linked lists for enumerate outgoing and incoming
 		  /// arcs. Therefore the arcs cannot be erased from the arc sets.
 		  ///
 		  /// \warning If a node is erased from the underlying graph and this
 		  /// node is the source or target of one arc in the arc set, then
 		  /// the arc set is invalidated, and it cannot be used anymore. The
 		  /// validity can be checked with the \c valid() member function.
 		  ///
 		  /// This class fully conforms to the \ref concepts::Digraph
 		  /// "Digraph" concept.
 		  template <typename GR>
 		  class SmartArcSet : public ArcSetExtender<SmartArcSetBase<GR> > {
 		    typedef ArcSetExtender<SmartArcSetBase<GR> > Parent;
 		  public:
 		    typedef typename Parent::Node Node;
 		    typedef typename Parent::Arc Arc;
 		  protected:
 		    typedef typename Parent::NodesImplBase NodesImplBase;
 		    void eraseNode(const Node& node) {
 		      if (typename Parent::InArcIt(*this, node) == INVALID &&
 		          typename Parent::OutArcIt(*this, node) == INVALID) {
 		        return;
+		      }
 		      throw typename NodesImplBase::Notifier::ImmediateDetach();
+		    }
 		    void clearNodes() {
 		      Parent::clear();
+		    }
 		    class NodesImpl : public NodesImplBase {
 		      typedef NodesImplBase Parent;
 		    public:
 		      NodesImpl(const GR& graph, SmartArcSet& arcset)
 		        : Parent(graph), _arcset(arcset) {}
 		      virtual ~NodesImpl() {}
 		      bool attached() const {
 		        return Parent::attached();
+		      }
 		    protected:
 		      virtual void erase(const Node& node) {
 		        try {
 		          _arcset.eraseNode(node);
 		          Parent::erase(node);
 		        } catch (const typename NodesImplBase::Notifier::ImmediateDetach&) {
 		          Parent::clear();
 		          throw;
+		        }
+		      }
 		      virtual void erase(const std::vector<Node>& nodes) {
 		        try {
 		          for (int i = 0; i < int(nodes.size()); ++i) {
 		            _arcset.eraseNode(nodes[i]);
+		          }
 		          Parent::erase(nodes);
 		        } catch (const typename NodesImplBase::Notifier::ImmediateDetach&) {
 		          Parent::clear();
 		          throw;
+		        }
+		      }
 		      virtual void clear() {
 		        _arcset.clearNodes();
 		        Parent::clear();
+		      }
 		    private:
 		      SmartArcSet& _arcset;
 		    };
 		    NodesImpl _nodes;
 		  public:
 		    /// \brief Constructor of the ArcSet.
 		    ///
 		    /// Constructor of the ArcSet.
 		    SmartArcSet(const GR& graph) : _nodes(graph, *this) {
 		      Parent::initalize(graph, _nodes);
+		    }
 		    /// \brief Add a new arc to the digraph.
 		    ///
 		    /// Add a new arc to the digraph with source node \c s
 		    /// and target node \c t.
 		    /// \return The new arc.
 		    Arc addArc(const Node& s, const Node& t) {
 		      return Parent::addArc(s, t);
+		    }
 		    /// \brief Validity check
 		    ///
 		    /// This functions gives back false if the ArcSet is
 		    /// invalidated. It occurs when a node in the underlying graph is
 		    /// erased and it is not isolated in the ArcSet.
 		    bool valid() const {
 		      return _nodes.attached();
+		    }
 		  };
 		  template <typename GR>
 		  class SmartEdgeSetBase {
 		  public:
 		    typedef typename GR::Node Node;
 		    typedef typename GR::NodeIt NodeIt;
 		  protected:
 		    struct NodeT {
 		      int first_out;
 		      NodeT() : first_out(-1) {}
 		    };
 		    typedef typename ItemSetTraits<GR, Node>::
 		    template Map<NodeT>::Type NodesImplBase;
 		    NodesImplBase* _nodes;
 		    struct ArcT {
 		      Node target;
 		      int next_out;
 		      ArcT() {}
 		    };
 		    std::vector<ArcT> arcs;
 		    const GR* _graph;
 		    void initalize(const GR& graph, NodesImplBase& nodes) {
 		      _graph = &graph;
 		      _nodes = &nodes;
+		    }
 		  public:
 		    class Edge {
 		      friend class SmartEdgeSetBase;
 		    protected:
 		      int id;
 		      explicit Edge(int _id) { id = _id;}
 		    public:
 		      Edge() {}
 		      Edge (Invalid) { id = -1; }
 		      bool operator==(const Edge& arc) const {return id == arc.id;}
 		      bool operator!=(const Edge& arc) const {return id != arc.id;}
 		      bool operator<(const Edge& arc) const {return id < arc.id;}
 		    };
 		    class Arc {
 		      friend class SmartEdgeSetBase;
 		    protected:
 		      Arc(int _id) : id(_id) {}
 		      int id;
 		    public:
 		      operator Edge() const { return edgeFromId(id / 2); }
 		      Arc() {}
 		      Arc(Invalid) : id(-1) {}
 		      bool operator==(const Arc& arc) const { return id == arc.id; }
 		      bool operator!=(const Arc& arc) const { return id != arc.id; }
 		      bool operator<(const Arc& arc) const { return id < arc.id; }
 		    };
 		    SmartEdgeSetBase() {}
 		    Node addNode() {
 		      LEMON_ASSERT(false,
 		        "This graph structure does not support node insertion");
 		      return INVALID; // avoid warning
+		    }
 		    Edge addEdge(const Node& u, const Node& v) {
 		      int n = arcs.size();
 		      arcs.push_back(ArcT());
 		      arcs.push_back(ArcT());
 		      arcs[n].target = u;
 		      arcs[n | 1].target = v;
 		      arcs[n].next_out = (*_nodes)[v].first_out;
 		      (*_nodes)[v].first_out = n;
 		      arcs[n | 1].next_out = (*_nodes)[u].first_out;
 		      (*_nodes)[u].first_out = (n | 1);
 		      return Edge(n / 2);
+		    }
 		    void clear() {
 		      Node node;
 		      for (first(node); node != INVALID; next(node)) {
 		        (*_nodes)[node].first_out = -1;
+		      }
 		      arcs.clear();
+		    }
 		    void first(Node& node) const {
 		      _graph->first(node);
+		    }
 		    void next(Node& node) const {
 		      _graph->next(node);
+		    }
 		    void first(Arc& arc) const {
 		      arc.id = arcs.size() - 1;
+		    }
-		    void next(Arc& arc) const {
+		    static void next(Arc& arc) {
 		      --arc.id;
+		    }
 		    void first(Edge& arc) const {
 		      arc.id = arcs.size() / 2 - 1;
+		    }
-		    void next(Edge& arc) const {
+		    static void next(Edge& arc) {
 		      --arc.id;
+		    }
 		    void firstOut(Arc& arc, const Node& node) const {
 		      arc.id = (*_nodes)[node].first_out;
+		    }
 		    void nextOut(Arc& arc) const {
 		      arc.id = arcs[arc.id].next_out;
+		    }
 		    void firstIn(Arc& arc, const Node& node) const {
 		      arc.id = (((*_nodes)[node].first_out) ^ 1);
 		      if (arc.id == -2) arc.id = -1;
+		    }
 		    void nextIn(Arc& arc) const {
 		      arc.id = ((arcs[arc.id ^ 1].next_out) ^ 1);
 		      if (arc.id == -2) arc.id = -1;
+		    }
 		    void firstInc(Edge &arc, bool& dir, const Node& node) const {
 		      int de = (*_nodes)[node].first_out;
 		      if (de != -1 ) {
 		        arc.id = de / 2;
 		        dir = ((de & 1) == 1);
 		      } else {
 		        arc.id = -1;
 		        dir = true;
+		      }
+		    }
 		    void nextInc(Edge &arc, bool& dir) const {
 		      int de = (arcs[(arc.id * 2) | (dir ? 1 : 0)].next_out);
 		      if (de != -1 ) {
 		        arc.id = de / 2;
 		        dir = ((de & 1) == 1);
 		      } else {
 		        arc.id = -1;
 		        dir = true;
+		      }
+		    }
 		    static bool direction(Arc arc) {
 		      return (arc.id & 1) == 1;
+		    }
 		    static Arc direct(Edge edge, bool dir) {
 		      return Arc(edge.id * 2 + (dir ? 1 : 0));
+		    }
 		    int id(Node node) const { return _graph->id(node); }
 		    static int id(Arc arc) { return arc.id; }
 		    static int id(Edge arc) { return arc.id; }
 		    Node nodeFromId(int id) const { return _graph->nodeFromId(id); }
 		    static Arc arcFromId(int id) { return Arc(id); }
 		    static Edge edgeFromId(int id) { return Edge(id);}
 		    int maxNodeId() const { return _graph->maxNodeId(); };
 		    int maxArcId() const { return arcs.size() - 1; }
 		    int maxEdgeId() const { return arcs.size() / 2 - 1; }
 		    Node source(Arc e) const { return arcs[e.id ^ 1].target; }
 		    Node target(Arc e) const { return arcs[e.id].target; }
 		    Node u(Edge e) const { return arcs[2 * e.id].target; }
 		    Node v(Edge e) const { return arcs[2 * e.id + 1].target; }
 		    typedef typename ItemSetTraits<GR, Node>::ItemNotifier NodeNotifier;
 		    NodeNotifier& notifier(Node) const {
 		      return _graph->notifier(Node());
+		    }
 		    template <typename V>
 		    class NodeMap : public GR::template NodeMap<V> {
 		      typedef typename GR::template NodeMap<V> Parent;
 		    public:
 		      explicit NodeMap(const SmartEdgeSetBase<GR>& arcset)
 		        : Parent(*arcset._graph) { }
 		      NodeMap(const SmartEdgeSetBase<GR>& arcset, const V& value)
 		        : Parent(*arcset._graph, value) { }
 		      NodeMap& operator=(const NodeMap& cmap) {
 		        return operator=<NodeMap>(cmap);
+		      }
 		      template <typename CMap>
 		      NodeMap& operator=(const CMap& cmap) {
 		        Parent::operator=(cmap);
 		        return *this;
+		      }
 		    };
 		  };
 		  /// \ingroup graphs
 		  ///
 		  /// \brief Graph using a node set of another digraph or graph and an
 		  /// own edge set.
 		  ///
 		  /// This structure can be used to establish another graph over a
 		  /// node set of an existing one. This class uses the same Node type
 		  /// as the underlying graph, and each valid node of the original
 		  /// graph is valid in this arc set, therefore the node objects of
 		  /// the original graph can be used directly with this class. The
 		  /// node handling functions (id handling, observing, and iterators)
 		  /// works equivalently as in the original graph.
 		  ///
 		  /// \param GR The type of the graph which shares its node set
 		  /// with this class. Its interface must conform to the
 		  /// \ref concepts::Digraph "Digraph" or \ref concepts::Graph "Graph"
 		  ///  concept.
 		  ///
 		  /// This implementation is slightly faster than the \c ListEdgeSet,
 		  /// because it uses continuous storage for edges and it uses just
 		  /// single-linked lists for enumerate incident edges. Therefore the
 		  /// edges cannot be erased from the edge sets.
 		  ///
 		  /// \warning If a node is erased from the underlying graph and this
 		  /// node is incident to one edge in the edge set, then the edge set
 		  /// is invalidated, and it cannot be used anymore. The validity can
 		  /// be checked with the \c valid() member function.
 		  ///
 		  /// This class fully conforms to the \ref concepts::Graph
 		  /// "Graph" concept.
 		  template <typename GR>
 		  class SmartEdgeSet : public EdgeSetExtender<SmartEdgeSetBase<GR> > {
 		    typedef EdgeSetExtender<SmartEdgeSetBase<GR> > Parent;
 		  public:
 		    typedef typename Parent::Node Node;
 		    typedef typename Parent::Arc Arc;
 		    typedef typename Parent::Edge Edge;
 		  protected:
 		    typedef typename Parent::NodesImplBase NodesImplBase;
 		    void eraseNode(const Node& node) {
 		      if (typename Parent::IncEdgeIt(*this, node) == INVALID) {
 		        return;
+		      }
 		      throw typename NodesImplBase::Notifier::ImmediateDetach();
+		    }
 		    void clearNodes() {
 		      Parent::clear();
+		    }
 		    class NodesImpl : public NodesImplBase {
 		      typedef NodesImplBase Parent;
 		    public:
 		      NodesImpl(const GR& graph, SmartEdgeSet& arcset)
 		        : Parent(graph), _arcset(arcset) {}
 		      virtual ~NodesImpl() {}
 		      bool attached() const {
 		        return Parent::attached();
+		      }
 		    protected:
 		      virtual void erase(const Node& node) {
 		        try {
 		          _arcset.eraseNode(node);
 		          Parent::erase(node);
 		        } catch (const typename NodesImplBase::Notifier::ImmediateDetach&) {
 		          Parent::clear();
 		          throw;
+		        }
+		      }
 		      virtual void erase(const std::vector<Node>& nodes) {
 		        try {
 		          for (int i = 0; i < int(nodes.size()); ++i) {
 		            _arcset.eraseNode(nodes[i]);
+		          }
 		          Parent::erase(nodes);
 		        } catch (const typename NodesImplBase::Notifier::ImmediateDetach&) {
 		          Parent::clear();
 		          throw;
+		        }
+		      }
 		      virtual void clear() {
 		        _arcset.clearNodes();
 		        Parent::clear();
+		      }
 		    private:
 		      SmartEdgeSet& _arcset;
 		    };
 		    NodesImpl _nodes;
 		  public:
 		    /// \brief Constructor of the EdgeSet.
 		    ///
 		    /// Constructor of the EdgeSet.
 		    SmartEdgeSet(const GR& graph) : _nodes(graph, *this) {
 		      Parent::initalize(graph, _nodes);
+		    }
 		    /// \brief Add a new edge to the graph.
 		    ///
 		    /// Add a new edge to the graph with node \c u
 		    /// and node \c v endpoints.
 		    /// \return The new edge.
 		    Edge addEdge(const Node& u, const Node& v) {
 		      return Parent::addEdge(u, v);
+		    }
 		    /// \brief Validity check
 		    ///
 		    /// This functions gives back false if the EdgeSet is
 		    /// invalidated. It occurs when a node in the underlying graph is
 		    /// erased and it is not isolated in the EdgeSet.
 		    bool valid() const {
 		      return _nodes.attached();
+		    }
 		  };
+		}
 		#endif

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1	1	/* -- mode: C++; indent-tabs-mode: nil; --
2	2	*
3	3	* This file is a part of LEMON, a generic C++ optimization library.
4	4	*
5	5	* Copyright (C) 2003-2008
6	6	* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
7	7	* (Egervary Research Group on Combinatorial Optimization, EGRES).
8	8	*
9	9	* Permission to use, modify and distribute this software is granted
10	10	* provided that this copyright notice appears in all copies. For
11	11	* precise terms see the accompanying LICENSE file.
12	12	*
13	13	* This software is provided "AS IS" with no warranty of any kind,
14	14	* express or implied, and with no claim as to its suitability for any
15	15	* purpose.
16	16	*
17	17	*/
18	18
19	19	#include <lemon/clp.h>
20	20	#include <coin/ClpSimplex.hpp>
21	21
22	22	namespace lemon {
23	23
24	24	ClpLp::ClpLp() {
25	25	_prob = new ClpSimplex();
26	26	_init_temporals();
27	27	messageLevel(MESSAGE_NOTHING);
28	28	}
29	29
30	30	ClpLp::ClpLp(const ClpLp& other) {
31	31	_prob = new ClpSimplex(*other._prob);
32	32	rows = other.rows;
33	33	cols = other.cols;
34	34	_init_temporals();
35	35	messageLevel(MESSAGE_NOTHING);
36	36	}
37	37
38	38	ClpLp::~ClpLp() {
39	39	delete _prob;
40	40	_clear_temporals();
41	41	}
42	42
43	43	void ClpLp::_init_temporals() {
44	44	_primal_ray = 0;
45	45	_dual_ray = 0;
46	46	}
47	47
48	48	void ClpLp::_clear_temporals() {
49	49	if (_primal_ray) {
50	50	delete[] _primal_ray;
51	51	_primal_ray = 0;
52	52	}
53	53	if (_dual_ray) {
54	54	delete[] _dual_ray;
55	55	_dual_ray = 0;
56	56	}
57	57	}
58	58
59	59	ClpLp* ClpLp::newSolver() const {
60	60	ClpLp* newlp = new ClpLp;
61	61	return newlp;
62	62	}
63	63
64	64	ClpLp* ClpLp::cloneSolver() const {
65	65	ClpLp* copylp = new ClpLp(*this);
66	66	return copylp;
67	67	}
68	68
69	69	const char* ClpLp::_solverName() const { return "ClpLp"; }
70	70
71	71	int ClpLp::_addCol() {
72	72	_prob->addColumn(0, 0, 0, -COIN_DBL_MAX, COIN_DBL_MAX, 0.0);
73	73	return _prob->numberColumns() - 1;
74	74	}
75	75
76	76	int ClpLp::_addRow() {
77	77	_prob->addRow(0, 0, 0, -COIN_DBL_MAX, COIN_DBL_MAX);
78	78	return _prob->numberRows() - 1;
79	79	}
80	80
	81	int ClpLp::_addRow(Value l, ExprIterator b, ExprIterator e, Value u) {
	82	std::vector<int> indexes;
	83	std::vector<Value> values;
	84
	85	for(ExprIterator it = b; it != e; ++it) {
	86	indexes.push_back(it->first);
	87	values.push_back(it->second);
	88	}
	89
	90	_prob->addRow(values.size(), &indexes.front(), &values.front(), l, u);
	91	return _prob->numberRows() - 1;
	92	}
	93
81	94
82	95	void ClpLp::_eraseCol(int c) {
83	96	_col_names_ref.erase(_prob->getColumnName(c));
84	97	_prob->deleteColumns(1, &c);
85	98	}
86	99
87	100	void ClpLp::_eraseRow(int r) {
88	101	_row_names_ref.erase(_prob->getRowName(r));
89	102	_prob->deleteRows(1, &r);
90	103	}
91	104
92	105	void ClpLp::_eraseColId(int i) {
93	106	cols.eraseIndex(i);
94	107	cols.shiftIndices(i);
95	108	}
96	109
97	110	void ClpLp::_eraseRowId(int i) {
98	111	rows.eraseIndex(i);
99	112	rows.shiftIndices(i);
100	113	}
101	114
102	115	void ClpLp::_getColName(int c, std::string& name) const {
103	116	name = _prob->getColumnName(c);
104	117	}
105	118
106	119	void ClpLp::_setColName(int c, const std::string& name) {
107	120	_prob->setColumnName(c, const_cast<std::string&>(name));
108	121	_col_names_ref[name] = c;
109	122	}
110	123
111	124	int ClpLp::_colByName(const std::string& name) const {
112	125	std::map<std::string, int>::const_iterator it = _col_names_ref.find(name);
113	126	return it != _col_names_ref.end() ? it->second : -1;
114	127	}
115	128
116	129	void ClpLp::_getRowName(int r, std::string& name) const {
117	130	name = _prob->getRowName(r);
118	131	}
119	132
120	133	void ClpLp::_setRowName(int r, const std::string& name) {
121	134	_prob->setRowName(r, const_cast<std::string&>(name));
122	135	_row_names_ref[name] = r;
123	136	}
124	137
125	138	int ClpLp::_rowByName(const std::string& name) const {
126	139	std::map<std::string, int>::const_iterator it = _row_names_ref.find(name);
127	140	return it != _row_names_ref.end() ? it->second : -1;
128	141	}
129	142
130	143
131	144	void ClpLp::_setRowCoeffs(int ix, ExprIterator b, ExprIterator e) {
132	145	std::map<int, Value> coeffs;
133	146
134	147	int n = _prob->clpMatrix()->getNumCols();
135	148
136	149	const int* indices = _prob->clpMatrix()->getIndices();
137	150	const double* elements = _prob->clpMatrix()->getElements();
138	151
139	152	for (int i = 0; i < n; ++i) {
140	153	CoinBigIndex begin = _prob->clpMatrix()->getVectorStarts()[i];
141	154	CoinBigIndex end = begin + _prob->clpMatrix()->getVectorLengths()[i];
142	155
143	156	const int* it = std::lower_bound(indices + begin, indices + end, ix);
144	157	if (it != indices + end && *it == ix && elements[it - indices] != 0.0) {
145	158	coeffs[i] = 0.0;
146	159	}
147	160	}
148	161
149	162	for (ExprIterator it = b; it != e; ++it) {
150	163	coeffs[it->first] = it->second;
151	164	}
152	165
153	166	for (std::map<int, Value>::iterator it = coeffs.begin();
154	167	it != coeffs.end(); ++it) {
155	168	_prob->modifyCoefficient(ix, it->first, it->second);
156	169	}
157	170	}
158	171
159	172	void ClpLp::_getRowCoeffs(int ix, InsertIterator b) const {
160	173	int n = _prob->clpMatrix()->getNumCols();
161	174
162	175	const int* indices = _prob->clpMatrix()->getIndices();
163	176	const double* elements = _prob->clpMatrix()->getElements();
164	177
165	178	for (int i = 0; i < n; ++i) {
166	179	CoinBigIndex begin = _prob->clpMatrix()->getVectorStarts()[i];
167	180	CoinBigIndex end = begin + _prob->clpMatrix()->getVectorLengths()[i];
168	181
169	182	const int* it = std::lower_bound(indices + begin, indices + end, ix);
170	183	if (it != indices + end && *it == ix) {
171	184	*b = std::make_pair(i, elements[it - indices]);
172	185	}
173	186	}
174	187	}
175	188
176	189	void ClpLp::_setColCoeffs(int ix, ExprIterator b, ExprIterator e) {
177	190	std::map<int, Value> coeffs;
178	191
179	192	CoinBigIndex begin = _prob->clpMatrix()->getVectorStarts()[ix];
180	193	CoinBigIndex end = begin + _prob->clpMatrix()->getVectorLengths()[ix];
181	194
182	195	const int* indices = _prob->clpMatrix()->getIndices();
183	196	const double* elements = _prob->clpMatrix()->getElements();
184	197
185	198	for (CoinBigIndex i = begin; i != end; ++i) {
186	199	if (elements[i] != 0.0) {
187	200	coeffs[indices[i]] = 0.0;
188	201	}
189	202	}
190	203	for (ExprIterator it = b; it != e; ++it) {
191	204	coeffs[it->first] = it->second;
192	205	}
193	206	for (std::map<int, Value>::iterator it = coeffs.begin();
194	207	it != coeffs.end(); ++it) {
195	208	_prob->modifyCoefficient(it->first, ix, it->second);
196	209	}
197	210	}
198	211
199	212	void ClpLp::_getColCoeffs(int ix, InsertIterator b) const {
200	213	CoinBigIndex begin = _prob->clpMatrix()->getVectorStarts()[ix];
201	214	CoinBigIndex end = begin + _prob->clpMatrix()->getVectorLengths()[ix];
202	215
203	216	const int* indices = _prob->clpMatrix()->getIndices();
204	217	const double* elements = _prob->clpMatrix()->getElements();
205	218
206	219	for (CoinBigIndex i = begin; i != end; ++i) {
207	220	*b = std::make_pair(indices[i], elements[i]);
208	221	++b;
209	222	}
210	223	}
211	224
212	225	void ClpLp::_setCoeff(int ix, int jx, Value value) {
213	226	_prob->modifyCoefficient(ix, jx, value);
214	227	}
215	228
216	229	ClpLp::Value ClpLp::_getCoeff(int ix, int jx) const {
217	230	CoinBigIndex begin = _prob->clpMatrix()->getVectorStarts()[ix];
218	231	CoinBigIndex end = begin + _prob->clpMatrix()->getVectorLengths()[ix];
219	232
220	233	const int* indices = _prob->clpMatrix()->getIndices();
221	234	const double* elements = _prob->clpMatrix()->getElements();
222	235
223	236	const int* it = std::lower_bound(indices + begin, indices + end, jx);
224	237	if (it != indices + end && *it == jx) {
225	238	return elements[it - indices];
226	239	} else {
227	240	return 0.0;
228	241	}
229	242	}
230	243
231	244	void ClpLp::_setColLowerBound(int i, Value lo) {
232	245	_prob->setColumnLower(i, lo == - INF ? - COIN_DBL_MAX : lo);
233	246	}
234	247
235	248	ClpLp::Value ClpLp::_getColLowerBound(int i) const {
236	249	double val = _prob->getColLower()[i];
237	250	return val == - COIN_DBL_MAX ? - INF : val;
238	251	}
239	252
240	253	void ClpLp::_setColUpperBound(int i, Value up) {
241	254	_prob->setColumnUpper(i, up == INF ? COIN_DBL_MAX : up);
242	255	}
243	256
244	257	ClpLp::Value ClpLp::_getColUpperBound(int i) const {
245	258	double val = _prob->getColUpper()[i];
246	259	return val == COIN_DBL_MAX ? INF : val;
247	260	}
248	261
249	262	void ClpLp::_setRowLowerBound(int i, Value lo) {
250	263	_prob->setRowLower(i, lo == - INF ? - COIN_DBL_MAX : lo);
251	264	}
252	265
253	266	ClpLp::Value ClpLp::_getRowLowerBound(int i) const {
254	267	double val = _prob->getRowLower()[i];
255	268	return val == - COIN_DBL_MAX ? - INF : val;
256	269	}
257	270
258	271	void ClpLp::_setRowUpperBound(int i, Value up) {
259	272	_prob->setRowUpper(i, up == INF ? COIN_DBL_MAX : up);
260	273	}
261	274
262	275	ClpLp::Value ClpLp::_getRowUpperBound(int i) const {
263	276	double val = _prob->getRowUpper()[i];
264	277	return val == COIN_DBL_MAX ? INF : val;
265	278	}
266	279
267	280	void ClpLp::_setObjCoeffs(ExprIterator b, ExprIterator e) {
268	281	int num = _prob->clpMatrix()->getNumCols();
269	282	for (int i = 0; i < num; ++i) {
270	283	_prob->setObjectiveCoefficient(i, 0.0);
271	284	}
272	285	for (ExprIterator it = b; it != e; ++it) {
273	286	_prob->setObjectiveCoefficient(it->first, it->second);
274	287	}
275	288	}
276	289
277	290	void ClpLp::_getObjCoeffs(InsertIterator b) const {
278	291	int num = _prob->clpMatrix()->getNumCols();
279	292	for (int i = 0; i < num; ++i) {
280	293	Value coef = _prob->getObjCoefficients()[i];
281	294	if (coef != 0.0) {
282	295	*b = std::make_pair(i, coef);
283	296	++b;
284	297	}
285	298	}
286	299	}
287	300
288	301	void ClpLp::_setObjCoeff(int i, Value obj_coef) {
289	302	_prob->setObjectiveCoefficient(i, obj_coef);
290	303	}
291	304
292	305	ClpLp::Value ClpLp::_getObjCoeff(int i) const {
293	306	return _prob->getObjCoefficients()[i];
294	307	}
295	308
296	309	ClpLp::SolveExitStatus ClpLp::_solve() {
297	310	return _prob->primal() >= 0 ? SOLVED : UNSOLVED;
298	311	}
299	312
300	313	ClpLp::SolveExitStatus ClpLp::solvePrimal() {
301	314	return _prob->primal() >= 0 ? SOLVED : UNSOLVED;
302	315	}
303	316
304	317	ClpLp::SolveExitStatus ClpLp::solveDual() {
305	318	return _prob->dual() >= 0 ? SOLVED : UNSOLVED;
306	319	}
307	320
308	321	ClpLp::SolveExitStatus ClpLp::solveBarrier() {
309	322	return _prob->barrier() >= 0 ? SOLVED : UNSOLVED;
310	323	}
311	324
312	325	ClpLp::Value ClpLp::_getPrimal(int i) const {
313	326	return _prob->primalColumnSolution()[i];
314	327	}
315	328	ClpLp::Value ClpLp::_getPrimalValue() const {
316	329	return _prob->objectiveValue();
317	330	}
318	331
319	332	ClpLp::Value ClpLp::_getDual(int i) const {
320	333	return _prob->dualRowSolution()[i];
321	334	}
322	335
323	336	ClpLp::Value ClpLp::_getPrimalRay(int i) const {
324	337	if (!_primal_ray) {
325	338	_primal_ray = _prob->unboundedRay();
326	339	LEMON_ASSERT(_primal_ray != 0, "Primal ray is not provided");
327	340	}
328	341	return _primal_ray[i];
329	342	}
330	343
331	344	ClpLp::Value ClpLp::_getDualRay(int i) const {
332	345	if (!_dual_ray) {
333	346	_dual_ray = _prob->infeasibilityRay();
334	347	LEMON_ASSERT(_dual_ray != 0, "Dual ray is not provided");
335	348	}
336	349	return _dual_ray[i];