LEMON/LEMON-official Changeset - r607:49a39bae067c

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Changeset - r607:49a39bae067c

« 605:f53d64
« 606:c5fd2d

608:6e0525 »

r607:49a39bae067c

Sun, 29 Mar 2009 23:19:14

[Not Reviewed]

0 comments (0 inline)

alpar (Alpar Juttner)
alpar@cs.elte.hu

Merge

0 18 0

merge default

0 files changed with 207 insertions and 159 deletions:

CMakeLists.txt

LICENSE

NEWS

demo/CMakeLists.txt

doc/CMakeLists.txt

lemon/CMakeLists.txt

lemon/Makefile.am

lemon/cplex.cc

lemon/cplex.h

lemon/glpk.cc

scripts/unify-sources.sh

test/CMakeLists.txt

test/counter_test.cc

test/lp_test.cc

test/mip_test.cc

test/time_measure_test.cc

tools/CMakeLists.txt

tools/lemon-0.x-to-1.x.sh

↑ Collapse diff ↑

0 comments (0 inline)

@@ -6,13 +6,13 @@
 		  SET(PROJECT_NAME "LEMON")
 		  SET(PROJECT_VERSION "hg-tip" CACHE STRING "LEMON version string.")
 		ENDIF(EXISTS ${CMAKE_SOURCE_DIR}/cmake/version.cmake)
 		PROJECT(${PROJECT_NAME})
-		SET(CMAKE_MODULE_PATH ${CMAKE_SOURCE_DIR}/cmake)
+		SET(CMAKE_MODULE_PATH ${PROJECT_SOURCE_DIR}/cmake)
 		INCLUDE(FindDoxygen)
 		INCLUDE(FindGhostscript)
 		FIND_PACKAGE(GLPK 4.33)
 		ADD_DEFINITIONS(-DHAVE_CONFIG_H)
@@ -35,77 +35,81 @@
 		INCLUDE(CheckTypeSize)
 		CHECK_TYPE_SIZE("long long" LONG_LONG)
 		ENABLE_TESTING()
 		ADD_SUBDIRECTORY(lemon)
 		ADD_SUBDIRECTORY(demo)
 		ADD_SUBDIRECTORY(tools)
 		ADD_SUBDIRECTORY(doc)
 		ADD_SUBDIRECTORY(test)
 		IF(${CMAKE_SOURCE_DIR} STREQUAL ${PROJECT_SOURCE_DIR})
 		  ADD_SUBDIRECTORY(demo)
 		  ADD_SUBDIRECTORY(tools)
 		  ADD_SUBDIRECTORY(doc)
 		  ADD_SUBDIRECTORY(test)
 		ENDIF(${CMAKE_SOURCE_DIR} STREQUAL ${PROJECT_SOURCE_DIR})
 		IF(WIN32)
 		  SET(CPACK_PACKAGE_NAME ${PROJECT_NAME})
 		  SET(CPACK_PACKAGE_VENDOR "EGRES")
 		  SET(CPACK_PACKAGE_DESCRIPTION_SUMMARY
 		    "LEMON - Library of Efficient Models and Optimization in Networks")
 		  SET(CPACK_RESOURCE_FILE_LICENSE "${CMAKE_SOURCE_DIR}/LICENSE")
 		IF(${CMAKE_SOURCE_DIR} STREQUAL ${PROJECT_SOURCE_DIR})
 		  IF(WIN32)
 		    SET(CPACK_PACKAGE_NAME ${PROJECT_NAME})
 		    SET(CPACK_PACKAGE_VENDOR "EGRES")
 		    SET(CPACK_PACKAGE_DESCRIPTION_SUMMARY
 		      "LEMON - Library of Efficient Models and Optimization in Networks")
 		    SET(CPACK_RESOURCE_FILE_LICENSE "${PROJECT_SOURCE_DIR}/LICENSE")
 		  SET(CPACK_PACKAGE_VERSION ${PROJECT_VERSION})
+		    SET(CPACK_PACKAGE_VERSION ${PROJECT_VERSION})
 		  SET(CPACK_PACKAGE_INSTALL_DIRECTORY
 		    "${PROJECT_NAME} ${PROJECT_VERSION}")
 		  SET(CPACK_PACKAGE_INSTALL_REGISTRY_KEY
 		    "${PROJECT_NAME} ${PROJECT_VERSION}")
 		    SET(CPACK_PACKAGE_INSTALL_DIRECTORY
 		      "${PROJECT_NAME} ${PROJECT_VERSION}")
 		    SET(CPACK_PACKAGE_INSTALL_REGISTRY_KEY
 		      "${PROJECT_NAME} ${PROJECT_VERSION}")
 		  SET(CPACK_COMPONENTS_ALL headers library html_documentation bin)
+		    SET(CPACK_COMPONENTS_ALL headers library html_documentation bin)
 		  SET(CPACK_COMPONENT_HEADERS_DISPLAY_NAME "C++ headers")
 		  SET(CPACK_COMPONENT_LIBRARY_DISPLAY_NAME "Dynamic-link library")
 		  SET(CPACK_COMPONENT_BIN_DISPLAY_NAME "Command line utilities")
 		  SET(CPACK_COMPONENT_HTML_DOCUMENTATION_DISPLAY_NAME "HTML documentation")
 		    SET(CPACK_COMPONENT_HEADERS_DISPLAY_NAME "C++ headers")
 		    SET(CPACK_COMPONENT_LIBRARY_DISPLAY_NAME "Dynamic-link library")
 		    SET(CPACK_COMPONENT_BIN_DISPLAY_NAME "Command line utilities")
 		    SET(CPACK_COMPONENT_HTML_DOCUMENTATION_DISPLAY_NAME "HTML documentation")
 		  SET(CPACK_COMPONENT_HEADERS_DESCRIPTION
 		    "C++ header files")
 		  SET(CPACK_COMPONENT_LIBRARY_DESCRIPTION
 		    "DLL and import library")
 		  SET(CPACK_COMPONENT_BIN_DESCRIPTION
 		    "Command line utilities")
 		  SET(CPACK_COMPONENT_HTML_DOCUMENTATION_DESCRIPTION
 		    "Doxygen generated documentation")
 		    SET(CPACK_COMPONENT_HEADERS_DESCRIPTION
 		      "C++ header files")
 		    SET(CPACK_COMPONENT_LIBRARY_DESCRIPTION
 		      "DLL and import library")
 		    SET(CPACK_COMPONENT_BIN_DESCRIPTION
 		      "Command line utilities")
 		    SET(CPACK_COMPONENT_HTML_DOCUMENTATION_DESCRIPTION
 		      "Doxygen generated documentation")
 		  SET(CPACK_COMPONENT_HEADERS_DEPENDS library)
+		    SET(CPACK_COMPONENT_HEADERS_DEPENDS library)
 		  SET(CPACK_COMPONENT_HEADERS_GROUP "Development")
 		  SET(CPACK_COMPONENT_LIBRARY_GROUP "Development")
-		  SET(CPACK_COMPONENT_HTML_DOCUMENTATION_GROUP "Documentation")
+		    SET(CPACK_COMPONENT_HEADERS_GROUP "Development")
 		    SET(CPACK_COMPONENT_LIBRARY_GROUP "Development")
 		    SET(CPACK_COMPONENT_HTML_DOCUMENTATION_GROUP "Documentation")
 		  SET(CPACK_COMPONENT_GROUP_DEVELOPMENT_DESCRIPTION
 		    "Components needed to develop software using LEMON")
 		  SET(CPACK_COMPONENT_GROUP_DOCUMENTATION_DESCRIPTION
 		    "Documentation of LEMON")
 		    SET(CPACK_COMPONENT_GROUP_DEVELOPMENT_DESCRIPTION
 		      "Components needed to develop software using LEMON")
 		    SET(CPACK_COMPONENT_GROUP_DOCUMENTATION_DESCRIPTION
 		      "Documentation of LEMON")
 		  SET(CPACK_ALL_INSTALL_TYPES Full Developer)
+		    SET(CPACK_ALL_INSTALL_TYPES Full Developer)
 		  SET(CPACK_COMPONENT_HEADERS_INSTALL_TYPES Developer Full)
 		  SET(CPACK_COMPONENT_LIBRARY_INSTALL_TYPES Developer Full)
-		  SET(CPACK_COMPONENT_HTML_DOCUMENTATION_INSTALL_TYPES Full)
+		    SET(CPACK_COMPONENT_HEADERS_INSTALL_TYPES Developer Full)
 		    SET(CPACK_COMPONENT_LIBRARY_INSTALL_TYPES Developer Full)
 		    SET(CPACK_COMPONENT_HTML_DOCUMENTATION_INSTALL_TYPES Full)
 		  SET(CPACK_GENERATOR "NSIS")
 		  SET(CPACK_NSIS_MUI_ICON "${CMAKE_SOURCE_DIR}/cmake/nsis/lemon.ico")
 		  SET(CPACK_NSIS_MUI_UNIICON "${CMAKE_SOURCE_DIR}/cmake/nsis/uninstall.ico")
 		  #SET(CPACK_PACKAGE_ICON "${CMAKE_SOURCE_DIR}/cmake/nsis\\\\installer.bmp")
 		  SET(CPACK_NSIS_INSTALLED_ICON_NAME "bin\\\\lemon.ico")
 		  SET(CPACK_NSIS_DISPLAY_NAME "${CPACK_PACKAGE_INSTALL_DIRECTORY} ${PROJECT_NAME}")
 		  SET(CPACK_NSIS_HELP_LINK "http:\\\\\\\\lemon.cs.elte.hu")
 		  SET(CPACK_NSIS_URL_INFO_ABOUT "http:\\\\\\\\lemon.cs.elte.hu")
 		  SET(CPACK_NSIS_CONTACT "lemon-user@lemon.cs.elte.hu")
 		  SET(CPACK_NSIS_CREATE_ICONS_EXTRA "
 		    CreateShortCut \\\"$SMPROGRAMS\\\\$STARTMENU_FOLDER\\\\Documentation.lnk\\\" \\\"$INSTDIR\\\\share\\\\doc\\\\index.html\\\"
 		    ")
 		  SET(CPACK_NSIS_DELETE_ICONS_EXTRA "
 		    !insertmacro MUI_STARTMENU_GETFOLDER Application $MUI_TEMP
 		    Delete \\\"$SMPROGRAMS\\\\$MUI_TEMP\\\\Documentation.lnk\\\"
 		    ")
 		    SET(CPACK_GENERATOR "NSIS")
 		    SET(CPACK_NSIS_MUI_ICON "${PROJECT_SOURCE_DIR}/cmake/nsis/lemon.ico")
 		    SET(CPACK_NSIS_MUI_UNIICON "${PROJECT_SOURCE_DIR}/cmake/nsis/uninstall.ico")
 		    #SET(CPACK_PACKAGE_ICON "${PROJECT_SOURCE_DIR}/cmake/nsis\\\\installer.bmp")
 		    SET(CPACK_NSIS_INSTALLED_ICON_NAME "bin\\\\lemon.ico")
 		    SET(CPACK_NSIS_DISPLAY_NAME "${CPACK_PACKAGE_INSTALL_DIRECTORY} ${PROJECT_NAME}")
 		    SET(CPACK_NSIS_HELP_LINK "http:\\\\\\\\lemon.cs.elte.hu")
 		    SET(CPACK_NSIS_URL_INFO_ABOUT "http:\\\\\\\\lemon.cs.elte.hu")
 		    SET(CPACK_NSIS_CONTACT "lemon-user@lemon.cs.elte.hu")
 		    SET(CPACK_NSIS_CREATE_ICONS_EXTRA "
 		      CreateShortCut \\\"$SMPROGRAMS\\\\$STARTMENU_FOLDER\\\\Documentation.lnk\\\" \\\"$INSTDIR\\\\share\\\\doc\\\\index.html\\\"
 		      ")
 		    SET(CPACK_NSIS_DELETE_ICONS_EXTRA "
 		      !insertmacro MUI_STARTMENU_GETFOLDER Application $MUI_TEMP
 		      Delete \\\"$SMPROGRAMS\\\\$MUI_TEMP\\\\Documentation.lnk\\\"
 		      ")
 		  INCLUDE(CPack)
 		ENDIF(WIN32)
 		    INCLUDE(CPack)
 		  ENDIF(WIN32)
 		ENDIF(${CMAKE_SOURCE_DIR} STREQUAL ${PROJECT_SOURCE_DIR})

 		LEMON code without an explicit copyright is covered by the following
+		LEMON code without an explicit copyright notice is covered by the following
 		copyright/license.
 		Copyright (C) 2003-2009 Egervary Jeno Kombinatorikus Optimalizalasi
 		Kutatocsoport (Egervary Combinatorial Optimization Research Group,
 		EGRES).
 		===========================================================================
 		Boost Software License, Version 1.0
 		===========================================================================
 		Permission is hereby granted, free of charge, to any person or organization
 		obtaining a copy of the software and accompanying documentation covered by
 		this license (the "Software") to use, reproduce, display, distribute,
 		execute, and transmit the Software, and to prepare derivative works of the
 		Software, and to permit third-parties to whom the Software is furnished to
 		do so, all subject to the following:
@@ -23,11 +27,6 @@
 		IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
 		FITNESS FOR A PARTICULAR PURPOSE, TITLE AND NON-INFRINGEMENT. IN NO EVENT
 		SHALL THE COPYRIGHT HOLDERS OR ANYONE DISTRIBUTING THE SOFTWARE BE LIABLE
 		FOR ANY DAMAGES OR OTHER LIABILITY, WHETHER IN CONTRACT, TORT OR OTHERWISE,
 		ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
 		DEALINGS IN THE SOFTWARE.
 		===========================================================================
 		This license is a verbatim copy of the Boost Software License, Version 1.0.

 -03-27 LEMON joins to the COIN-OR initiative
 		        COIN-OR (Computational Infrastructure for Operations Research,
 		        http://www.coin-or.org) project is an initiative to spur the
 		        development of open-source software for the operations research
 		        community.
 -10-13 Version 1.0 released
 			This is the first stable release of LEMON. Compared to the 0.x
 			release series, it features a considerably smaller but more
 			matured set of tools. The API has also completely revised and
 			changed in several places.

 		INCLUDE_DIRECTORIES(
 		  ${CMAKE_SOURCE_DIR}
 		  ${CMAKE_BINARY_DIR}
 		  ${PROJECT_SOURCE_DIR}
 		  ${PROJECT_BINARY_DIR}
+		)
-		LINK_DIRECTORIES(${CMAKE_BINARY_DIR}/lemon)
+		LINK_DIRECTORIES(${PROJECT_BINARY_DIR}/lemon)
 		SET(DEMOS
 		  arg_parser_demo
 		  graph_to_eps_demo
 		  lgf_demo)

 		SET(PACKAGE_NAME ${PROJECT_NAME})
 		SET(PACKAGE_VERSION ${PROJECT_VERSION})
 		SET(abs_top_srcdir ${CMAKE_SOURCE_DIR})
 		SET(abs_top_builddir ${CMAKE_BINARY_DIR})
 		SET(abs_top_srcdir ${PROJECT_SOURCE_DIR})
 		SET(abs_top_builddir ${PROJECT_BINARY_DIR})
 		CONFIGURE_FILE(
 		  ${CMAKE_SOURCE_DIR}/doc/Doxyfile.in
 		  ${CMAKE_BINARY_DIR}/doc/Doxyfile
 		  ${PROJECT_SOURCE_DIR}/doc/Doxyfile.in
 		  ${PROJECT_BINARY_DIR}/doc/Doxyfile
 		  @ONLY)
 		IF(DOXYGEN_EXECUTABLE AND GHOSTSCRIPT_EXECUTABLE)
 		  FILE(MAKE_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/html/)
 		  IF(UNIX)
 		    ADD_CUSTOM_TARGET(html

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@@ -14,12 +14,13 @@
 			lemon/lp_skeleton.cc \
 		        lemon/random.cc \
 			lemon/bits/windows.cc
 		lemon_libemon_la_CXXFLAGS = \
 			$(AM_CXXFLAGS) \
 			$(GLPK_CFLAGS) \
 			$(CPLEX_CFLAGS) \
 			$(SOPLEX_CXXFLAGS) \
 			$(CLP_CXXFLAGS)
 		lemon_libemon_la_LDFLAGS = \

 		/* -*- mode: C++; indent-tabs-mode: nil; -*-
+		 *
 		 * This file is a part of LEMON, a generic C++ optimization library.
+		 *
-		 * Copyright (C) 2003-2008
+		 * Copyright (C) 2003-2009
 		 * Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
 		 * (Egervary Research Group on Combinatorial Optimization, EGRES).
+		 *
 		 * Permission to use, modify and distribute this software is granted
 		 * provided that this copyright notice appears in all copies. For
 		 * precise terms see the accompanying LICENSE file.
@@ -438,19 +438,19 @@
 		    cols.clear();
+		  }
 		  // CplexLp members
 		  CplexLp::CplexLp()
-		    : LpBase(), CplexBase(), LpSolver() {}
+		    : LpBase(), LpSolver(), CplexBase() {}
 		  CplexLp::CplexLp(const CplexEnv& env)
-		    : LpBase(), CplexBase(env), LpSolver() {}
+		    : LpBase(), LpSolver(), CplexBase(env) {}
 		  CplexLp::CplexLp(const CplexLp& other)
-		    : LpBase(), CplexBase(other), LpSolver() {}
+		    : LpBase(), LpSolver(), CplexBase(other) {}
 		  CplexLp::~CplexLp() {}
 		  CplexLp* CplexLp::newSolver() const { return new CplexLp; }
 		  CplexLp* CplexLp::cloneSolver() const {return new CplexLp(*this); }
@@ -795,34 +795,34 @@
 		#endif
+		  }
 		  // CplexMip members
 		  CplexMip::CplexMip()
-		    : LpBase(), CplexBase(), MipSolver() {
+		    : LpBase(), MipSolver(), CplexBase() {
 		#if CPX_VERSION < 800
 		    CPXchgprobtype(cplexEnv(),  _prob, CPXPROB_MIP);
 		#else
 		    CPXchgprobtype(cplexEnv(),  _prob, CPXPROB_MILP);
 		#endif
+		  }
 		  CplexMip::CplexMip(const CplexEnv& env)
-		    : LpBase(), CplexBase(env), MipSolver() {
+		    : LpBase(), MipSolver(), CplexBase(env) {
 		#if CPX_VERSION < 800
 		    CPXchgprobtype(cplexEnv(),  _prob, CPXPROB_MIP);
 		#else
 		    CPXchgprobtype(cplexEnv(),  _prob, CPXPROB_MILP);
 		#endif
+		  }
 		  CplexMip::CplexMip(const CplexMip& other)
-		    : LpBase(), CplexBase(other), MipSolver() {}
+		    : LpBase(), MipSolver(), CplexBase(other) {}
 		  CplexMip::~CplexMip() {}
 		  CplexMip* CplexMip::newSolver() const { return new CplexMip; }
 		  CplexMip* CplexMip::cloneSolver() const {return new CplexMip(*this); }

 		/* -*- mode: C++; indent-tabs-mode: nil; -*-
+		 *
 		 * This file is a part of LEMON, a generic C++ optimization library.
+		 *
-		 * Copyright (C) 2003-2008
+		 * Copyright (C) 2003-2009
 		 * Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
 		 * (Egervary Research Group on Combinatorial Optimization, EGRES).
+		 *
 		 * Permission to use, modify and distribute this software is granted
 		 * provided that this copyright notice appears in all copies. For
 		 * precise terms see the accompanying LICENSE file.
@@ -75,13 +75,13 @@
 		    const cpxenv* cplexEnv() const { return _env; }
 		  };
 		  /// \brief Base interface for the CPLEX LP and MIP solver
 		  ///
 		  /// This class implements the common interface of the CPLEX LP and
-		  /// MIP solvers.
 		  /// MIP solvers.
 		  /// \ingroup lp_group
 		  class CplexBase : virtual public LpBase {
 		  protected:
 		    CplexEnv _env;
 		    cpxlp* _prob;
@@ -232,16 +232,19 @@
 		    CplexMip(const CplexEnv&);
 		    /// \e
 		    CplexMip(const CplexMip&);
 		    /// \e
 		    virtual ~CplexMip();
 		    /// \e
 		    virtual CplexMip* cloneSolver() const;
 		    /// \e
 		    virtual CplexMip* newSolver() const;
 		  protected:
 		    virtual CplexMip* _cloneSolver() const;
 		    virtual CplexMip* _newSolver() const;
 		    virtual const char* _solverName() const;
 		    virtual ColTypes _getColType(int col) const;
 		    virtual void _setColType(int col, ColTypes col_type);

 		/* -*- mode: C++; indent-tabs-mode: nil; -*-
+		 *
 		 * This file is a part of LEMON, a generic C++ optimization library.
+		 *
-		 * Copyright (C) 2003-2008
+		 * Copyright (C) 2003-2009
 		 * Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
 		 * (Egervary Research Group on Combinatorial Optimization, EGRES).
+		 *
 		 * Permission to use, modify and distribute this software is granted
 		 * provided that this copyright notice appears in all copies. For
 		 * precise terms see the accompanying LICENSE file.
@@ -528,18 +528,18 @@
 		  GlpkBase::FreeEnvHelper GlpkBase::freeEnvHelper;
 		  // GlpkLp members
 		  GlpkLp::GlpkLp()
-		    : LpBase(), GlpkBase(), LpSolver() {
+		    : LpBase(), LpSolver(), GlpkBase() {
 		    messageLevel(MESSAGE_NO_OUTPUT);
+		  }
 		  GlpkLp::GlpkLp(const GlpkLp& other)
-		    : LpBase(other), GlpkBase(other), LpSolver(other) {
+		    : LpBase(other), LpSolver(other), GlpkBase(other) {
 		    messageLevel(MESSAGE_NO_OUTPUT);
+		  }
 		  GlpkLp* GlpkLp::newSolver() const { return new GlpkLp; }
 		  GlpkLp* GlpkLp::cloneSolver() const { return new GlpkLp(*this); }
@@ -827,18 +827,18 @@
 		    _message_level = m;
+		  }
 		  // GlpkMip members
 		  GlpkMip::GlpkMip()
-		    : LpBase(), GlpkBase(), MipSolver() {
+		    : LpBase(), MipSolver(), GlpkBase() {
 		    messageLevel(MESSAGE_NO_OUTPUT);
+		  }
 		  GlpkMip::GlpkMip(const GlpkMip& other)
-		    : LpBase(), GlpkBase(other), MipSolver() {
+		    : LpBase(), MipSolver(), GlpkBase(other) {
 		    messageLevel(MESSAGE_NO_OUTPUT);
+		  }
 		  void GlpkMip::_setColType(int i, GlpkMip::ColTypes col_type) {
 		    switch (col_type) {
 		    case INTEGER:

@@ -85,13 +85,18 @@
 		    fi
+		}
 		function check_action() {
 		    if [ "$3" == 'tabs' ]
 		    then
-		        PATTERN=$(echo -e '\t')
+		        if echo $2 | grep -q -v -E 'Makefile\.am$'
 		        then
 		            PATTERN=$(echo -e '\t')
 		        else
 		            PATTERN='        '
 		        fi
 		    elif [ "$3" == 'trailing spaces' ]
 		    then
 		        PATTERN='\ +$'
 		    else
 		        PATTERN='*'
 		    fi

 		INCLUDE_DIRECTORIES(
 		  ${CMAKE_SOURCE_DIR}
 		  ${CMAKE_BINARY_DIR}
 		  ${PROJECT_SOURCE_DIR}
 		  ${PROJECT_BINARY_DIR}
+		)
 		IF(HAVE_GLPK)
 		  INCLUDE_DIRECTORIES(${GLPK_INCLUDE_DIR})
 		ENDIF(HAVE_GLPK)
-		LINK_DIRECTORIES(${CMAKE_BINARY_DIR}/lemon)
+		LINK_DIRECTORIES(${PROJECT_BINARY_DIR}/lemon)
 		SET(TESTS
 		  adaptors_test
 		  bfs_test
 		  circulation_test
 		  counter_test

@@ -15,76 +15,103 @@
 		 * purpose.
+		 *
 		 */
 		#include <lemon/counter.h>
 		#include <vector>
 		#include <sstream>
 		#include "test/test_tools.h"
 		using namespace lemon;
 		template <typename T>
 		void bubbleSort(std::vector<T>& v) {
 		  Counter op("Bubble Sort - Operations: ");
 		  Counter::NoSubCounter as(op, "Assignments: ");
 		  Counter::NoSubCounter co(op, "Comparisons: ");
 		  for (int i = v.size()-1; i > 0; --i) {
 		    for (int j = 0; j < i; ++j) {
 		      if (v[j] > v[j+1]) {
 		        T tmp = v[j];
 		        v[j] = v[j+1];
 		        v[j+1] = tmp;
 		        as += 3;
 		  std::stringstream s1, s2, s3;
+		  {
 		    Counter op("Bubble Sort - Operations: ", s1);
 		    Counter::SubCounter as(op, "Assignments: ", s2);
 		    Counter::SubCounter co(op, "Comparisons: ", s3);
 		    for (int i = v.size()-1; i > 0; --i) {
 		      for (int j = 0; j < i; ++j) {
 		        if (v[j] > v[j+1]) {
 		          T tmp = v[j];
 		          v[j] = v[j+1];
 		          v[j+1] = tmp;
 		          as += 3;
+		        }
 		        ++co;
+		      }
 		      ++co;
+		    }
+		  }
 		  check(s1.str() == "Bubble Sort - Operations: 102\n", "Wrong counter");
 		  check(s2.str() == "Assignments: 57\n", "Wrong subcounter");
 		  check(s3.str() == "Comparisons: 45\n", "Wrong subcounter");
+		}
 		template <typename T>
 		void insertionSort(std::vector<T>& v) {
 		  Counter op("Insertion Sort - Operations: ");
 		  Counter::NoSubCounter as(op, "Assignments: ");
 		  Counter::NoSubCounter co(op, "Comparisons: ");
 		  for (int i = 1; i < int(v.size()); ++i) {
 		    T value = v[i];
 		    ++as;
 		    int j = i;
 		    while (j > 0 && v[j-1] > value) {
 		      v[j] = v[j-1];
 		      --j;
-		      ++co; ++as;
+		  std::stringstream s1, s2, s3;
+		  {
 		    Counter op("Insertion Sort - Operations: ", s1);
 		    Counter::SubCounter as(op, "Assignments: ", s2);
 		    Counter::SubCounter co(op, "Comparisons: ", s3);
 		    for (int i = 1; i < int(v.size()); ++i) {
 		      T value = v[i];
 		      ++as;
 		      int j = i;
 		      while (j > 0 && v[j-1] > value) {
 		        v[j] = v[j-1];
 		        --j;
 		        ++co; ++as;
+		      }
 		      v[j] = value;
 		      ++as;
+		    }
 		    v[j] = value;
 		    ++as;
+		  }
 		  check(s1.str() == "Insertion Sort - Operations: 56\n", "Wrong counter");
 		  check(s2.str() == "Assignments: 37\n", "Wrong subcounter");
 		  check(s3.str() == "Comparisons: 19\n", "Wrong subcounter");
+		}
 		template <typename MyCounter>
 		void counterTest() {
 		  MyCounter c("Main Counter: ");
 		  c++;
 		  typename MyCounter::SubCounter d(c, "SubCounter: ");
 		  d++;
 		  typename MyCounter::SubCounter::NoSubCounter e(d, "SubSubCounter: ");
 		  e++;
 		  d+=3;
 		  c-=4;
 		  e-=2;
 		  c.reset(2);
 		  c.reset();
 		void counterTest(bool output) {
 		  std::stringstream s1, s2, s3;
+		  {
 		    MyCounter c("Main Counter: ", s1);
 		    c++;
 		    typename MyCounter::SubCounter d(c, "SubCounter: ", s2);
 		    d++;
 		    typename MyCounter::SubCounter::NoSubCounter e(d, "SubSubCounter: ", s3);
 		    e++;
 		    d+=3;
 		    c-=4;
 		    e-=2;
 		    c.reset(2);
 		    c.reset();
+		  }
 		  if (output) {
 		    check(s1.str() == "Main Counter: 3\n", "Wrong Counter");
 		    check(s2.str() == "SubCounter: 3\n", "Wrong SubCounter");
 		    check(s3.str() == "", "Wrong NoSubCounter");
 		  } else {
 		    check(s1.str() == "", "Wrong NoCounter");
 		    check(s2.str() == "", "Wrong SubCounter");
 		    check(s3.str() == "", "Wrong NoSubCounter");
+		  }
+		}
 		void init(std::vector<int>& v) {
 		  v[0] = 10; v[1] = 60; v[2] = 20; v[3] = 90; v[4] = 100;
 		  v[5] = 80; v[6] = 40; v[7] = 30; v[8] = 50; v[9] = 70;
+		}
 		int main()
+		{
 		  counterTest<Counter>();
 		  counterTest<NoCounter>();
 		  counterTest<Counter>(true);
 		  counterTest<NoCounter>(false);
 		  std::vector<int> x(10);
 		  init(x); bubbleSort(x);
 		  init(x); insertionSort(x);
 		  return 0;

 		/* -*- mode: C++; indent-tabs-mode: nil; -*-
+		 *
 		 * This file is a part of LEMON, a generic C++ optimization library.
+		 *
-		 * Copyright (C) 2003-2008
+		 * Copyright (C) 2003-2009
 		 * Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
 		 * (Egervary Research Group on Combinatorial Optimization, EGRES).
+		 *
 		 * Permission to use, modify and distribute this software is granted
 		 * provided that this copyright notice appears in all copies. For
 		 * precise terms see the accompanying LICENSE file.
@@ -362,13 +362,13 @@
+		}
 		template<class LP>
 		void cloneTest()
+		{
 		  //Test for clone/new
 		  LP* lp = new LP();
 		  LP* lpnew = lp->newSolver();
 		  LP* lpclone = lp->cloneSolver();
 		  delete lp;
 		  delete lpnew;
 		  delete lpclone;
@@ -390,21 +390,21 @@
 		#ifdef HAVE_CPLEX
 		  try {
 		    CplexLp lp_cplex1,lp_cplex2;
 		    lpTest(lp_cplex1);
 		    aTest(lp_cplex2);
 		    cloneTest<CplexLp>();
 		  } catch (CplexEnv::LicenseError& error) {
 		#ifdef LEMON_FORCE_CPLEX_CHECK
 		    check(false, error.what());
 		#else
 		    std::cerr << error.what() << std::endl;
 		    std::cerr << "Cplex license check failed, lp check skipped" << std::endl;
 		#endif
+		  }
 		    cloneTest<CplexLp>();
 		#endif
 		#ifdef HAVE_SOPLEX
+		  {
 		    SoplexLp lp_soplex1,lp_soplex2;
 		    lpTest(lp_soplex1);

@@ -36,23 +36,21 @@
+		}
 		int main()
+		{
 		  Timer T;
 		  unsigned int n;
-		  for(n=0;T.realTime()<1.0;n++) ;
+		  for(n=0;T.realTime()<0.1;n++) ;
 		  std::cout << T << " (" << n << " time queries)\n";
 		  T.restart();
 		  while(T.realTime()<2.0) ;
-		  std::cout << T << '\n';
 		  TimeStamp full;
 		  TimeStamp t;
 		  t=runningTimeTest(f,1,&n,&full);
+		  t=runningTimeTest(f,0.1,&n,&full);
 		  std::cout << t << " (" << n << " tests)\n";
 		  std::cout << "Total: " << full << "\n";
 		  t=runningTimeTest(g,1,&n,&full);
+		  t=runningTimeTest(g,0.1,&n,&full);
 		  std::cout << t << " (" << n << " tests)\n";
 		  std::cout << "Total: " << full << "\n";
 		  return 0;
+		}

 		INCLUDE_DIRECTORIES(
 		  ${CMAKE_SOURCE_DIR}
 		  ${CMAKE_BINARY_DIR}
 		  ${PROJECT_SOURCE_DIR}
 		  ${PROJECT_BINARY_DIR}
+		)
-		LINK_DIRECTORIES(${CMAKE_BINARY_DIR}/lemon)
+		LINK_DIRECTORIES(${PROJECT_BINARY_DIR}/lemon)
 		ADD_EXECUTABLE(lgf-gen lgf-gen.cc)
 		TARGET_LINK_LIBRARIES(lgf-gen lemon)
 		ADD_EXECUTABLE(dimacs-to-lgf dimacs-to-lgf.cc)
 		TARGET_LINK_LIBRARIES(dimacs-to-lgf lemon)
@@ -19,10 +19,10 @@
 		  RUNTIME DESTINATION bin
 		  COMPONENT bin
+		)
 		IF(NOT WIN32)
 		  INSTALL(
 		    FILES ${CMAKE_CURRENT_SOURCE_DIR}/lemon-0.x-to-1.x.sh
 		    RUNTIME DESTINATION bin
 		    PROGRAMS ${CMAKE_CURRENT_SOURCE_DIR}/lemon-0.x-to-1.x.sh
 		    DESTINATION bin
 		    COMPONENT bin)
 		ENDIF(NOT WIN32)

@@ -19,32 +19,31 @@
 		        -e "s/\<directed graph\>/_digr_aph_label_/g"\
 		        -e "s/\<directed graphs\>/_digr_aph_label_s/g"\
 		        -e "s/\<directed edge\>/_ar_c_label_/g"\
 		        -e "s/\<directed edges\>/_ar_c_label_s/g"\
 		        -e "s/UGraph/_Gr_aph_label_/g"\
 		        -e "s/u[Gg]raph/_gr_aph_label_/g"\
-		        -e "s/\<Graph\>/_Digr_aph_label_/g"\
 		        -e "s/Graph\>/_Digr_aph_label_/g"\
 		        -e "s/\<graph\>/_digr_aph_label_/g"\
-		        -e "s/\<Graphs\>/_Digr_aph_label_s/g"\
 		        -e "s/Graphs\>/_Digr_aph_label_s/g"\
 		        -e "s/\<graphs\>/_digr_aph_label_s/g"\
 		        -e "s/_Graph/__Gr_aph_label_/g"\
 		        -e "s/\([Gg]\)raph\([a-z_]\)/_\1r_aph_label_\2/g"\
 		        -e "s/\([Gg]\)raph\([a-z]\)/_\1r_aph_label_\2/g"\
 		        -e "s/\([a-z_]\)graph/\1_gr_aph_label_/g"\
 		        -e "s/Graph/_Digr_aph_label_/g"\
 		        -e "s/graph/_digr_aph_label_/g"\
 		        -e "s/UEdge/_Ed_ge_label_/g"\
 		        -e "s/u[Ee]dge/_ed_ge_label_/g"\
 		        -e "s/IncEdgeIt/_In_cEd_geIt_label_/g"\
-		        -e "s/\<Edge\>/_Ar_c_label_/g"\
 		        -e "s/Edge\>/_Ar_c_label_/g"\
 		        -e "s/\<edge\>/_ar_c_label_/g"\
-		        -e "s/\<Edges\>/_Ar_c_label_s/g"\
+		        -e "s/_edge\>/_ar_c_label_/g"\
 		        -e "s/Edges\>/_Ar_c_label_s/g"\
 		        -e "s/\<edges\>/_ar_c_label_s/g"\
 		        -e "s/_Edge/__Ed_ge_label_/g"\
 		        -e "s/Edge\([a-z_]\)/_Ed_ge_label_\1/g"\
 		        -e "s/edge\([a-z_]\)/_ed_ge_label_\1/g"\
 		        -e "s/\([a-z_]\)edge/\1_ed_ge_label_/g"\
 		        -e "s/_edges\>/_ar_c_label_s/g"\
 		        -e "s/\([Ee]\)dge\([a-z]\)/_\1d_ge_label_\2/g"\
 		        -e "s/\([a-z]\)edge/\1_ed_ge_label_/g"\
 		        -e "s/Edge/_Ar_c_label_/g"\
 		        -e "s/edge/_ar_c_label_/g"\
 		        -e "s/A[Nn]ode/_Re_d_label_/g"\
 		        -e "s/B[Nn]ode/_Blu_e_label_/g"\
 		        -e "s/A-[Nn]ode/_Re_d_label_/g"\
 		        -e "s/B-[Nn]ode/_Blu_e_label_/g"\
@@ -113,9 +112,14 @@
 		        -e "s/\<NodeSubGraphAdaptor\>/FilterNodes/g"\
 		        -e "s/\<nodeSubGraphAdaptor\>/filterNodes/g"\
 		        -e "s/\<ArcSubGraphAdaptor\>/FilterEdges/g"\
 		        -e "s/\<arcSubGraphAdaptor\>/filterEdges/g"\
 		        -e "s/\<DirGraphAdaptor\>/Orienter/g"\
 		        -e "s/\<dirGraphAdaptor\>/orienter/g"\
 		        -e "s/\<LpCplex\>/CplexLp/g"\
 		        -e "s/\<MipCplex\>/CplexMip/g"\
 		        -e "s/\<LpGlpk\>/GlpkLp/g"\
 		        -e "s/\<MipGlpk\>/GlpkMip/g"\
 		        -e "s/\<LpSoplex\>/SoplexLp/g"\
 		    <$i > $TMP
 		    mv $TMP $i
 		done