Location: LEMON/LEMON-main/lemon/lgf_reader.h

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deba@inf.elte.hu
SmartGraph addEdge bug fix (ticket #88)
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/* -*- C++ -*-
*
* This file is a part of LEMON, a generic C++ optimization library
*
* Copyright (C) 2003-2008
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribute this software is granted
* provided that this copyright notice appears in all copies. For
* precise terms see the accompanying LICENSE file.
*
* This software is provided "AS IS" with no warranty of any kind,
* express or implied, and with no claim as to its suitability for any
* purpose.
*
*/
///\ingroup lemon_io
///\file
///\brief Lemon Graph Format reader.
#ifndef LEMON_LGF_READER_H
#define LEMON_LGF_READER_H
#include <iostream>
#include <fstream>
#include <sstream>
#include <set>
#include <map>
#include <lemon/assert.h>
#include <lemon/graph_utils.h>
#include <lemon/lgf_writer.h>
#include <lemon/concept_check.h>
#include <lemon/concepts/maps.h>
namespace lemon {
namespace _reader_bits {
template <typename Value>
struct DefaultConverter {
Value operator()(const std::string& str) {
std::istringstream is(str);
Value value;
is >> value;
char c;
if (is >> std::ws >> c) {
throw DataFormatError("Remaining characters in token");
}
return value;
}
};
template <>
struct DefaultConverter<std::string> {
std::string operator()(const std::string& str) {
return str;
}
};
template <typename _Item>
class MapStorageBase {
public:
typedef _Item Item;
public:
MapStorageBase() {}
virtual ~MapStorageBase() {}
virtual void set(const Item& item, const std::string& value) = 0;
};
template <typename _Item, typename _Map,
typename _Converter = DefaultConverter<typename _Map::Value> >
class MapStorage : public MapStorageBase<_Item> {
public:
typedef _Map Map;
typedef _Converter Converter;
typedef _Item Item;
private:
Map& _map;
Converter _converter;
public:
MapStorage(Map& map, const Converter& converter = Converter())
: _map(map), _converter(converter) {}
virtual ~MapStorage() {}
virtual void set(const Item& item ,const std::string& value) {
_map.set(item, _converter(value));
}
};
class ValueStorageBase {
public:
ValueStorageBase() {}
virtual ~ValueStorageBase() {}
virtual void set(const std::string&) = 0;
};
template <typename _Value, typename _Converter = DefaultConverter<_Value> >
class ValueStorage : public ValueStorageBase {
public:
typedef _Value Value;
typedef _Converter Converter;
private:
Value& _value;
Converter _converter;
public:
ValueStorage(Value& value, const Converter& converter = Converter())
: _value(value), _converter(converter) {}
virtual void set(const std::string& value) {
_value = _converter(value);
}
};
template <typename Value>
struct MapLookUpConverter {
const std::map<std::string, Value>& _map;
MapLookUpConverter(const std::map<std::string, Value>& map)
: _map(map) {}
Value operator()(const std::string& str) {
typename std::map<std::string, Value>::const_iterator it =
_map.find(str);
if (it == _map.end()) {
std::ostringstream msg;
msg << "Item not found: " << str;
throw DataFormatError(msg.str().c_str());
}
return it->second;
}
};
bool isWhiteSpace(char c) {
return c == ' ' || c == '\t' || c == '\v' ||
c == '\n' || c == '\r' || c == '\f';
}
bool isOct(char c) {
return '0' <= c && c <='7';
}
int valueOct(char c) {
LEMON_ASSERT(isOct(c), "The character is not octal.");
return c - '0';
}
bool isHex(char c) {
return ('0' <= c && c <= '9') ||
('a' <= c && c <= 'z') ||
('A' <= c && c <= 'Z');
}
int valueHex(char c) {
LEMON_ASSERT(isHex(c), "The character is not hexadecimal.");
if ('0' <= c && c <= '9') return c - '0';
if ('a' <= c && c <= 'z') return c - 'a' + 10;
return c - 'A' + 10;
}
bool isIdentifierFirstChar(char c) {
return ('a' <= c && c <= 'z') ||
('A' <= c && c <= 'Z') || c == '_';
}
bool isIdentifierChar(char c) {
return isIdentifierFirstChar(c) ||
('0' <= c && c <= '9');
}
char readEscape(std::istream& is) {
char c;
if (!is.get(c))
throw DataFormatError("Escape format error");
switch (c) {
case '\\':
return '\\';
case '\"':
return '\"';
case '\'':
return '\'';
case '\?':
return '\?';
case 'a':
return '\a';
case 'b':
return '\b';
case 'f':
return '\f';
case 'n':
return '\n';
case 'r':
return '\r';
case 't':
return '\t';
case 'v':
return '\v';
case 'x':
{
int code;
if (!is.get(c) || !isHex(c))
throw DataFormatError("Escape format error");
else if (code = valueHex(c), !is.get(c) || !isHex(c)) is.putback(c);
else code = code * 16 + valueHex(c);
return code;
}
default:
{
int code;
if (!isOct(c))
throw DataFormatError("Escape format error");
else if (code = valueOct(c), !is.get(c) || !isOct(c))
is.putback(c);
else if (code = code * 8 + valueOct(c), !is.get(c) || !isOct(c))
is.putback(c);
else code = code * 8 + valueOct(c);
return code;
}
}
}
std::istream& readToken(std::istream& is, std::string& str) {
std::ostringstream os;
char c;
is >> std::ws;
if (!is.get(c))
return is;
if (c == '\"') {
while (is.get(c) && c != '\"') {
if (c == '\\')
c = readEscape(is);
os << c;
}
if (!is)
throw DataFormatError("Quoted format error");
} else {
is.putback(c);
while (is.get(c) && !isWhiteSpace(c)) {
if (c == '\\')
c = readEscape(is);
os << c;
}
if (!is) {
is.clear();
} else {
is.putback(c);
}
}
str = os.str();
return is;
}
std::istream& readIdentifier(std::istream& is, std::string& str) {
std::ostringstream os;
char c;
is >> std::ws;
if (!is.get(c))
return is;
if (!isIdentifierFirstChar(c))
throw DataFormatError("Wrong char in identifier");
os << c;
while (is.get(c) && !isWhiteSpace(c)) {
if (!isIdentifierChar(c))
throw DataFormatError("Wrong char in identifier");
os << c;
}
if (!is) is.clear();
str = os.str();
return is;
}
}
/// \e
template <typename _Digraph>
class DigraphReader {
public:
typedef _Digraph Digraph;
GRAPH_TYPEDEFS(typename Digraph);
private:
std::istream* _is;
bool local_is;
Digraph& _digraph;
std::string _nodes_caption;
std::string _arcs_caption;
std::string _attributes_caption;
typedef std::map<std::string, Node> NodeIndex;
NodeIndex _node_index;
typedef std::map<std::string, Arc> ArcIndex;
ArcIndex _arc_index;
typedef std::vector<std::pair<std::string,
_reader_bits::MapStorageBase<Node>*> > NodeMaps;
NodeMaps _node_maps;
typedef std::vector<std::pair<std::string,
_reader_bits::MapStorageBase<Arc>*> >ArcMaps;
ArcMaps _arc_maps;
typedef std::multimap<std::string, _reader_bits::ValueStorageBase*>
Attributes;
Attributes _attributes;
bool _use_nodes;
bool _use_arcs;
int line_num;
std::istringstream line;
public:
/// \e
DigraphReader(std::istream& is, Digraph& digraph)
: _is(&is), local_is(false), _digraph(digraph),
_use_nodes(false), _use_arcs(false) {}
/// \e
DigraphReader(const std::string& fn, Digraph& digraph)
: _is(new std::ifstream(fn.c_str())), local_is(true), _digraph(digraph),
_use_nodes(false), _use_arcs(false) {}
/// \e
DigraphReader(const char* fn, Digraph& digraph)
: _is(new std::ifstream(fn)), local_is(true), _digraph(digraph),
_use_nodes(false), _use_arcs(false) {}
/// \e
DigraphReader(DigraphReader& other)
: _is(other._is), local_is(other.local_is), _digraph(other._digraph),
_use_nodes(other._use_nodes), _use_arcs(other._use_arcs) {
other.is = 0;
other.local_is = false;
_node_index.swap(other._node_index);
_arc_index.swap(other._arc_index);
_node_maps.swap(other._node_maps);
_arc_maps.swap(other._arc_maps);
_attributes.swap(other._attributes);
_nodes_caption = other._nodes_caption;
_arcs_caption = other._arcs_caption;
_attributes_caption = other._attributes_caption;
}
/// \e
~DigraphReader() {
for (typename NodeMaps::iterator it = _node_maps.begin();
it != _node_maps.end(); ++it) {
delete it->second;
}
for (typename ArcMaps::iterator it = _arc_maps.begin();
it != _arc_maps.end(); ++it) {
delete it->second;
}
for (typename Attributes::iterator it = _attributes.begin();
it != _attributes.end(); ++it) {
delete it->second;
}
if (local_is) {
delete _is;
}
}
private:
DigraphReader& operator=(const DigraphReader&);
public:
/// \e
template <typename Map>
DigraphReader& nodeMap(const std::string& caption, Map& map) {
checkConcept<concepts::WriteMap<Node, typename Map::Value>, Map>();
_reader_bits::MapStorageBase<Node>* storage =
new _reader_bits::MapStorage<Node, Map>(map);
_node_maps.push_back(std::make_pair(caption, storage));
return *this;
}
/// \e
template <typename Map, typename Converter>
DigraphReader& nodeMap(const std::string& caption, Map& map,
const Converter& converter = Converter()) {
checkConcept<concepts::WriteMap<Node, typename Map::Value>, Map>();
_reader_bits::MapStorageBase<Node>* storage =
new _reader_bits::MapStorage<Node, Map, Converter>(map, converter);
_node_maps.push_back(std::make_pair(caption, storage));
return *this;
}
/// \e
template <typename Map>
DigraphReader& arcMap(const std::string& caption, Map& map) {
checkConcept<concepts::WriteMap<Arc, typename Map::Value>, Map>();
_reader_bits::MapStorageBase<Arc>* storage =
new _reader_bits::MapStorage<Arc, Map>(map);
_arc_maps.push_back(std::make_pair(caption, storage));
return *this;
}
/// \e
template <typename Map, typename Converter>
DigraphReader& arcMap(const std::string& caption, Map& map,
const Converter& converter = Converter()) {
checkConcept<concepts::WriteMap<Arc, typename Map::Value>, Map>();
_reader_bits::MapStorageBase<Arc>* storage =
new _reader_bits::MapStorage<Arc, Map, Converter>(map, converter);
_arc_maps.push_back(std::make_pair(caption, storage));
return *this;
}
/// \e
template <typename Value>
DigraphReader& attribute(const std::string& caption, Value& value) {
_reader_bits::ValueStorageBase* storage =
new _reader_bits::ValueStorage<Value>(value);
_attributes.insert(std::make_pair(caption, storage));
return *this;
}
/// \e
template <typename Value, typename Converter>
DigraphReader& attribute(const std::string& caption, Value& value,
const Converter& converter = Converter()) {
_reader_bits::ValueStorageBase* storage =
new _reader_bits::ValueStorage<Value, Converter>(value, converter);
_attributes.insert(std::make_pair(caption, storage));
return *this;
}
/// \e
DigraphReader& node(const std::string& caption, Node& node) {
typedef _reader_bits::MapLookUpConverter<Node> Converter;
Converter converter(_node_index);
_reader_bits::ValueStorageBase* storage =
new _reader_bits::ValueStorage<Node, Converter>(node, converter);
_attributes.insert(std::make_pair(caption, storage));
return *this;
}
/// \e
DigraphReader& arc(const std::string& caption, Arc& arc) {
typedef _reader_bits::MapLookUpConverter<Arc> Converter;
Converter converter(_arc_index);
_reader_bits::ValueStorageBase* storage =
new _reader_bits::ValueStorage<Arc, Converter>(arc, converter);
_attributes.insert(std::make_pair(caption, storage));
return *this;
}
/// \e
DigraphReader& nodes(const std::string& caption) {
_nodes_caption = caption;
return *this;
}
/// \e
DigraphReader& arcs(const std::string& caption) {
_arcs_caption = caption;
return *this;
}
/// \e
DigraphReader& attributes(const std::string& caption) {
_attributes_caption = caption;
return *this;
}
/// \e
template <typename Map>
DigraphReader& useNodes(const Map& map) {
checkConcept<concepts::ReadMap<Node, typename Map::Value>, Map>();
LEMON_ASSERT(!_use_nodes, "Multiple usage of useNodes() member");
_use_nodes = true;
_writer_bits::DefaultConverter<typename Map::Value> converter;
for (NodeIt n(_digraph); n != INVALID; ++n) {
_node_index.insert(std::make_pair(converter(map[n]), n));
}
return *this;
}
/// \e
template <typename Map, typename Converter>
DigraphReader& useNodes(const Map& map,
const Converter& converter = Converter()) {
checkConcept<concepts::ReadMap<Node, typename Map::Value>, Map>();
LEMON_ASSERT(!_use_nodes, "Multiple usage of useNodes() member");
_use_nodes = true;
for (NodeIt n(_digraph); n != INVALID; ++n) {
_node_index.insert(std::make_pair(converter(map[n]), n));
}
return *this;
}
/// \e
template <typename Map>
DigraphReader& useArcs(const Map& map) {
checkConcept<concepts::ReadMap<Arc, typename Map::Value>, Map>();
LEMON_ASSERT(!_use_arcs, "Multiple usage of useArcs() member");
_use_arcs = true;
_writer_bits::DefaultConverter<typename Map::Value> converter;
for (ArcIt a(_digraph); a != INVALID; ++a) {
_arc_index.insert(std::make_pair(converter(map[a]), a));
}
return *this;
}
/// \e
template <typename Map, typename Converter>
DigraphReader& useArcs(const Map& map,
const Converter& converter = Converter()) {
checkConcept<concepts::ReadMap<Arc, typename Map::Value>, Map>();
LEMON_ASSERT(!_use_arcs, "Multiple usage of useArcs() member");
_use_arcs = true;
for (ArcIt a(_digraph); a != INVALID; ++a) {
_arc_index.insert(std::make_pair(converter(map[a]), a));
}
return *this;
}
private:
bool readLine() {
std::string str;
while(++line_num, std::getline(*_is, str)) {
line.clear(); line.str(str);
char c;
if (line >> std::ws >> c && c != '#') {
line.putback(c);
return true;
}
}
return false;
}
bool readSuccess() {
return static_cast<bool>(*_is);
}
void skipSection() {
char c;
while (readSuccess() && line >> c && c != '@') {
readLine();
}
line.putback(c);
}
void readNodes() {
std::vector<int> map_index(_node_maps.size());
int map_num, label_index;
if (!readLine())
throw DataFormatError("Cannot find map captions");
{
std::map<std::string, int> maps;
std::string map;
int index = 0;
while (_reader_bits::readIdentifier(line, map)) {
if (maps.find(map) != maps.end()) {
std::ostringstream msg;
msg << "Multiple occurence of node map: " << map;
throw DataFormatError(msg.str().c_str());
}
maps.insert(std::make_pair(map, index));
++index;
}
for (int i = 0; i < static_cast<int>(_node_maps.size()); ++i) {
std::map<std::string, int>::iterator jt =
maps.find(_node_maps[i].first);
if (jt == maps.end()) {
std::ostringstream msg;
msg << "Map not found in file: " << _node_maps[i].first;
throw DataFormatError(msg.str().c_str());
}
map_index[i] = jt->second;
}
{
std::map<std::string, int>::iterator jt = maps.find("label");
if (jt == maps.end())
throw DataFormatError("Label map not found in file");
label_index = jt->second;
}
map_num = maps.size();
}
char c;
while (readLine() && line >> c && c != '@') {
line.putback(c);
std::vector<std::string> tokens(map_num);
for (int i = 0; i < map_num; ++i) {
if (!_reader_bits::readToken(line, tokens[i])) {
std::ostringstream msg;
msg << "Column not found (" << i + 1 << ")";
throw DataFormatError(msg.str().c_str());
}
}
if (line >> std::ws >> c)
throw DataFormatError("Extra character on the end of line");
Node n;
if (!_use_nodes) {
n = _digraph.addNode();
_node_index.insert(std::make_pair(tokens[label_index], n));
} else {
typename std::map<std::string, Node>::iterator it =
_node_index.find(tokens[label_index]);
if (it == _node_index.end()) {
std::ostringstream msg;
msg << "Node with label not found: " << tokens[label_index];
throw DataFormatError(msg.str().c_str());
}
n = it->second;
}
for (int i = 0; i < static_cast<int>(_node_maps.size()); ++i) {
_node_maps[i].second->set(n, tokens[map_index[i]]);
}
}
if (readSuccess()) {
line.putback(c);
}
}
void readArcs() {
std::vector<int> map_index(_arc_maps.size());
int map_num, label_index;
if (!readLine())
throw DataFormatError("Cannot find map captions");
{
std::map<std::string, int> maps;
std::string map;
int index = 0;
while (_reader_bits::readIdentifier(line, map)) {
if (maps.find(map) != maps.end()) {
std::ostringstream msg;
msg << "Multiple occurence of arc map: " << map;
throw DataFormatError(msg.str().c_str());
}
maps.insert(std::make_pair(map, index));
++index;
}
for (int i = 0; i < static_cast<int>(_arc_maps.size()); ++i) {
std::map<std::string, int>::iterator jt =
maps.find(_arc_maps[i].first);
if (jt == maps.end()) {
std::ostringstream msg;
msg << "Map not found in file: " << _arc_maps[i].first;
throw DataFormatError(msg.str().c_str());
}
map_index[i] = jt->second;
}
{
std::map<std::string, int>::iterator jt = maps.find("label");
if (jt == maps.end())
throw DataFormatError("Label map not found in file");
label_index = jt->second;
}
map_num = maps.size();
}
char c;
while (readLine() && line >> c && c != '@') {
line.putback(c);
std::string source_token;
std::string target_token;
if (!_reader_bits::readToken(line, source_token))
throw DataFormatError("Source not found");
if (!_reader_bits::readToken(line, target_token))
throw DataFormatError("Source not found");
std::vector<std::string> tokens(map_num);
for (int i = 0; i < map_num; ++i) {
if (!_reader_bits::readToken(line, tokens[i])) {
std::ostringstream msg;
msg << "Column not found (" << i + 1 << ")";
throw DataFormatError(msg.str().c_str());
}
}
if (line >> std::ws >> c)
throw DataFormatError("Extra character on the end of line");
Arc a;
if (!_use_arcs) {
typename NodeIndex::iterator it;
it = _node_index.find(source_token);
if (it == _node_index.end()) {
std::ostringstream msg;
msg << "Item not found: " << source_token;
throw DataFormatError(msg.str().c_str());
}
Node source = it->second;
it = _node_index.find(target_token);
if (it == _node_index.end()) {
std::ostringstream msg;
msg << "Item not found: " << target_token;
throw DataFormatError(msg.str().c_str());
}
Node target = it->second;
a = _digraph.addArc(source, target);
_arc_index.insert(std::make_pair(tokens[label_index], a));
} else {
typename std::map<std::string, Arc>::iterator it =
_arc_index.find(tokens[label_index]);
if (it == _arc_index.end()) {
std::ostringstream msg;
msg << "Arc with label not found: " << tokens[label_index];
throw DataFormatError(msg.str().c_str());
}
a = it->second;
}
for (int i = 0; i < static_cast<int>(_arc_maps.size()); ++i) {
_arc_maps[i].second->set(a, tokens[map_index[i]]);
}
}
if (readSuccess()) {
line.putback(c);
}
}
void readAttributes() {
std::set<std::string> read_attr;
char c;
while (readLine() && line >> c && c != '@') {
line.putback(c);
std::string attr, token;
if (!_reader_bits::readIdentifier(line, attr))
throw DataFormatError("Attribute name not found");
if (!_reader_bits::readToken(line, token))
throw DataFormatError("Attribute value not found");
if (line >> c)
throw DataFormatError("Extra character on the end of line");
{
std::set<std::string>::iterator it = read_attr.find(attr);
if (it != read_attr.end()) {
std::ostringstream msg;
msg << "Multiple occurence of attribute " << attr;
throw DataFormatError(msg.str().c_str());
}
read_attr.insert(attr);
}
{
typename Attributes::iterator it = _attributes.lower_bound(attr);
while (it != _attributes.end() && it->first == attr) {
it->second->set(token);
++it;
}
}
}
if (readSuccess()) {
line.putback(c);
}
for (typename Attributes::iterator it = _attributes.begin();
it != _attributes.end(); ++it) {
if (read_attr.find(it->first) == read_attr.end()) {
std::ostringstream msg;
msg << "Attribute not found in file: " << it->first;
throw DataFormatError(msg.str().c_str());
}
}
}
public:
/// \e
void run() {
LEMON_ASSERT(_is != 0, "This reader assigned to an other reader");
bool nodes_done = false;
bool arcs_done = false;
bool attributes_done = false;
line_num = 0;
readLine();
while (readSuccess()) {
skipSection();
try {
char c;
std::string section, caption;
line >> c;
_reader_bits::readIdentifier(line, section);
_reader_bits::readIdentifier(line, caption);
if (line >> c)
throw DataFormatError("Extra character on the end of line");
if (section == "nodes" && !nodes_done) {
if (_nodes_caption.empty() || _nodes_caption == caption) {
readNodes();
nodes_done = true;
}
} else if ((section == "arcs" || section == "edges") &&
!arcs_done) {
if (_arcs_caption.empty() || _arcs_caption == caption) {
readArcs();
arcs_done = true;
}
} else if (section == "attributes" && !attributes_done) {
if (_attributes_caption.empty() || _attributes_caption == caption) {
readAttributes();
attributes_done = true;
}
} else {
readLine();
skipSection();
}
} catch (DataFormatError& error) {
error.line(line_num);
throw;
}
}
if (!nodes_done) {
throw DataFormatError("Section @nodes not found");
}
if (!arcs_done) {
throw DataFormatError("Section @arcs not found");
}
if (!attributes_done && !_attributes.empty()) {
throw DataFormatError("Section @attributes not found");
}
}
};
template <typename Digraph>
DigraphReader<Digraph> digraphReader(std::istream& is, Digraph& digraph) {
return DigraphReader<Digraph>(is, digraph);
}
template <typename Digraph>
DigraphReader<Digraph> digraphReader(const std::string& fn,
Digraph& digraph) {
return DigraphReader<Digraph>(fn, digraph);
}
template <typename Digraph>
DigraphReader<Digraph> digraphReader(const char* fn, Digraph& digraph) {
return DigraphReader<Digraph>(fn, digraph);
}
}
#endif