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... ...
@@ -74,7 +74,7 @@
74 74
    /// \c PRE_HEAP (<tt>-1</tt>) to any element to be put in the heap.
75 75
    enum State {
76
      IN_HEAP = 0,    ///< \e
77
      PRE_HEAP = -1,  ///< \e
78
      POST_HEAP = -2  ///< \e
76
      IN_HEAP = 0,    ///< = 0.
77
      PRE_HEAP = -1,  ///< = -1.
78
      POST_HEAP = -2  ///< = -2.
79 79
    };
80 80

	
Ignore white space 6 line context
... ...
@@ -603,5 +603,5 @@
603 603
      typedef IterableDigraphComponent Digraph;
604 604

	
605
      /// \name Base iteration
605
      /// \name Base Iteration
606 606
      ///
607 607
      /// This interface provides functions for iteration on digraph items.
... ...
@@ -655,5 +655,5 @@
655 655
      /// @}
656 656

	
657
      /// \name Class based iteration
657
      /// \name Class Based Iteration
658 658
      ///
659 659
      /// This interface provides iterator classes for digraph items.
... ...
@@ -780,5 +780,5 @@
780 780
      typedef IterableGraphComponent Graph;
781 781

	
782
      /// \name Base iteration
782
      /// \name Base Iteration
783 783
      ///
784 784
      /// This interface provides functions for iteration on edges.
... ...
@@ -819,5 +819,5 @@
819 819
      /// @}
820 820

	
821
      /// \name Class based iteration
821
      /// \name Class Based Iteration
822 822
      ///
823 823
      /// This interface provides iterator classes for edges.
Ignore white space 6 line context
... ...
@@ -72,7 +72,7 @@
72 72
      /// \c PRE_HEAP (<tt>-1</tt>) to any element to be put in the heap.
73 73
      enum State {
74
        IN_HEAP = 0,    ///< The "in heap" state constant.
75
        PRE_HEAP = -1,  ///< The "pre heap" state constant.
76
        POST_HEAP = -2  ///< The "post heap" state constant.
74
        IN_HEAP = 0,    ///< = 0. The "in heap" state constant.
75
        PRE_HEAP = -1,  ///< = -1. The "pre heap" state constant.
76
        POST_HEAP = -2  ///< = -2. The "post heap" state constant.
77 77
      };
78 78

	
Ignore white space 6 line context
... ...
@@ -207,5 +207,5 @@
207 207
    typedef Dfs Create;
208 208

	
209
    ///\name Named template parameters
209
    ///\name Named Template Parameters
210 210

	
211 211
    ///@{
Ignore white space 6 line context
... ...
@@ -287,5 +287,5 @@
287 287
    typedef Dijkstra Create;
288 288

	
289
    ///\name Named template parameters
289
    ///\name Named Template Parameters
290 290

	
291 291
    ///@{
Ignore white space 6 line context
... ...
@@ -38,9 +38,14 @@
38 38
  struct DimacsDescriptor
39 39
  {
40
    ///File type enum
41
    enum Type
42
      {
43
        NONE, MIN, MAX, SP, MAT
44
      };
40
    ///\brief DIMACS file type enum
41
    ///
42
    ///DIMACS file type enum.
43
    enum Type {
44
      NONE,  ///< Undefined type.
45
      MIN,   ///< DIMACS file type for minimum cost flow problems.
46
      MAX,   ///< DIMACS file type for maximum flow problems.
47
      SP,    ///< DIMACS file type for shostest path problems.
48
      MAT    ///< DIMACS file type for plain graphs and matching problems.
49
    };
45 50
    ///The file type
46 51
    Type type;
... ...
@@ -50,5 +55,5 @@
50 55
    int edgeNum;
51 56
    int lineShift;
52
    /// Constructor. Sets the type to NONE.
57
    ///Constructor. It sets the type to \c NONE.
53 58
    DimacsDescriptor() : type(NONE) {}
54 59
  };
... ...
@@ -56,8 +61,8 @@
56 61
  ///Discover the type of a DIMACS file
57 62

	
58
  ///It starts seeking the beginning of the file for the problem type
59
  ///and size info. The found data is returned in a special struct
60
  ///that can be evaluated and passed to the appropriate reader
61
  ///function.
63
  ///This function starts seeking the beginning of the given file for the
64
  ///problem type and size info. 
65
  ///The found data is returned in a special struct that can be evaluated
66
  ///and passed to the appropriate reader function.
62 67
  DimacsDescriptor dimacsType(std::istream& is)
63 68
  {
... ...
@@ -97,6 +102,5 @@
97 102

	
98 103

	
99

	
100
  /// DIMACS minimum cost flow reader function.
104
  /// \brief DIMACS minimum cost flow reader function.
101 105
  ///
102 106
  /// This function reads a minimum cost flow instance from DIMACS format,
... ...
@@ -254,5 +258,5 @@
254 258
  }
255 259

	
256
  /// DIMACS maximum flow reader function.
260
  /// \brief DIMACS maximum flow reader function.
257 261
  ///
258 262
  /// This function reads a maximum flow instance from DIMACS format,
... ...
@@ -288,5 +292,5 @@
288 292
  }
289 293

	
290
  /// DIMACS shortest path reader function.
294
  /// \brief DIMACS shortest path reader function.
291 295
  ///
292 296
  /// This function reads a shortest path instance from DIMACS format,
... ...
@@ -314,5 +318,5 @@
314 318
  }
315 319

	
316
  /// DIMACS capacitated digraph reader function.
320
  /// \brief DIMACS capacitated digraph reader function.
317 321
  ///
318 322
  /// This function reads an arc capacitated digraph instance from
... ...
@@ -360,9 +364,9 @@
360 364
  }
361 365
  
362
  /// DIMACS plain (di)graph reader function.
366
  /// \brief DIMACS plain (di)graph reader function.
363 367
  ///
364
  /// This function reads a (di)graph without any designated nodes and
365
  /// maps from DIMACS format, i.e. from DIMACS files having a line
366
  /// starting with
368
  /// This function reads a plain (di)graph without any designated nodes
369
  /// and maps (e.g. a matching instance) from DIMACS format, i.e. from 
370
  /// DIMACS files having a line starting with
367 371
  /// \code
368 372
  ///   p mat
Ignore white space 6 line context
... ...
@@ -269,20 +269,16 @@
269 269
    ///\image html nodeshape_1.png
270 270
    ///\image latex nodeshape_1.eps "SQUARE shape (1)" width=2cm
271
    ///
272 271
    SQUARE=1,
273 272
    /// = 2
274 273
    ///\image html nodeshape_2.png
275 274
    ///\image latex nodeshape_2.eps "DIAMOND shape (2)" width=2cm
276
    ///
277 275
    DIAMOND=2,
278 276
    /// = 3
279 277
    ///\image html nodeshape_3.png
280
    ///\image latex nodeshape_2.eps "MALE shape (4)" width=2cm
281
    ///
278
    ///\image latex nodeshape_3.eps "MALE shape (3)" width=2cm
282 279
    MALE=3,
283 280
    /// = 4
284 281
    ///\image html nodeshape_4.png
285
    ///\image latex nodeshape_2.eps "FEMALE shape (4)" width=2cm
286
    ///
282
    ///\image latex nodeshape_4.eps "FEMALE shape (4)" width=2cm
287 283
    FEMALE=4
288 284
  };
Ignore white space 6 line context
... ...
@@ -249,9 +249,9 @@
249 249
  /// \ingroup spantree
250 250
  ///
251
  /// \brief Kruskal algorithm to find a minimum cost spanning tree of
251
  /// \brief Kruskal's algorithm for finding a minimum cost spanning tree of
252 252
  /// a graph.
253 253
  ///
254 254
  /// This function runs Kruskal's algorithm to find a minimum cost
255
  /// spanning tree.
255
  /// spanning tree of a graph.
256 256
  /// Due to some C++ hacking, it accepts various input and output types.
257 257
  ///
... ...
@@ -265,7 +265,7 @@
265 265
  /// It can be one of the following choices.
266 266
  /// - An STL compatible 'Forward Container' with
267
  /// <tt>std::pair<GR::Arc,X></tt> or
268
  /// <tt>std::pair<GR::Edge,X></tt> as its <tt>value_type</tt>, where
269
  /// \c X is the type of the costs. The pairs indicates the arcs/edges
267
  /// <tt>std::pair<GR::Arc,C></tt> or
268
  /// <tt>std::pair<GR::Edge,C></tt> as its <tt>value_type</tt>, where
269
  /// \c C is the type of the costs. The pairs indicates the arcs/edges
270 270
  /// along with the assigned cost. <em>They must be in a
271 271
  /// cost-ascending order.</em>
... ...
@@ -274,6 +274,6 @@
274 274
  ///
275 275
  /// \retval out Here we also have a choice.
276
  /// - It can be a writable \c bool arc/edge map. After running the
277
  /// algorithm it will contain the found minimum cost spanning
276
  /// - It can be a writable arc/edge map with \c bool value type. After
277
  /// running the algorithm it will contain the found minimum cost spanning
278 278
  /// tree: the value of an arc/edge will be set to \c true if it belongs
279 279
  /// to the tree, otherwise it will be set to \c false. The value of
... ...
@@ -302,6 +302,6 @@
302 302

	
303 303
#ifdef DOXYGEN
304
  template <class Graph, class In, class Out>
305
  Value kruskal(GR const& g, const In& in, Out& out)
304
  template <typename Graph, typename In, typename Out>
305
  Value kruskal(const Graph& g, const In& in, Out& out)
306 306
#else
307 307
  template <class Graph, class In, class Out>
... ...
@@ -315,6 +315,4 @@
315 315

	
316 316

	
317

	
318

	
319 317
  template <class Graph, class In, class Out>
320 318
  inline typename _kruskal_bits::KruskalValueSelector<In>::Value
Ignore white space 6 line context
... ...
@@ -594,5 +594,5 @@
594 594
  public:
595 595

	
596
    /// \name Reading rules
596
    /// \name Reading Rules
597 597
    /// @{
598 598

	
... ...
@@ -699,5 +699,5 @@
699 699
    /// @}
700 700

	
701
    /// \name Select section by name
701
    /// \name Select Section by Name
702 702
    /// @{
703 703

	
... ...
@@ -728,5 +728,5 @@
728 728
    /// @}
729 729

	
730
    /// \name Using previously constructed node or arc set
730
    /// \name Using Previously Constructed Node or Arc Set
731 731
    /// @{
732 732

	
... ...
@@ -1117,5 +1117,5 @@
1117 1117
  public:
1118 1118

	
1119
    /// \name Execution of the reader
1119
    /// \name Execution of the Reader
1120 1120
    /// @{
1121 1121

	
... ...
@@ -1390,5 +1390,5 @@
1390 1390
  public:
1391 1391

	
1392
    /// \name Reading rules
1392
    /// \name Reading Rules
1393 1393
    /// @{
1394 1394

	
... ...
@@ -1541,5 +1541,5 @@
1541 1541
    /// @}
1542 1542

	
1543
    /// \name Select section by name
1543
    /// \name Select Section by Name
1544 1544
    /// @{
1545 1545

	
... ...
@@ -1570,5 +1570,5 @@
1570 1570
    /// @}
1571 1571

	
1572
    /// \name Using previously constructed node or edge set
1572
    /// \name Using Previously Constructed Node or Edge Set
1573 1573
    /// @{
1574 1574

	
... ...
@@ -1960,5 +1960,5 @@
1960 1960
  public:
1961 1961

	
1962
    /// \name Execution of the reader
1962
    /// \name Execution of the Reader
1963 1963
    /// @{
1964 1964

	
... ...
@@ -2159,5 +2159,5 @@
2159 2159
  public:
2160 2160

	
2161
    /// \name Section readers
2161
    /// \name Section Readers
2162 2162
    /// @{
2163 2163

	
... ...
@@ -2258,5 +2258,5 @@
2258 2258

	
2259 2259

	
2260
    /// \name Execution of the reader
2260
    /// \name Execution of the Reader
2261 2261
    /// @{
2262 2262

	
... ...
@@ -2440,5 +2440,5 @@
2440 2440

	
2441 2441

	
2442
    /// \name Node sections
2442
    /// \name Node Sections
2443 2443
    /// @{
2444 2444

	
... ...
@@ -2466,5 +2466,5 @@
2466 2466
    /// @}
2467 2467

	
2468
    /// \name Arc/Edge sections
2468
    /// \name Arc/Edge Sections
2469 2469
    /// @{
2470 2470

	
... ...
@@ -2524,5 +2524,5 @@
2524 2524
    /// @}
2525 2525

	
2526
    /// \name Attribute sections
2526
    /// \name Attribute Sections
2527 2527
    /// @{
2528 2528

	
... ...
@@ -2550,5 +2550,5 @@
2550 2550
    /// @}
2551 2551

	
2552
    /// \name Extra sections
2552
    /// \name Extra Sections
2553 2553
    /// @{
2554 2554

	
... ...
@@ -2626,5 +2626,5 @@
2626 2626
  public:
2627 2627

	
2628
    /// \name Execution of the contents reader
2628
    /// \name Execution of the Contents Reader
2629 2629
    /// @{
2630 2630

	
Ignore white space 6 line context
... ...
@@ -539,5 +539,5 @@
539 539
  public:
540 540

	
541
    /// \name Writing rules
541
    /// \name Writing Rules
542 542
    /// @{
543 543

	
... ...
@@ -642,5 +642,5 @@
642 642
    }
643 643

	
644
    /// \name Section captions
644
    /// \name Section Captions
645 645
    /// @{
646 646

	
... ...
@@ -669,5 +669,5 @@
669 669
    }
670 670

	
671
    /// \name Skipping section
671
    /// \name Skipping Section
672 672
    /// @{
673 673

	
... ...
@@ -886,5 +886,5 @@
886 886
  public:
887 887

	
888
    /// \name Execution of the writer
888
    /// \name Execution of the Writer
889 889
    /// @{
890 890

	
... ...
@@ -1107,5 +1107,5 @@
1107 1107
  public:
1108 1108

	
1109
    /// \name Writing rules
1109
    /// \name Writing Rules
1110 1110
    /// @{
1111 1111

	
... ...
@@ -1256,5 +1256,5 @@
1256 1256
    }
1257 1257

	
1258
    /// \name Section captions
1258
    /// \name Section Captions
1259 1259
    /// @{
1260 1260

	
... ...
@@ -1283,5 +1283,5 @@
1283 1283
    }
1284 1284

	
1285
    /// \name Skipping section
1285
    /// \name Skipping Section
1286 1286
    /// @{
1287 1287

	
... ...
@@ -1500,5 +1500,5 @@
1500 1500
  public:
1501 1501

	
1502
    /// \name Execution of the writer
1502
    /// \name Execution of the Writer
1503 1503
    /// @{
1504 1504

	
... ...
@@ -1652,5 +1652,5 @@
1652 1652
  public:
1653 1653

	
1654
    /// \name Section writers
1654
    /// \name Section Writers
1655 1655
    /// @{
1656 1656

	
... ...
@@ -1719,5 +1719,5 @@
1719 1719

	
1720 1720

	
1721
    /// \name Execution of the writer
1721
    /// \name Execution of the Writer
1722 1722
    /// @{
1723 1723

	
Ignore white space 6 line context
... ...
@@ -53,10 +53,10 @@
53 53
    ///Possible outcomes of an LP solving procedure
54 54
    enum SolveExitStatus {
55
      ///This means that the problem has been successfully solved: either
55
      /// = 0. It means that the problem has been successfully solved: either
56 56
      ///an optimal solution has been found or infeasibility/unboundedness
57 57
      ///has been proved.
58 58
      SOLVED = 0,
59
      ///Any other case (including the case when some user specified
60
      ///limit has been exceeded)
59
      /// = 1. Any other case (including the case when some user specified
60
      ///limit has been exceeded).
61 61
      UNSOLVED = 1
62 62
    };
... ...
@@ -72,13 +72,13 @@
72 72
    ///Enum for \c messageLevel() parameter
73 73
    enum MessageLevel {
74
      /// no output (default value)
74
      /// No output (default value).
75 75
      MESSAGE_NOTHING,
76
      /// error messages only
76
      /// Error messages only.
77 77
      MESSAGE_ERROR,
78
      /// warnings
78
      /// Warnings.
79 79
      MESSAGE_WARNING,
80
      /// normal output
80
      /// Normal output.
81 81
      MESSAGE_NORMAL,
82
      /// verbose output
82
      /// Verbose output.
83 83
      MESSAGE_VERBOSE
84 84
    };
... ...
@@ -1006,5 +1006,5 @@
1006 1006
    const char* solverName() const {return _solverName();}
1007 1007

	
1008
    ///\name Build up and modify the LP
1008
    ///\name Build Up and Modify the LP
1009 1009

	
1010 1010
    ///@{
... ...
@@ -1789,13 +1789,13 @@
1789 1789
    /// The problem types for primal and dual problems
1790 1790
    enum ProblemType {
1791
      ///Feasible solution hasn't been found (but may exist).
1791
      /// = 0. Feasible solution hasn't been found (but may exist).
1792 1792
      UNDEFINED = 0,
1793
      ///The problem has no feasible solution
1793
      /// = 1. The problem has no feasible solution.
1794 1794
      INFEASIBLE = 1,
1795
      ///Feasible solution found
1795
      /// = 2. Feasible solution found.
1796 1796
      FEASIBLE = 2,
1797
      ///Optimal solution exists and found
1797
      /// = 3. Optimal solution exists and found.
1798 1798
      OPTIMAL = 3,
1799
      ///The cost function is unbounded
1799
      /// = 4. The cost function is unbounded.
1800 1800
      UNBOUNDED = 4
1801 1801
    };
... ...
@@ -1853,5 +1853,5 @@
1853 1853
    ///@}
1854 1854

	
1855
    ///\name Obtain the solution
1855
    ///\name Obtain the Solution
1856 1856

	
1857 1857
    ///@{
... ...
@@ -1975,15 +1975,14 @@
1975 1975
    /// The problem types for MIP problems
1976 1976
    enum ProblemType {
1977
      ///Feasible solution hasn't been found (but may exist).
1977
      /// = 0. Feasible solution hasn't been found (but may exist).
1978 1978
      UNDEFINED = 0,
1979
      ///The problem has no feasible solution
1979
      /// = 1. The problem has no feasible solution.
1980 1980
      INFEASIBLE = 1,
1981
      ///Feasible solution found
1981
      /// = 2. Feasible solution found.
1982 1982
      FEASIBLE = 2,
1983
      ///Optimal solution exists and found
1983
      /// = 3. Optimal solution exists and found.
1984 1984
      OPTIMAL = 3,
1985
      ///The cost function is unbounded
1986
      ///
1987
      ///The Mip or at least the relaxed problem is unbounded
1985
      /// = 4. The cost function is unbounded.
1986
      ///The Mip or at least the relaxed problem is unbounded.
1988 1987
      UNBOUNDED = 4
1989 1988
    };
... ...
@@ -2007,12 +2006,12 @@
2007 2006
    ///@}
2008 2007

	
2009
    ///\name Setting column type
2008
    ///\name Set Column Type
2010 2009
    ///@{
2011 2010

	
2012 2011
    ///Possible variable (column) types (e.g. real, integer, binary etc.)
2013 2012
    enum ColTypes {
2014
      ///Continuous variable (default)
2013
      /// = 0. Continuous variable (default).
2015 2014
      REAL = 0,
2016
      ///Integer variable
2015
      /// = 1. Integer variable.
2017 2016
      INTEGER = 1
2018 2017
    };
... ...
@@ -2035,5 +2034,5 @@
2035 2034
    ///@}
2036 2035

	
2037
    ///\name Obtain the solution
2036
    ///\name Obtain the Solution
2038 2037

	
2039 2038
    ///@{
Ignore white space 6 line context
... ...
@@ -2729,6 +2729,6 @@
2729 2729
  /// \brief Potential difference map
2730 2730
  ///
2731
  /// PotentialMap returns the difference between the potentials of the
2732
  /// source and target nodes of each arc in a digraph, i.e. it returns
2731
  /// PotentialDifferenceMap returns the difference between the potentials of
2732
  /// the source and target nodes of each arc in a digraph, i.e. it returns
2733 2733
  /// \code
2734 2734
  ///   potential[gr.target(arc)] - potential[gr.source(arc)].
Ignore white space 6 line context
... ...
@@ -91,8 +91,8 @@
91 91
  /// \ingroup spantree
92 92
  ///
93
  /// \brief %MinCostArborescence algorithm class.
93
  /// \brief Minimum Cost Arborescence algorithm class.
94 94
  ///
95 95
  /// This class provides an efficient implementation of
96
  /// %MinCostArborescence algorithm. The arborescence is a tree
96
  /// Minimum Cost Arborescence algorithm. The arborescence is a tree
97 97
  /// which is directed from a given source node of the digraph. One or
98 98
  /// more sources should be given for the algorithm and it will calculate
... ...
@@ -391,5 +391,5 @@
391 391
  public:
392 392

	
393
    /// \name Named template parameters
393
    /// \name Named Template Parameters
394 394

	
395 395
    /// @{
... ...
@@ -631,5 +631,5 @@
631 631
    /// @}
632 632

	
633
    /// \name Execution control
633
    /// \name Execution Control
634 634
    /// The simplest way to execute the algorithm is to use
635 635
    /// one of the member functions called \c run(...). \n
Ignore white space 6 line context
... ...
@@ -660,5 +660,5 @@
660 660
    /// @}
661 661

	
662
    ///\name Uniform distributions
662
    ///\name Uniform Distributions
663 663
    ///
664 664
    /// @{
... ...
@@ -763,5 +763,5 @@
763 763
    /// @}
764 764

	
765
    ///\name Non-uniform distributions
765
    ///\name Non-uniform Distributions
766 766
    ///
767 767
    ///@{
... ...
@@ -939,5 +939,5 @@
939 939
    ///@}
940 940

	
941
    ///\name Two dimensional distributions
941
    ///\name Two Dimensional Distributions
942 942
    ///
943 943
    ///@{
Ignore white space 6 line context
... ...
@@ -289,5 +289,5 @@
289 289
    }
290 290

	
291
    /// \name Execution control
291
    /// \name Execution Control
292 292
    /// The simplest way to execute the algorithm is to call the run()
293 293
    /// function.
Ignore white space 6 line context
... ...
@@ -288,5 +288,5 @@
288 288
    Timer(bool run=true) :_running(run) {_reset();}
289 289

	
290
    ///\name Control the state of the timer
290
    ///\name Control the State of the Timer
291 291
    ///Basically a Timer can be either running or stopped,
292 292
    ///but it provides a bit finer control on the execution.
... ...
@@ -396,5 +396,5 @@
396 396
    ///@}
397 397

	
398
    ///\name Query Functions for the ellapsed time
398
    ///\name Query Functions for the Ellapsed Time
399 399

	
400 400
    ///@{
Ignore white space 6 line context
... ...
@@ -24,9 +24,8 @@
24 24
///
25 25
/// See
26
/// \verbatim
27
///  dimacs-solver --help
28
/// \endverbatim
26
/// \code
27
///   dimacs-solver --help
28
/// \endcode
29 29
/// for more info on usage.
30
///
31 30

	
32 31
#include <iostream>
Ignore white space 6 line context
... ...
@@ -25,9 +25,8 @@
25 25
///
26 26
/// See
27
/// \verbatim
28
///  dimacs-to-lgf --help
29
/// \endverbatim
30
/// for more info on usage.
31
///
27
/// \code
28
///   dimacs-to-lgf --help
29
/// \endcode
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/// for more info on the usage.
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#include <iostream>
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///
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/// See
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/// \verbatim
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///  lgf-gen --help
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/// \endverbatim
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/// \code
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///   lgf-gen --help
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/// \endcode
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/// for more info on the usage.
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///
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#include <algorithm>
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