0
2
0
... | ... |
@@ -102,2 +102,28 @@ |
102 | 102 |
|
103 |
template <typename _Graph, bool _dir, typename _Map, |
|
104 |
typename _Converter = DefaultConverter<typename _Map::Value> > |
|
105 |
class GraphArcMapStorage : public MapStorageBase<typename _Graph::Edge> { |
|
106 |
public: |
|
107 |
typedef _Map Map; |
|
108 |
typedef _Converter Converter; |
|
109 |
typedef _Graph Graph; |
|
110 |
typedef typename Graph::Edge Item; |
|
111 |
static const bool dir = _dir; |
|
112 |
|
|
113 |
private: |
|
114 |
const Graph& _graph; |
|
115 |
Map& _map; |
|
116 |
Converter _converter; |
|
117 |
|
|
118 |
public: |
|
119 |
GraphArcMapStorage(const Graph& graph, Map& map, |
|
120 |
const Converter& converter = Converter()) |
|
121 |
: _graph(graph), _map(map), _converter(converter) {} |
|
122 |
virtual ~GraphArcMapStorage() {} |
|
123 |
|
|
124 |
virtual void set(const Item& item ,const std::string& value) { |
|
125 |
_map.set(_graph.direct(item, dir), _converter(value)); |
|
126 |
} |
|
127 |
}; |
|
128 |
|
|
103 | 129 |
class ValueStorageBase { |
... | ... |
@@ -148,2 +174,25 @@ |
148 | 174 |
|
175 |
template <typename Graph> |
|
176 |
struct GraphArcLookUpConverter { |
|
177 |
const Graph& _graph; |
|
178 |
const std::map<std::string, typename Graph::Edge>& _map; |
|
179 |
|
|
180 |
GraphArcLookUpConverter(const Graph& graph, |
|
181 |
const std::map<std::string, |
|
182 |
typename Graph::Edge>& map) |
|
183 |
: _graph(graph), _map(map) {} |
|
184 |
|
|
185 |
typename Graph::Arc operator()(const std::string& str) { |
|
186 |
if (str.empty() || (str[0] != '+' && str[0] != '-')) { |
|
187 |
throw DataFormatError("Item must start with '+' or '-'"); |
|
188 |
} |
|
189 |
typename std::map<std::string, typename Graph::Edge> |
|
190 |
::const_iterator it = _map.find(str.substr(1)); |
|
191 |
if (it == _map.end()) { |
|
192 |
throw DataFormatError("Item not found"); |
|
193 |
} |
|
194 |
return _graph.direct(it->second, str[0] == '+'); |
|
195 |
} |
|
196 |
}; |
|
197 |
|
|
149 | 198 |
bool isWhiteSpace(char c) { |
... | ... |
@@ -1182,2 +1231,844 @@ |
1182 | 1231 |
} |
1232 |
|
|
1233 |
/// \ingroup lemon_io |
|
1234 |
/// |
|
1235 |
/// \brief LGF reader for undirected graphs |
|
1236 |
/// |
|
1237 |
/// This utility reads an \ref lgf-format "LGF" file. |
|
1238 |
template <typename _Graph> |
|
1239 |
class GraphReader { |
|
1240 |
public: |
|
1241 |
|
|
1242 |
typedef _Graph Graph; |
|
1243 |
TEMPLATE_GRAPH_TYPEDEFS(Graph); |
|
1244 |
|
|
1245 |
private: |
|
1246 |
|
|
1247 |
|
|
1248 |
std::istream* _is; |
|
1249 |
bool local_is; |
|
1250 |
|
|
1251 |
Graph& _graph; |
|
1252 |
|
|
1253 |
std::string _nodes_caption; |
|
1254 |
std::string _edges_caption; |
|
1255 |
std::string _attributes_caption; |
|
1256 |
|
|
1257 |
typedef std::map<std::string, Node> NodeIndex; |
|
1258 |
NodeIndex _node_index; |
|
1259 |
typedef std::map<std::string, Edge> EdgeIndex; |
|
1260 |
EdgeIndex _edge_index; |
|
1261 |
|
|
1262 |
typedef std::vector<std::pair<std::string, |
|
1263 |
_reader_bits::MapStorageBase<Node>*> > NodeMaps; |
|
1264 |
NodeMaps _node_maps; |
|
1265 |
|
|
1266 |
typedef std::vector<std::pair<std::string, |
|
1267 |
_reader_bits::MapStorageBase<Edge>*> > EdgeMaps; |
|
1268 |
EdgeMaps _edge_maps; |
|
1269 |
|
|
1270 |
typedef std::multimap<std::string, _reader_bits::ValueStorageBase*> |
|
1271 |
Attributes; |
|
1272 |
Attributes _attributes; |
|
1273 |
|
|
1274 |
typedef std::map<std::string, _reader_bits::Section*> Sections; |
|
1275 |
Sections _sections; |
|
1276 |
|
|
1277 |
bool _use_nodes; |
|
1278 |
bool _use_edges; |
|
1279 |
|
|
1280 |
int line_num; |
|
1281 |
std::istringstream line; |
|
1282 |
|
|
1283 |
public: |
|
1284 |
|
|
1285 |
/// \brief Constructor |
|
1286 |
/// |
|
1287 |
/// Construct a undirected graph reader, which reads from the given |
|
1288 |
/// input stream. |
|
1289 |
GraphReader(std::istream& is, Graph& graph) |
|
1290 |
: _is(&is), local_is(false), _graph(graph), |
|
1291 |
_use_nodes(false), _use_edges(false) {} |
|
1292 |
|
|
1293 |
/// \brief Constructor |
|
1294 |
/// |
|
1295 |
/// Construct a undirected graph reader, which reads from the given |
|
1296 |
/// file. |
|
1297 |
GraphReader(const std::string& fn, Graph& graph) |
|
1298 |
: _is(new std::ifstream(fn.c_str())), local_is(true), _graph(graph), |
|
1299 |
_use_nodes(false), _use_edges(false) {} |
|
1300 |
|
|
1301 |
/// \brief Constructor |
|
1302 |
/// |
|
1303 |
/// Construct a undirected graph reader, which reads from the given |
|
1304 |
/// file. |
|
1305 |
GraphReader(const char* fn, Graph& graph) |
|
1306 |
: _is(new std::ifstream(fn)), local_is(true), _graph(graph), |
|
1307 |
_use_nodes(false), _use_edges(false) {} |
|
1308 |
|
|
1309 |
/// \brief Copy constructor |
|
1310 |
/// |
|
1311 |
/// The copy constructor transfers all data from the other reader, |
|
1312 |
/// therefore the copied reader will not be usable more. |
|
1313 |
GraphReader(GraphReader& other) |
|
1314 |
: _is(other._is), local_is(other.local_is), _graph(other._graph), |
|
1315 |
_use_nodes(other._use_nodes), _use_edges(other._use_edges) { |
|
1316 |
|
|
1317 |
other._is = 0; |
|
1318 |
other.local_is = false; |
|
1319 |
|
|
1320 |
_node_index.swap(other._node_index); |
|
1321 |
_edge_index.swap(other._edge_index); |
|
1322 |
|
|
1323 |
_node_maps.swap(other._node_maps); |
|
1324 |
_edge_maps.swap(other._edge_maps); |
|
1325 |
_attributes.swap(other._attributes); |
|
1326 |
|
|
1327 |
_nodes_caption = other._nodes_caption; |
|
1328 |
_edges_caption = other._edges_caption; |
|
1329 |
_attributes_caption = other._attributes_caption; |
|
1330 |
|
|
1331 |
_sections.swap(other._sections); |
|
1332 |
} |
|
1333 |
|
|
1334 |
/// \brief Destructor |
|
1335 |
~GraphReader() { |
|
1336 |
for (typename NodeMaps::iterator it = _node_maps.begin(); |
|
1337 |
it != _node_maps.end(); ++it) { |
|
1338 |
delete it->second; |
|
1339 |
} |
|
1340 |
|
|
1341 |
for (typename EdgeMaps::iterator it = _edge_maps.begin(); |
|
1342 |
it != _edge_maps.end(); ++it) { |
|
1343 |
delete it->second; |
|
1344 |
} |
|
1345 |
|
|
1346 |
for (typename Attributes::iterator it = _attributes.begin(); |
|
1347 |
it != _attributes.end(); ++it) { |
|
1348 |
delete it->second; |
|
1349 |
} |
|
1350 |
|
|
1351 |
for (typename Sections::iterator it = _sections.begin(); |
|
1352 |
it != _sections.end(); ++it) { |
|
1353 |
delete it->second; |
|
1354 |
} |
|
1355 |
|
|
1356 |
if (local_is) { |
|
1357 |
delete _is; |
|
1358 |
} |
|
1359 |
|
|
1360 |
} |
|
1361 |
|
|
1362 |
private: |
|
1363 |
|
|
1364 |
GraphReader& operator=(const GraphReader&); |
|
1365 |
|
|
1366 |
public: |
|
1367 |
|
|
1368 |
/// \name Reading rules |
|
1369 |
/// @{ |
|
1370 |
|
|
1371 |
/// \brief Node map reading rule |
|
1372 |
/// |
|
1373 |
/// Add a node map reading rule to the reader. |
|
1374 |
template <typename Map> |
|
1375 |
GraphReader& nodeMap(const std::string& caption, Map& map) { |
|
1376 |
checkConcept<concepts::WriteMap<Node, typename Map::Value>, Map>(); |
|
1377 |
_reader_bits::MapStorageBase<Node>* storage = |
|
1378 |
new _reader_bits::MapStorage<Node, Map>(map); |
|
1379 |
_node_maps.push_back(std::make_pair(caption, storage)); |
|
1380 |
return *this; |
|
1381 |
} |
|
1382 |
|
|
1383 |
/// \brief Node map reading rule |
|
1384 |
/// |
|
1385 |
/// Add a node map reading rule with specialized converter to the |
|
1386 |
/// reader. |
|
1387 |
template <typename Map, typename Converter> |
|
1388 |
GraphReader& nodeMap(const std::string& caption, Map& map, |
|
1389 |
const Converter& converter = Converter()) { |
|
1390 |
checkConcept<concepts::WriteMap<Node, typename Map::Value>, Map>(); |
|
1391 |
_reader_bits::MapStorageBase<Node>* storage = |
|
1392 |
new _reader_bits::MapStorage<Node, Map, Converter>(map, converter); |
|
1393 |
_node_maps.push_back(std::make_pair(caption, storage)); |
|
1394 |
return *this; |
|
1395 |
} |
|
1396 |
|
|
1397 |
/// \brief Edge map reading rule |
|
1398 |
/// |
|
1399 |
/// Add an edge map reading rule to the reader. |
|
1400 |
template <typename Map> |
|
1401 |
GraphReader& edgeMap(const std::string& caption, Map& map) { |
|
1402 |
checkConcept<concepts::WriteMap<Edge, typename Map::Value>, Map>(); |
|
1403 |
_reader_bits::MapStorageBase<Edge>* storage = |
|
1404 |
new _reader_bits::MapStorage<Edge, Map>(map); |
|
1405 |
_edge_maps.push_back(std::make_pair(caption, storage)); |
|
1406 |
return *this; |
|
1407 |
} |
|
1408 |
|
|
1409 |
/// \brief Edge map reading rule |
|
1410 |
/// |
|
1411 |
/// Add an edge map reading rule with specialized converter to the |
|
1412 |
/// reader. |
|
1413 |
template <typename Map, typename Converter> |
|
1414 |
GraphReader& edgeMap(const std::string& caption, Map& map, |
|
1415 |
const Converter& converter = Converter()) { |
|
1416 |
checkConcept<concepts::WriteMap<Edge, typename Map::Value>, Map>(); |
|
1417 |
_reader_bits::MapStorageBase<Edge>* storage = |
|
1418 |
new _reader_bits::MapStorage<Edge, Map, Converter>(map, converter); |
|
1419 |
_edge_maps.push_back(std::make_pair(caption, storage)); |
|
1420 |
return *this; |
|
1421 |
} |
|
1422 |
|
|
1423 |
/// \brief Arc map reading rule |
|
1424 |
/// |
|
1425 |
/// Add an arc map reading rule to the reader. |
|
1426 |
template <typename Map> |
|
1427 |
GraphReader& arcMap(const std::string& caption, Map& map) { |
|
1428 |
checkConcept<concepts::WriteMap<Arc, typename Map::Value>, Map>(); |
|
1429 |
_reader_bits::MapStorageBase<Edge>* forward_storage = |
|
1430 |
new _reader_bits::GraphArcMapStorage<Graph, true, Map>(_graph, map); |
|
1431 |
_edge_maps.push_back(std::make_pair('+' + caption, forward_storage)); |
|
1432 |
_reader_bits::MapStorageBase<Edge>* backward_storage = |
|
1433 |
new _reader_bits::GraphArcMapStorage<Graph, false, Map>(_graph, map); |
|
1434 |
_edge_maps.push_back(std::make_pair('-' + caption, backward_storage)); |
|
1435 |
return *this; |
|
1436 |
} |
|
1437 |
|
|
1438 |
/// \brief Arc map reading rule |
|
1439 |
/// |
|
1440 |
/// Add an arc map reading rule with specialized converter to the |
|
1441 |
/// reader. |
|
1442 |
template <typename Map, typename Converter> |
|
1443 |
GraphReader& arcMap(const std::string& caption, Map& map, |
|
1444 |
const Converter& converter = Converter()) { |
|
1445 |
checkConcept<concepts::WriteMap<Arc, typename Map::Value>, Map>(); |
|
1446 |
_reader_bits::MapStorageBase<Edge>* forward_storage = |
|
1447 |
new _reader_bits::GraphArcMapStorage<Graph, true, Map, Converter> |
|
1448 |
(_graph, map, converter); |
|
1449 |
_edge_maps.push_back(std::make_pair('+' + caption, forward_storage)); |
|
1450 |
_reader_bits::MapStorageBase<Edge>* backward_storage = |
|
1451 |
new _reader_bits::GraphArcMapStorage<Graph, false, Map, Converter> |
|
1452 |
(_graph, map, converter); |
|
1453 |
_edge_maps.push_back(std::make_pair('-' + caption, backward_storage)); |
|
1454 |
return *this; |
|
1455 |
} |
|
1456 |
|
|
1457 |
/// \brief Attribute reading rule |
|
1458 |
/// |
|
1459 |
/// Add an attribute reading rule to the reader. |
|
1460 |
template <typename Value> |
|
1461 |
GraphReader& attribute(const std::string& caption, Value& value) { |
|
1462 |
_reader_bits::ValueStorageBase* storage = |
|
1463 |
new _reader_bits::ValueStorage<Value>(value); |
|
1464 |
_attributes.insert(std::make_pair(caption, storage)); |
|
1465 |
return *this; |
|
1466 |
} |
|
1467 |
|
|
1468 |
/// \brief Attribute reading rule |
|
1469 |
/// |
|
1470 |
/// Add an attribute reading rule with specialized converter to the |
|
1471 |
/// reader. |
|
1472 |
template <typename Value, typename Converter> |
|
1473 |
GraphReader& attribute(const std::string& caption, Value& value, |
|
1474 |
const Converter& converter = Converter()) { |
|
1475 |
_reader_bits::ValueStorageBase* storage = |
|
1476 |
new _reader_bits::ValueStorage<Value, Converter>(value, converter); |
|
1477 |
_attributes.insert(std::make_pair(caption, storage)); |
|
1478 |
return *this; |
|
1479 |
} |
|
1480 |
|
|
1481 |
/// \brief Node reading rule |
|
1482 |
/// |
|
1483 |
/// Add a node reading rule to reader. |
|
1484 |
GraphReader& node(const std::string& caption, Node& node) { |
|
1485 |
typedef _reader_bits::MapLookUpConverter<Node> Converter; |
|
1486 |
Converter converter(_node_index); |
|
1487 |
_reader_bits::ValueStorageBase* storage = |
|
1488 |
new _reader_bits::ValueStorage<Node, Converter>(node, converter); |
|
1489 |
_attributes.insert(std::make_pair(caption, storage)); |
|
1490 |
return *this; |
|
1491 |
} |
|
1492 |
|
|
1493 |
/// \brief Edge reading rule |
|
1494 |
/// |
|
1495 |
/// Add an edge reading rule to reader. |
|
1496 |
GraphReader& edge(const std::string& caption, Edge& edge) { |
|
1497 |
typedef _reader_bits::MapLookUpConverter<Edge> Converter; |
|
1498 |
Converter converter(_edge_index); |
|
1499 |
_reader_bits::ValueStorageBase* storage = |
|
1500 |
new _reader_bits::ValueStorage<Edge, Converter>(edge, converter); |
|
1501 |
_attributes.insert(std::make_pair(caption, storage)); |
|
1502 |
return *this; |
|
1503 |
} |
|
1504 |
|
|
1505 |
/// \brief Arc reading rule |
|
1506 |
/// |
|
1507 |
/// Add an arc reading rule to reader. |
|
1508 |
GraphReader& arc(const std::string& caption, Arc& arc) { |
|
1509 |
typedef _reader_bits::GraphArcLookUpConverter<Graph> Converter; |
|
1510 |
Converter converter(_graph, _edge_index); |
|
1511 |
_reader_bits::ValueStorageBase* storage = |
|
1512 |
new _reader_bits::ValueStorage<Arc, Converter>(arc, converter); |
|
1513 |
_attributes.insert(std::make_pair(caption, storage)); |
|
1514 |
return *this; |
|
1515 |
} |
|
1516 |
|
|
1517 |
/// @} |
|
1518 |
|
|
1519 |
/// \name Select section by name |
|
1520 |
/// @{ |
|
1521 |
|
|
1522 |
/// \brief Set \c \@nodes section to be read |
|
1523 |
/// |
|
1524 |
/// Set \c \@nodes section to be read |
|
1525 |
GraphReader& nodes(const std::string& caption) { |
|
1526 |
_nodes_caption = caption; |
|
1527 |
return *this; |
|
1528 |
} |
|
1529 |
|
|
1530 |
/// \brief Set \c \@edges section to be read |
|
1531 |
/// |
|
1532 |
/// Set \c \@edges section to be read |
|
1533 |
GraphReader& edges(const std::string& caption) { |
|
1534 |
_edges_caption = caption; |
|
1535 |
return *this; |
|
1536 |
} |
|
1537 |
|
|
1538 |
/// \brief Set \c \@attributes section to be read |
|
1539 |
/// |
|
1540 |
/// Set \c \@attributes section to be read |
|
1541 |
GraphReader& attributes(const std::string& caption) { |
|
1542 |
_attributes_caption = caption; |
|
1543 |
return *this; |
|
1544 |
} |
|
1545 |
|
|
1546 |
/// @} |
|
1547 |
|
|
1548 |
/// \name Section readers |
|
1549 |
/// @{ |
|
1550 |
|
|
1551 |
/// \brief Add a section processor with line oriented reading |
|
1552 |
/// |
|
1553 |
/// In the \e LGF file extra sections can be placed, which contain |
|
1554 |
/// any data in arbitrary format. These sections can be read with |
|
1555 |
/// this function line by line. The first parameter is the type |
|
1556 |
/// descriptor of the section, the second is a functor, which |
|
1557 |
/// takes just one \c std::string parameter. At the reading |
|
1558 |
/// process, each line of the section will be given to the functor |
|
1559 |
/// object. However, the empty lines and the comment lines are |
|
1560 |
/// filtered out, and the leading whitespaces are stipped from |
|
1561 |
/// each processed string. |
|
1562 |
/// |
|
1563 |
/// For example let's see a section, which contain several |
|
1564 |
/// integers, which should be inserted into a vector. |
|
1565 |
///\code |
|
1566 |
/// @numbers |
|
1567 |
/// 12 45 23 |
|
1568 |
/// 4 |
|
1569 |
/// 23 6 |
|
1570 |
///\endcode |
|
1571 |
/// |
|
1572 |
/// The functor is implemented as an struct: |
|
1573 |
///\code |
|
1574 |
/// struct NumberSection { |
|
1575 |
/// std::vector<int>& _data; |
|
1576 |
/// NumberSection(std::vector<int>& data) : _data(data) {} |
|
1577 |
/// void operator()(const std::string& line) { |
|
1578 |
/// std::istringstream ls(line); |
|
1579 |
/// int value; |
|
1580 |
/// while (ls >> value) _data.push_back(value); |
|
1581 |
/// } |
|
1582 |
/// }; |
|
1583 |
/// |
|
1584 |
/// // ... |
|
1585 |
/// |
|
1586 |
/// reader.sectionLines("numbers", NumberSection(vec)); |
|
1587 |
///\endcode |
|
1588 |
template <typename Functor> |
|
1589 |
GraphReader& sectionLines(const std::string& type, Functor functor) { |
|
1590 |
LEMON_ASSERT(!type.empty(), "Type is not empty."); |
|
1591 |
LEMON_ASSERT(_sections.find(type) == _sections.end(), |
|
1592 |
"Multiple reading of section."); |
|
1593 |
LEMON_ASSERT(type != "nodes" && type != "arcs" && type != "edges" && |
|
1594 |
type != "attributes", "Multiple reading of section."); |
|
1595 |
_sections.insert(std::make_pair(type, |
|
1596 |
new _reader_bits::LineSection<Functor>(functor))); |
|
1597 |
return *this; |
|
1598 |
} |
|
1599 |
|
|
1600 |
|
|
1601 |
/// \brief Add a section processor with stream oriented reading |
|
1602 |
/// |
|
1603 |
/// In the \e LGF file extra sections can be placed, which contain |
|
1604 |
/// any data in arbitrary format. These sections can be read |
|
1605 |
/// directly with this function. The first parameter is the type |
|
1606 |
/// of the section, the second is a functor, which takes an \c |
|
1607 |
/// std::istream& and an int& parameter, the latter regard to the |
|
1608 |
/// line number of stream. The functor can read the input while |
|
1609 |
/// the section go on, and the line number should be modified |
|
1610 |
/// accordingly. |
|
1611 |
template <typename Functor> |
|
1612 |
GraphReader& sectionStream(const std::string& type, Functor functor) { |
|
1613 |
LEMON_ASSERT(!type.empty(), "Type is not empty."); |
|
1614 |
LEMON_ASSERT(_sections.find(type) == _sections.end(), |
|
1615 |
"Multiple reading of section."); |
|
1616 |
LEMON_ASSERT(type != "nodes" && type != "arcs" && type != "edges" && |
|
1617 |
type != "attributes", "Multiple reading of section."); |
|
1618 |
_sections.insert(std::make_pair(type, |
|
1619 |
new _reader_bits::StreamSection<Functor>(functor))); |
|
1620 |
return *this; |
|
1621 |
} |
|
1622 |
|
|
1623 |
/// @} |
|
1624 |
|
|
1625 |
/// \name Using previously constructed node or edge set |
|
1626 |
/// @{ |
|
1627 |
|
|
1628 |
/// \brief Use previously constructed node set |
|
1629 |
/// |
|
1630 |
/// Use previously constructed node set, and specify the node |
|
1631 |
/// label map. |
|
1632 |
template <typename Map> |
|
1633 |
GraphReader& useNodes(const Map& map) { |
|
1634 |
checkConcept<concepts::ReadMap<Node, typename Map::Value>, Map>(); |
|
1635 |
LEMON_ASSERT(!_use_nodes, "Multiple usage of useNodes() member"); |
|
1636 |
_use_nodes = true; |
|
1637 |
_writer_bits::DefaultConverter<typename Map::Value> converter; |
|
1638 |
for (NodeIt n(_graph); n != INVALID; ++n) { |
|
1639 |
_node_index.insert(std::make_pair(converter(map[n]), n)); |
|
1640 |
} |
|
1641 |
return *this; |
|
1642 |
} |
|
1643 |
|
|
1644 |
/// \brief Use previously constructed node set |
|
1645 |
/// |
|
1646 |
/// Use previously constructed node set, and specify the node |
|
1647 |
/// label map and a functor which converts the label map values to |
|
1648 |
/// std::string. |
|
1649 |
template <typename Map, typename Converter> |
|
1650 |
GraphReader& useNodes(const Map& map, |
|
1651 |
const Converter& converter = Converter()) { |
|
1652 |
checkConcept<concepts::ReadMap<Node, typename Map::Value>, Map>(); |
|
1653 |
LEMON_ASSERT(!_use_nodes, "Multiple usage of useNodes() member"); |
|
1654 |
_use_nodes = true; |
|
1655 |
for (NodeIt n(_graph); n != INVALID; ++n) { |
|
1656 |
_node_index.insert(std::make_pair(converter(map[n]), n)); |
|
1657 |
} |
|
1658 |
return *this; |
|
1659 |
} |
|
1660 |
|
|
1661 |
/// \brief Use previously constructed edge set |
|
1662 |
/// |
|
1663 |
/// Use previously constructed edge set, and specify the edge |
|
1664 |
/// label map. |
|
1665 |
template <typename Map> |
|
1666 |
GraphReader& useEdges(const Map& map) { |
|
1667 |
checkConcept<concepts::ReadMap<Edge, typename Map::Value>, Map>(); |
|
1668 |
LEMON_ASSERT(!_use_edges, "Multiple usage of useEdges() member"); |
|
1669 |
_use_edges = true; |
|
1670 |
_writer_bits::DefaultConverter<typename Map::Value> converter; |
|
1671 |
for (EdgeIt a(_graph); a != INVALID; ++a) { |
|
1672 |
_edge_index.insert(std::make_pair(converter(map[a]), a)); |
|
1673 |
} |
|
1674 |
return *this; |
|
1675 |
} |
|
1676 |
|
|
1677 |
/// \brief Use previously constructed edge set |
|
1678 |
/// |
|
1679 |
/// Use previously constructed edge set, and specify the edge |
|
1680 |
/// label map and a functor which converts the label map values to |
|
1681 |
/// std::string. |
|
1682 |
template <typename Map, typename Converter> |
|
1683 |
GraphReader& useEdges(const Map& map, |
|
1684 |
const Converter& converter = Converter()) { |
|
1685 |
checkConcept<concepts::ReadMap<Edge, typename Map::Value>, Map>(); |
|
1686 |
LEMON_ASSERT(!_use_edges, "Multiple usage of useEdges() member"); |
|
1687 |
_use_edges = true; |
|
1688 |
for (EdgeIt a(_graph); a != INVALID; ++a) { |
|
1689 |
_edge_index.insert(std::make_pair(converter(map[a]), a)); |
|
1690 |
} |
|
1691 |
return *this; |
|
1692 |
} |
|
1693 |
|
|
1694 |
/// @} |
|
1695 |
|
|
1696 |
private: |
|
1697 |
|
|
1698 |
bool readLine() { |
|
1699 |
std::string str; |
|
1700 |
while(++line_num, std::getline(*_is, str)) { |
|
1701 |
line.clear(); line.str(str); |
|
1702 |
char c; |
|
1703 |
if (line >> std::ws >> c && c != '#') { |
|
1704 |
line.putback(c); |
|
1705 |
return true; |
|
1706 |
} |
|
1707 |
} |
|
1708 |
return false; |
|
1709 |
} |
|
1710 |
|
|
1711 |
bool readSuccess() { |
|
1712 |
return static_cast<bool>(*_is); |
|
1713 |
} |
|
1714 |
|
|
1715 |
void skipSection() { |
|
1716 |
char c; |
|
1717 |
while (readSuccess() && line >> c && c != '@') { |
|
1718 |
readLine(); |
|
1719 |
} |
|
1720 |
line.putback(c); |
|
1721 |
} |
|
1722 |
|
|
1723 |
void readNodes() { |
|
1724 |
|
|
1725 |
std::vector<int> map_index(_node_maps.size()); |
|
1726 |
int map_num, label_index; |
|
1727 |
|
|
1728 |
if (!readLine()) |
|
1729 |
throw DataFormatError("Cannot find map captions"); |
|
1730 |
|
|
1731 |
{ |
|
1732 |
std::map<std::string, int> maps; |
|
1733 |
|
|
1734 |
std::string map; |
|
1735 |
int index = 0; |
|
1736 |
while (_reader_bits::readToken(line, map)) { |
|
1737 |
if (maps.find(map) != maps.end()) { |
|
1738 |
std::ostringstream msg; |
|
1739 |
msg << "Multiple occurence of node map: " << map; |
|
1740 |
throw DataFormatError(msg.str().c_str()); |
|
1741 |
} |
|
1742 |
maps.insert(std::make_pair(map, index)); |
|
1743 |
++index; |
|
1744 |
} |
|
1745 |
|
|
1746 |
for (int i = 0; i < static_cast<int>(_node_maps.size()); ++i) { |
|
1747 |
std::map<std::string, int>::iterator jt = |
|
1748 |
maps.find(_node_maps[i].first); |
|
1749 |
if (jt == maps.end()) { |
|
1750 |
std::ostringstream msg; |
|
1751 |
msg << "Map not found in file: " << _node_maps[i].first; |
|
1752 |
throw DataFormatError(msg.str().c_str()); |
|
1753 |
} |
|
1754 |
map_index[i] = jt->second; |
|
1755 |
} |
|
1756 |
|
|
1757 |
{ |
|
1758 |
std::map<std::string, int>::iterator jt = maps.find("label"); |
|
1759 |
if (jt == maps.end()) |
|
1760 |
throw DataFormatError("Label map not found in file"); |
|
1761 |
label_index = jt->second; |
|
1762 |
} |
|
1763 |
map_num = maps.size(); |
|
1764 |
} |
|
1765 |
|
|
1766 |
char c; |
|
1767 |
while (readLine() && line >> c && c != '@') { |
|
1768 |
line.putback(c); |
|
1769 |
|
|
1770 |
std::vector<std::string> tokens(map_num); |
|
1771 |
for (int i = 0; i < map_num; ++i) { |
|
1772 |
if (!_reader_bits::readToken(line, tokens[i])) { |
|
1773 |
std::ostringstream msg; |
|
1774 |
msg << "Column not found (" << i + 1 << ")"; |
|
1775 |
throw DataFormatError(msg.str().c_str()); |
|
1776 |
} |
|
1777 |
} |
|
1778 |
if (line >> std::ws >> c) |
|
1779 |
throw DataFormatError("Extra character on the end of line"); |
|
1780 |
|
|
1781 |
Node n; |
|
1782 |
if (!_use_nodes) { |
|
1783 |
n = _graph.addNode(); |
|
1784 |
_node_index.insert(std::make_pair(tokens[label_index], n)); |
|
1785 |
} else { |
|
1786 |
typename std::map<std::string, Node>::iterator it = |
|
1787 |
_node_index.find(tokens[label_index]); |
|
1788 |
if (it == _node_index.end()) { |
|
1789 |
std::ostringstream msg; |
|
1790 |
msg << "Node with label not found: " << tokens[label_index]; |
|
1791 |
throw DataFormatError(msg.str().c_str()); |
|
1792 |
} |
|
1793 |
n = it->second; |
|
1794 |
} |
|
1795 |
|
|
1796 |
for (int i = 0; i < static_cast<int>(_node_maps.size()); ++i) { |
|
1797 |
_node_maps[i].second->set(n, tokens[map_index[i]]); |
|
1798 |
} |
|
1799 |
|
|
1800 |
} |
|
1801 |
if (readSuccess()) { |
|
1802 |
line.putback(c); |
|
1803 |
} |
|
1804 |
} |
|
1805 |
|
|
1806 |
void readEdges() { |
|
1807 |
|
|
1808 |
std::vector<int> map_index(_edge_maps.size()); |
|
1809 |
int map_num, label_index; |
|
1810 |
|
|
1811 |
if (!readLine()) |
|
1812 |
throw DataFormatError("Cannot find map captions"); |
|
1813 |
|
|
1814 |
{ |
|
1815 |
std::map<std::string, int> maps; |
|
1816 |
|
|
1817 |
std::string map; |
|
1818 |
int index = 0; |
|
1819 |
while (_reader_bits::readToken(line, map)) { |
|
1820 |
if (maps.find(map) != maps.end()) { |
|
1821 |
std::ostringstream msg; |
|
1822 |
msg << "Multiple occurence of edge map: " << map; |
|
1823 |
throw DataFormatError(msg.str().c_str()); |
|
1824 |
} |
|
1825 |
maps.insert(std::make_pair(map, index)); |
|
1826 |
++index; |
|
1827 |
} |
|
1828 |
|
|
1829 |
for (int i = 0; i < static_cast<int>(_edge_maps.size()); ++i) { |
|
1830 |
std::map<std::string, int>::iterator jt = |
|
1831 |
maps.find(_edge_maps[i].first); |
|
1832 |
if (jt == maps.end()) { |
|
1833 |
std::ostringstream msg; |
|
1834 |
msg << "Map not found in file: " << _edge_maps[i].first; |
|
1835 |
throw DataFormatError(msg.str().c_str()); |
|
1836 |
} |
|
1837 |
map_index[i] = jt->second; |
|
1838 |
} |
|
1839 |
|
|
1840 |
{ |
|
1841 |
std::map<std::string, int>::iterator jt = maps.find("label"); |
|
1842 |
if (jt == maps.end()) |
|
1843 |
throw DataFormatError("Label map not found in file"); |
|
1844 |
label_index = jt->second; |
|
1845 |
} |
|
1846 |
map_num = maps.size(); |
|
1847 |
} |
|
1848 |
|
|
1849 |
char c; |
|
1850 |
while (readLine() && line >> c && c != '@') { |
|
1851 |
line.putback(c); |
|
1852 |
|
|
1853 |
std::string source_token; |
|
1854 |
std::string target_token; |
|
1855 |
|
|
1856 |
if (!_reader_bits::readToken(line, source_token)) |
|
1857 |
throw DataFormatError("Source not found"); |
|
1858 |
|
|
1859 |
if (!_reader_bits::readToken(line, target_token)) |
|
1860 |
throw DataFormatError("Source not found"); |
|
1861 |
|
|
1862 |
std::vector<std::string> tokens(map_num); |
|
1863 |
for (int i = 0; i < map_num; ++i) { |
|
1864 |
if (!_reader_bits::readToken(line, tokens[i])) { |
|
1865 |
std::ostringstream msg; |
|
1866 |
msg << "Column not found (" << i + 1 << ")"; |
|
1867 |
throw DataFormatError(msg.str().c_str()); |
|
1868 |
} |
|
1869 |
} |
|
1870 |
if (line >> std::ws >> c) |
|
1871 |
throw DataFormatError("Extra character on the end of line"); |
|
1872 |
|
|
1873 |
Edge e; |
|
1874 |
if (!_use_edges) { |
|
1875 |
|
|
1876 |
typename NodeIndex::iterator it; |
|
1877 |
|
|
1878 |
it = _node_index.find(source_token); |
|
1879 |
if (it == _node_index.end()) { |
|
1880 |
std::ostringstream msg; |
|
1881 |
msg << "Item not found: " << source_token; |
|
1882 |
throw DataFormatError(msg.str().c_str()); |
|
1883 |
} |
|
1884 |
Node source = it->second; |
|
1885 |
|
|
1886 |
it = _node_index.find(target_token); |
|
1887 |
if (it == _node_index.end()) { |
|
1888 |
std::ostringstream msg; |
|
1889 |
msg << "Item not found: " << target_token; |
|
1890 |
throw DataFormatError(msg.str().c_str()); |
|
1891 |
} |
|
1892 |
Node target = it->second; |
|
1893 |
|
|
1894 |
e = _graph.addEdge(source, target); |
|
1895 |
_edge_index.insert(std::make_pair(tokens[label_index], e)); |
|
1896 |
} else { |
|
1897 |
typename std::map<std::string, Edge>::iterator it = |
|
1898 |
_edge_index.find(tokens[label_index]); |
|
1899 |
if (it == _edge_index.end()) { |
|
1900 |
std::ostringstream msg; |
|
1901 |
msg << "Edge with label not found: " << tokens[label_index]; |
|
1902 |
throw DataFormatError(msg.str().c_str()); |
|
1903 |
} |
|
1904 |
e = it->second; |
|
1905 |
} |
|
1906 |
|
|
1907 |
for (int i = 0; i < static_cast<int>(_edge_maps.size()); ++i) { |
|
1908 |
_edge_maps[i].second->set(e, tokens[map_index[i]]); |
|
1909 |
} |
|
1910 |
|
|
1911 |
} |
|
1912 |
if (readSuccess()) { |
|
1913 |
line.putback(c); |
|
1914 |
} |
|
1915 |
} |
|
1916 |
|
|
1917 |
void readAttributes() { |
|
1918 |
|
|
1919 |
std::set<std::string> read_attr; |
|
1920 |
|
|
1921 |
char c; |
|
1922 |
while (readLine() && line >> c && c != '@') { |
|
1923 |
line.putback(c); |
|
1924 |
|
|
1925 |
std::string attr, token; |
|
1926 |
if (!_reader_bits::readToken(line, attr)) |
|
1927 |
throw DataFormatError("Attribute name not found"); |
|
1928 |
if (!_reader_bits::readToken(line, token)) |
|
1929 |
throw DataFormatError("Attribute value not found"); |
|
1930 |
if (line >> c) |
|
1931 |
throw DataFormatError("Extra character on the end of line"); |
|
1932 |
|
|
1933 |
{ |
|
1934 |
std::set<std::string>::iterator it = read_attr.find(attr); |
|
1935 |
if (it != read_attr.end()) { |
|
1936 |
std::ostringstream msg; |
|
1937 |
msg << "Multiple occurence of attribute " << attr; |
|
1938 |
throw DataFormatError(msg.str().c_str()); |
|
1939 |
} |
|
1940 |
read_attr.insert(attr); |
|
1941 |
} |
|
1942 |
|
|
1943 |
{ |
|
1944 |
typename Attributes::iterator it = _attributes.lower_bound(attr); |
|
1945 |
while (it != _attributes.end() && it->first == attr) { |
|
1946 |
it->second->set(token); |
|
1947 |
++it; |
|
1948 |
} |
|
1949 |
} |
|
1950 |
|
|
1951 |
} |
|
1952 |
if (readSuccess()) { |
|
1953 |
line.putback(c); |
|
1954 |
} |
|
1955 |
for (typename Attributes::iterator it = _attributes.begin(); |
|
1956 |
it != _attributes.end(); ++it) { |
|
1957 |
if (read_attr.find(it->first) == read_attr.end()) { |
|
1958 |
std::ostringstream msg; |
|
1959 |
msg << "Attribute not found in file: " << it->first; |
|
1960 |
throw DataFormatError(msg.str().c_str()); |
|
1961 |
} |
|
1962 |
} |
|
1963 |
} |
|
1964 |
|
|
1965 |
public: |
|
1966 |
|
|
1967 |
/// \name Execution of the reader |
|
1968 |
/// @{ |
|
1969 |
|
|
1970 |
/// \brief Start the batch processing |
|
1971 |
/// |
|
1972 |
/// This function starts the batch processing |
|
1973 |
void run() { |
|
1974 |
|
|
1975 |
LEMON_ASSERT(_is != 0, "This reader assigned to an other reader"); |
|
1976 |
|
|
1977 |
bool nodes_done = false; |
|
1978 |
bool edges_done = false; |
|
1979 |
bool attributes_done = false; |
|
1980 |
std::set<std::string> extra_sections; |
|
1981 |
|
|
1982 |
line_num = 0; |
|
1983 |
readLine(); |
|
1984 |
|
|
1985 |
while (readSuccess()) { |
|
1986 |
skipSection(); |
|
1987 |
try { |
|
1988 |
char c; |
|
1989 |
std::string section, caption; |
|
1990 |
line >> c; |
|
1991 |
_reader_bits::readToken(line, section); |
|
1992 |
_reader_bits::readToken(line, caption); |
|
1993 |
|
|
1994 |
if (line >> c) |
|
1995 |
throw DataFormatError("Extra character on the end of line"); |
|
1996 |
|
|
1997 |
if (section == "nodes" && !nodes_done) { |
|
1998 |
if (_nodes_caption.empty() || _nodes_caption == caption) { |
|
1999 |
readNodes(); |
|
2000 |
nodes_done = true; |
|
2001 |
} |
|
2002 |
} else if ((section == "edges" || section == "arcs") && |
|
2003 |
!edges_done) { |
|
2004 |
if (_edges_caption.empty() || _edges_caption == caption) { |
|
2005 |
readEdges(); |
|
2006 |
edges_done = true; |
|
2007 |
} |
|
2008 |
} else if (section == "attributes" && !attributes_done) { |
|
2009 |
if (_attributes_caption.empty() || _attributes_caption == caption) { |
|
2010 |
readAttributes(); |
|
2011 |
attributes_done = true; |
|
2012 |
} |
|
2013 |
} else { |
|
2014 |
if (extra_sections.find(section) != extra_sections.end()) { |
|
2015 |
std::ostringstream msg; |
|
2016 |
msg << "Multiple occurence of section " << section; |
|
2017 |
throw DataFormatError(msg.str().c_str()); |
|
2018 |
} |
|
2019 |
Sections::iterator it = _sections.find(section); |
|
2020 |
if (it != _sections.end()) { |
|
2021 |
extra_sections.insert(section); |
|
2022 |
it->second->process(*_is, line_num); |
|
2023 |
readLine(); |
|
2024 |
} else { |
|
2025 |
readLine(); |
|
2026 |
skipSection(); |
|
2027 |
} |
|
2028 |
} |
|
2029 |
} catch (DataFormatError& error) { |
|
2030 |
error.line(line_num); |
|
2031 |
throw; |
|
2032 |
} |
|
2033 |
} |
|
2034 |
|
|
2035 |
if (!nodes_done) { |
|
2036 |
throw DataFormatError("Section @nodes not found"); |
|
2037 |
} |
|
2038 |
|
|
2039 |
if (!edges_done) { |
|
2040 |
throw DataFormatError("Section @edges not found"); |
|
2041 |
} |
|
2042 |
|
|
2043 |
if (!attributes_done && !_attributes.empty()) { |
|
2044 |
throw DataFormatError("Section @attributes not found"); |
|
2045 |
} |
|
2046 |
|
|
2047 |
} |
|
2048 |
|
|
2049 |
/// @} |
|
2050 |
|
|
2051 |
}; |
|
2052 |
|
|
2053 |
/// \relates GraphReader |
|
2054 |
template <typename Graph> |
|
2055 |
GraphReader<Graph> graphReader(std::istream& is, Graph& graph) { |
|
2056 |
GraphReader<Graph> tmp(is, graph); |
|
2057 |
return tmp; |
|
2058 |
} |
|
2059 |
|
|
2060 |
/// \relates GraphReader |
|
2061 |
template <typename Graph> |
|
2062 |
GraphReader<Graph> graphReader(const std::string& fn, |
|
2063 |
Graph& graph) { |
|
2064 |
GraphReader<Graph> tmp(fn, graph); |
|
2065 |
return tmp; |
|
2066 |
} |
|
2067 |
|
|
2068 |
/// \relates GraphReader |
|
2069 |
template <typename Graph> |
|
2070 |
GraphReader<Graph> graphReader(const char* fn, Graph& graph) { |
|
2071 |
GraphReader<Graph> tmp(fn, graph); |
|
2072 |
return tmp; |
|
2073 |
} |
|
1183 | 2074 |
} |
... | ... |
@@ -73,2 +73,23 @@ |
73 | 73 |
|
74 |
template <typename _Graph, bool _dir, typename _Map> |
|
75 |
class GraphArcMapLess { |
|
76 |
public: |
|
77 |
typedef _Map Map; |
|
78 |
typedef _Graph Graph; |
|
79 |
typedef typename Graph::Edge Item; |
|
80 |
|
|
81 |
private: |
|
82 |
const Graph& _graph; |
|
83 |
const Map& _map; |
|
84 |
|
|
85 |
public: |
|
86 |
GraphArcMapLess(const Graph& graph, const Map& map) |
|
87 |
: _graph(graph), _map(map) {} |
|
88 |
|
|
89 |
bool operator()(const Item& left, const Item& right) { |
|
90 |
return _map[_graph.direct(left, _dir)] < |
|
91 |
_map[_graph.direct(right, _dir)]; |
|
92 |
} |
|
93 |
}; |
|
94 |
|
|
74 | 95 |
template <typename _Item> |
... | ... |
@@ -112,2 +133,32 @@ |
112 | 133 |
|
134 |
template <typename _Graph, bool _dir, typename _Map, |
|
135 |
typename _Converter = DefaultConverter<typename _Map::Value> > |
|
136 |
class GraphArcMapStorage : public MapStorageBase<typename _Graph::Edge> { |
|
137 |
public: |
|
138 |
typedef _Map Map; |
|
139 |
typedef _Converter Converter; |
|
140 |
typedef _Graph Graph; |
|
141 |
typedef typename Graph::Edge Item; |
|
142 |
static const bool dir = _dir; |
|
143 |
|
|
144 |
private: |
|
145 |
const Graph& _graph; |
|
146 |
const Map& _map; |
|
147 |
Converter _converter; |
|
148 |
|
|
149 |
public: |
|
150 |
GraphArcMapStorage(const Graph& graph, const Map& map, |
|
151 |
const Converter& converter = Converter()) |
|
152 |
: _graph(graph), _map(map), _converter(converter) {} |
|
153 |
virtual ~GraphArcMapStorage() {} |
|
154 |
|
|
155 |
virtual std::string get(const Item& item) { |
|
156 |
return _converter(_map[_graph.direct(item, dir)]); |
|
157 |
} |
|
158 |
virtual void sort(std::vector<Item>& items) { |
|
159 |
GraphArcMapLess<Graph, dir, Map> less(_graph, _map); |
|
160 |
std::sort(items.begin(), items.end(), less); |
|
161 |
} |
|
162 |
}; |
|
163 |
|
|
113 | 164 |
class ValueStorageBase { |
... | ... |
@@ -156,2 +207,22 @@ |
156 | 207 |
|
208 |
template <typename Graph> |
|
209 |
struct GraphArcLookUpConverter { |
|
210 |
const Graph& _graph; |
|
211 |
const std::map<typename Graph::Edge, std::string>& _map; |
|
212 |
|
|
213 |
GraphArcLookUpConverter(const Graph& graph, |
|
214 |
const std::map<typename Graph::Edge, |
|
215 |
std::string>& map) |
|
216 |
: _graph(graph), _map(map) {} |
|
217 |
|
|
218 |
std::string operator()(const typename Graph::Arc& val) { |
|
219 |
typename std::map<typename Graph::Edge, std::string> |
|
220 |
::const_iterator it = _map.find(val); |
|
221 |
if (it == _map.end()) { |
|
222 |
throw DataFormatError("Item not found"); |
|
223 |
} |
|
224 |
return (_graph.direction(val) ? '+' : '-') + it->second; |
|
225 |
} |
|
226 |
}; |
|
227 |
|
|
157 | 228 |
bool isWhiteSpace(char c) { |
... | ... |
@@ -740,2 +811,513 @@ |
740 | 811 |
} |
812 |
|
|
813 |
/// \ingroup lemon_io |
|
814 |
/// |
|
815 |
/// \brief LGF writer for directed graphs |
|
816 |
/// |
|
817 |
/// This utility writes an \ref lgf-format "LGF" file. |
|
818 |
template <typename _Graph> |
|
819 |
class GraphWriter { |
|
820 |
public: |
|
821 |
|
|
822 |
typedef _Graph Graph; |
|
823 |
TEMPLATE_GRAPH_TYPEDEFS(Graph); |
|
824 |
|
|
825 |
private: |
|
826 |
|
|
827 |
|
|
828 |
std::ostream* _os; |
|
829 |
bool local_os; |
|
830 |
|
|
831 |
Graph& _graph; |
|
832 |
|
|
833 |
std::string _nodes_caption; |
|
834 |
std::string _edges_caption; |
|
835 |
std::string _attributes_caption; |
|
836 |
|
|
837 |
typedef std::map<Node, std::string> NodeIndex; |
|
838 |
NodeIndex _node_index; |
|
839 |
typedef std::map<Edge, std::string> EdgeIndex; |
|
840 |
EdgeIndex _edge_index; |
|
841 |
|
|
842 |
typedef std::vector<std::pair<std::string, |
|
843 |
_writer_bits::MapStorageBase<Node>* > > NodeMaps; |
|
844 |
NodeMaps _node_maps; |
|
845 |
|
|
846 |
typedef std::vector<std::pair<std::string, |
|
847 |
_writer_bits::MapStorageBase<Edge>* > >EdgeMaps; |
|
848 |
EdgeMaps _edge_maps; |
|
849 |
|
|
850 |
typedef std::vector<std::pair<std::string, |
|
851 |
_writer_bits::ValueStorageBase*> > Attributes; |
|
852 |
Attributes _attributes; |
|
853 |
|
|
854 |
bool _skip_nodes; |
|
855 |
bool _skip_edges; |
|
856 |
|
|
857 |
public: |
|
858 |
|
|
859 |
/// \brief Constructor |
|
860 |
/// |
|
861 |
/// Construct a directed graph writer, which writes to the given |
|
862 |
/// output stream. |
|
863 |
GraphWriter(std::ostream& is, Graph& graph) |
|
864 |
: _os(&is), local_os(false), _graph(graph), |
|
865 |
_skip_nodes(false), _skip_edges(false) {} |
|
866 |
|
|
867 |
/// \brief Constructor |
|
868 |
/// |
|
869 |
/// Construct a directed graph writer, which writes to the given |
|
870 |
/// output file. |
|
871 |
GraphWriter(const std::string& fn, Graph& graph) |
|
872 |
: _os(new std::ofstream(fn.c_str())), local_os(true), _graph(graph), |
|
873 |
_skip_nodes(false), _skip_edges(false) {} |
|
874 |
|
|
875 |
/// \brief Constructor |
|
876 |
/// |
|
877 |
/// Construct a directed graph writer, which writes to the given |
|
878 |
/// output file. |
|
879 |
GraphWriter(const char* fn, Graph& graph) |
|
880 |
: _os(new std::ofstream(fn)), local_os(true), _graph(graph), |
|
881 |
_skip_nodes(false), _skip_edges(false) {} |
|
882 |
|
|
883 |
/// \brief Copy constructor |
|
884 |
/// |
|
885 |
/// The copy constructor transfers all data from the other writer, |
|
886 |
/// therefore the copied writer will not be usable more. |
|
887 |
GraphWriter(GraphWriter& other) |
|
888 |
: _os(other._os), local_os(other.local_os), _graph(other._graph), |
|
889 |
_skip_nodes(other._skip_nodes), _skip_edges(other._skip_edges) { |
|
890 |
|
|
891 |
other._os = 0; |
|
892 |
other.local_os = false; |
|
893 |
|
|
894 |
_node_index.swap(other._node_index); |
|
895 |
_edge_index.swap(other._edge_index); |
|
896 |
|
|
897 |
_node_maps.swap(other._node_maps); |
|
898 |
_edge_maps.swap(other._edge_maps); |
|
899 |
_attributes.swap(other._attributes); |
|
900 |
|
|
901 |
_nodes_caption = other._nodes_caption; |
|
902 |
_edges_caption = other._edges_caption; |
|
903 |
_attributes_caption = other._attributes_caption; |
|
904 |
} |
|
905 |
|
|
906 |
/// \brief Destructor |
|
907 |
~GraphWriter() { |
|
908 |
for (typename NodeMaps::iterator it = _node_maps.begin(); |
|
909 |
it != _node_maps.end(); ++it) { |
|
910 |
delete it->second; |
|
911 |
} |
|
912 |
|
|
913 |
for (typename EdgeMaps::iterator it = _edge_maps.begin(); |
|
914 |
it != _edge_maps.end(); ++it) { |
|
915 |
delete it->second; |
|
916 |
} |
|
917 |
|
|
918 |
for (typename Attributes::iterator it = _attributes.begin(); |
|
919 |
it != _attributes.end(); ++it) { |
|
920 |
delete it->second; |
|
921 |
} |
|
922 |
|
|
923 |
if (local_os) { |
|
924 |
delete _os; |
|
925 |
} |
|
926 |
} |
|
927 |
|
|
928 |
private: |
|
929 |
|
|
930 |
GraphWriter& operator=(const GraphWriter&); |
|
931 |
|
|
932 |
public: |
|
933 |
|
|
934 |
/// \name Writing rules |
|
935 |
/// @{ |
|
936 |
|
|
937 |
/// \brief Node map reading rule |
|
938 |
/// |
|
939 |
/// Add a node map reading rule to the writer. |
|
940 |
template <typename Map> |
|
941 |
GraphWriter& nodeMap(const std::string& caption, const Map& map) { |
|
942 |
checkConcept<concepts::ReadMap<Node, typename Map::Value>, Map>(); |
|
943 |
_writer_bits::MapStorageBase<Node>* storage = |
|
944 |
new _writer_bits::MapStorage<Node, Map>(map); |
|
945 |
_node_maps.push_back(std::make_pair(caption, storage)); |
|
946 |
return *this; |
|
947 |
} |
|
948 |
|
|
949 |
/// \brief Node map writing rule |
|
950 |
/// |
|
951 |
/// Add a node map writing rule with specialized converter to the |
|
952 |
/// writer. |
|
953 |
template <typename Map, typename Converter> |
|
954 |
GraphWriter& nodeMap(const std::string& caption, const Map& map, |
|
955 |
const Converter& converter = Converter()) { |
|
956 |
checkConcept<concepts::ReadMap<Node, typename Map::Value>, Map>(); |
|
957 |
_writer_bits::MapStorageBase<Node>* storage = |
|
958 |
new _writer_bits::MapStorage<Node, Map, Converter>(map, converter); |
|
959 |
_node_maps.push_back(std::make_pair(caption, storage)); |
|
960 |
return *this; |
|
961 |
} |
|
962 |
|
|
963 |
/// \brief Edge map writing rule |
|
964 |
/// |
|
965 |
/// Add an edge map writing rule to the writer. |
|
966 |
template <typename Map> |
|
967 |
GraphWriter& edgeMap(const std::string& caption, const Map& map) { |
|
968 |
checkConcept<concepts::ReadMap<Edge, typename Map::Value>, Map>(); |
|
969 |
_writer_bits::MapStorageBase<Edge>* storage = |
|
970 |
new _writer_bits::MapStorage<Edge, Map>(map); |
|
971 |
_edge_maps.push_back(std::make_pair(caption, storage)); |
|
972 |
return *this; |
|
973 |
} |
|
974 |
|
|
975 |
/// \brief Edge map writing rule |
|
976 |
/// |
|
977 |
/// Add an edge map writing rule with specialized converter to the |
|
978 |
/// writer. |
|
979 |
template <typename Map, typename Converter> |
|
980 |
GraphWriter& edgeMap(const std::string& caption, const Map& map, |
|
981 |
const Converter& converter = Converter()) { |
|
982 |
checkConcept<concepts::ReadMap<Edge, typename Map::Value>, Map>(); |
|
983 |
_writer_bits::MapStorageBase<Edge>* storage = |
|
984 |
new _writer_bits::MapStorage<Edge, Map, Converter>(map, converter); |
|
985 |
_edge_maps.push_back(std::make_pair(caption, storage)); |
|
986 |
return *this; |
|
987 |
} |
|
988 |
|
|
989 |
/// \brief Arc map writing rule |
|
990 |
/// |
|
991 |
/// Add an arc map writing rule to the writer. |
|
992 |
template <typename Map> |
|
993 |
GraphWriter& arcMap(const std::string& caption, const Map& map) { |
|
994 |
checkConcept<concepts::ReadMap<Arc, typename Map::Value>, Map>(); |
|
995 |
_writer_bits::MapStorageBase<Edge>* forward_storage = |
|
996 |
new _writer_bits::GraphArcMapStorage<Graph, true, Map>(_graph, map); |
|
997 |
_edge_maps.push_back(std::make_pair('+' + caption, forward_storage)); |
|
998 |
_writer_bits::MapStorageBase<Edge>* backward_storage = |
|
999 |
new _writer_bits::GraphArcMapStorage<Graph, false, Map>(_graph, map); |
|
1000 |
_edge_maps.push_back(std::make_pair('-' + caption, backward_storage)); |
|
1001 |
return *this; |
|
1002 |
} |
|
1003 |
|
|
1004 |
/// \brief Arc map writing rule |
|
1005 |
/// |
|
1006 |
/// Add an arc map writing rule with specialized converter to the |
|
1007 |
/// writer. |
|
1008 |
template <typename Map, typename Converter> |
|
1009 |
GraphWriter& arcMap(const std::string& caption, const Map& map, |
|
1010 |
const Converter& converter = Converter()) { |
|
1011 |
checkConcept<concepts::ReadMap<Arc, typename Map::Value>, Map>(); |
|
1012 |
_writer_bits::MapStorageBase<Edge>* forward_storage = |
|
1013 |
new _writer_bits::GraphArcMapStorage<Graph, true, Map, Converter> |
|
1014 |
(_graph, map, converter); |
|
1015 |
_edge_maps.push_back(std::make_pair('+' + caption, forward_storage)); |
|
1016 |
_writer_bits::MapStorageBase<Edge>* backward_storage = |
|
1017 |
new _writer_bits::GraphArcMapStorage<Graph, false, Map, Converter> |
|
1018 |
(_graph, map, converter); |
|
1019 |
_edge_maps.push_back(std::make_pair('-' + caption, backward_storage)); |
|
1020 |
return *this; |
|
1021 |
} |
|
1022 |
|
|
1023 |
/// \brief Attribute writing rule |
|
1024 |
/// |
|
1025 |
/// Add an attribute writing rule to the writer. |
|
1026 |
template <typename Value> |
|
1027 |
GraphWriter& attribute(const std::string& caption, const Value& value) { |
|
1028 |
_writer_bits::ValueStorageBase* storage = |
|
1029 |
new _writer_bits::ValueStorage<Value>(value); |
|
1030 |
_attributes.push_back(std::make_pair(caption, storage)); |
|
1031 |
return *this; |
|
1032 |
} |
|
1033 |
|
|
1034 |
/// \brief Attribute writing rule |
|
1035 |
/// |
|
1036 |
/// Add an attribute writing rule with specialized converter to the |
|
1037 |
/// writer. |
|
1038 |
template <typename Value, typename Converter> |
|
1039 |
GraphWriter& attribute(const std::string& caption, const Value& value, |
|
1040 |
const Converter& converter = Converter()) { |
|
1041 |
_writer_bits::ValueStorageBase* storage = |
|
1042 |
new _writer_bits::ValueStorage<Value, Converter>(value, converter); |
|
1043 |
_attributes.push_back(std::make_pair(caption, storage)); |
|
1044 |
return *this; |
|
1045 |
} |
|
1046 |
|
|
1047 |
/// \brief Node writing rule |
|
1048 |
/// |
|
1049 |
/// Add a node writing rule to the writer. |
|
1050 |
GraphWriter& node(const std::string& caption, const Node& node) { |
|
1051 |
typedef _writer_bits::MapLookUpConverter<Node> Converter; |
|
1052 |
Converter converter(_node_index); |
|
1053 |
_writer_bits::ValueStorageBase* storage = |
|
1054 |
new _writer_bits::ValueStorage<Node, Converter>(node, converter); |
|
1055 |
_attributes.push_back(std::make_pair(caption, storage)); |
|
1056 |
return *this; |
|
1057 |
} |
|
1058 |
|
|
1059 |
/// \brief Edge writing rule |
|
1060 |
/// |
|
1061 |
/// Add an edge writing rule to writer. |
|
1062 |
GraphWriter& edge(const std::string& caption, const Edge& edge) { |
|
1063 |
typedef _writer_bits::MapLookUpConverter<Edge> Converter; |
|
1064 |
Converter converter(_edge_index); |
|
1065 |
_writer_bits::ValueStorageBase* storage = |
|
1066 |
new _writer_bits::ValueStorage<Edge, Converter>(edge, converter); |
|
1067 |
_attributes.push_back(std::make_pair(caption, storage)); |
|
1068 |
return *this; |
|
1069 |
} |
|
1070 |
|
|
1071 |
/// \brief Arc writing rule |
|
1072 |
/// |
|
1073 |
/// Add an arc writing rule to writer. |
|
1074 |
GraphWriter& arc(const std::string& caption, const Arc& arc) { |
|
1075 |
typedef _writer_bits::GraphArcLookUpConverter<Graph> Converter; |
|
1076 |
Converter converter(_graph, _edge_index); |
|
1077 |
_writer_bits::ValueStorageBase* storage = |
|
1078 |
new _writer_bits::ValueStorage<Arc, Converter>(arc, converter); |
|
1079 |
_attributes.push_back(std::make_pair(caption, storage)); |
|
1080 |
return *this; |
|
1081 |
} |
|
1082 |
|
|
1083 |
/// \name Select section by name |
|
1084 |
/// @{ |
|
1085 |
|
|
1086 |
/// \brief Set \c \@nodes section to be read |
|
1087 |
/// |
|
1088 |
/// Set \c \@nodes section to be read |
|
1089 |
GraphWriter& nodes(const std::string& caption) { |
|
1090 |
_nodes_caption = caption; |
|
1091 |
return *this; |
|
1092 |
} |
|
1093 |
|
|
1094 |
/// \brief Set \c \@edges section to be read |
|
1095 |
/// |
|
1096 |
/// Set \c \@edges section to be read |
|
1097 |
GraphWriter& edges(const std::string& caption) { |
|
1098 |
_edges_caption = caption; |
|
1099 |
return *this; |
|
1100 |
} |
|
1101 |
|
|
1102 |
/// \brief Set \c \@attributes section to be read |
|
1103 |
/// |
|
1104 |
/// Set \c \@attributes section to be read |
|
1105 |
GraphWriter& attributes(const std::string& caption) { |
|
1106 |
_attributes_caption = caption; |
|
1107 |
return *this; |
|
1108 |
} |
|
1109 |
|
|
1110 |
/// \name Skipping section |
|
1111 |
/// @{ |
|
1112 |
|
|
1113 |
/// \brief Skip writing the node set |
|
1114 |
/// |
|
1115 |
/// The \c \@nodes section will be not written to the stream. |
|
1116 |
GraphWriter& skipNodes() { |
|
1117 |
LEMON_ASSERT(!_skip_nodes, "Multiple usage of skipNodes() member"); |
|
1118 |
return *this; |
|
1119 |
} |
|
1120 |
|
|
1121 |
/// \brief Skip writing edge set |
|
1122 |
/// |
|
1123 |
/// The \c \@edges section will be not written to the stream. |
|
1124 |
GraphWriter& skipEdges() { |
|
1125 |
LEMON_ASSERT(!_skip_edges, "Multiple usage of skipEdges() member"); |
|
1126 |
return *this; |
|
1127 |
} |
|
1128 |
|
|
1129 |
/// @} |
|
1130 |
|
|
1131 |
private: |
|
1132 |
|
|
1133 |
void writeNodes() { |
|
1134 |
_writer_bits::MapStorageBase<Node>* label = 0; |
|
1135 |
for (typename NodeMaps::iterator it = _node_maps.begin(); |
|
1136 |
it != _node_maps.end(); ++it) { |
|
1137 |
if (it->first == "label") { |
|
1138 |
label = it->second; |
|
1139 |
break; |
|
1140 |
} |
|
1141 |
} |
|
1142 |
|
|
1143 |
*_os << "@nodes"; |
|
1144 |
if (!_nodes_caption.empty()) { |
|
1145 |
_writer_bits::writeToken(*_os << ' ', _nodes_caption); |
|
1146 |
} |
|
1147 |
*_os << std::endl; |
|
1148 |
|
|
1149 |
if (label == 0) { |
|
1150 |
*_os << "label" << '\t'; |
|
1151 |
} |
|
1152 |
for (typename NodeMaps::iterator it = _node_maps.begin(); |
|
1153 |
it != _node_maps.end(); ++it) { |
|
1154 |
_writer_bits::writeToken(*_os, it->first) << '\t'; |
|
1155 |
} |
|
1156 |
*_os << std::endl; |
|
1157 |
|
|
1158 |
std::vector<Node> nodes; |
|
1159 |
for (NodeIt n(_graph); n != INVALID; ++n) { |
|
1160 |
nodes.push_back(n); |
|
1161 |
} |
|
1162 |
|
|
1163 |
if (label == 0) { |
|
1164 |
IdMap<Graph, Node> id_map(_graph); |
|
1165 |
_writer_bits::MapLess<IdMap<Graph, Node> > id_less(id_map); |
|
1166 |
std::sort(nodes.begin(), nodes.end(), id_less); |
|
1167 |
} else { |
|
1168 |
label->sort(nodes); |
|
1169 |
} |
|
1170 |
|
|
1171 |
for (int i = 0; i < static_cast<int>(nodes.size()); ++i) { |
|
1172 |
Node n = nodes[i]; |
|
1173 |
if (label == 0) { |
|
1174 |
std::ostringstream os; |
|
1175 |
os << _graph.id(n); |
|
1176 |
_writer_bits::writeToken(*_os, os.str()); |
|
1177 |
*_os << '\t'; |
|
1178 |
_node_index.insert(std::make_pair(n, os.str())); |
|
1179 |
} |
|
1180 |
for (typename NodeMaps::iterator it = _node_maps.begin(); |
|
1181 |
it != _node_maps.end(); ++it) { |
|
1182 |
std::string value = it->second->get(n); |
|
1183 |
_writer_bits::writeToken(*_os, value); |
|
1184 |
if (it->first == "label") { |
|
1185 |
_node_index.insert(std::make_pair(n, value)); |
|
1186 |
} |
|
1187 |
*_os << '\t'; |
|
1188 |
} |
|
1189 |
*_os << std::endl; |
|
1190 |
} |
|
1191 |
} |
|
1192 |
|
|
1193 |
void writeEdges() { |
|
1194 |
_writer_bits::MapStorageBase<Edge>* label = 0; |
|
1195 |
for (typename EdgeMaps::iterator it = _edge_maps.begin(); |
|
1196 |
it != _edge_maps.end(); ++it) { |
|
1197 |
if (it->first == "label") { |
|
1198 |
label = it->second; |
|
1199 |
break; |
|
1200 |
} |
|
1201 |
} |
|
1202 |
|
|
1203 |
*_os << "@edges"; |
|
1204 |
if (!_edges_caption.empty()) { |
|
1205 |
_writer_bits::writeToken(*_os << ' ', _edges_caption); |
|
1206 |
} |
|
1207 |
*_os << std::endl; |
|
1208 |
|
|
1209 |
*_os << '\t' << '\t'; |
|
1210 |
if (label == 0) { |
|
1211 |
*_os << "label" << '\t'; |
|
1212 |
} |
|
1213 |
for (typename EdgeMaps::iterator it = _edge_maps.begin(); |
|
1214 |
it != _edge_maps.end(); ++it) { |
|
1215 |
_writer_bits::writeToken(*_os, it->first) << '\t'; |
|
1216 |
} |
|
1217 |
*_os << std::endl; |
|
1218 |
|
|
1219 |
std::vector<Edge> edges; |
|
1220 |
for (EdgeIt n(_graph); n != INVALID; ++n) { |
|
1221 |
edges.push_back(n); |
|
1222 |
} |
|
1223 |
|
|
1224 |
if (label == 0) { |
|
1225 |
IdMap<Graph, Edge> id_map(_graph); |
|
1226 |
_writer_bits::MapLess<IdMap<Graph, Edge> > id_less(id_map); |
|
1227 |
std::sort(edges.begin(), edges.end(), id_less); |
|
1228 |
} else { |
|
1229 |
label->sort(edges); |
|
1230 |
} |
|
1231 |
|
|
1232 |
for (int i = 0; i < static_cast<int>(edges.size()); ++i) { |
|
1233 |
Edge e = edges[i]; |
|
1234 |
_writer_bits::writeToken(*_os, _node_index. |
|
1235 |
find(_graph.u(e))->second); |
|
1236 |
*_os << '\t'; |
|
1237 |
_writer_bits::writeToken(*_os, _node_index. |
|
1238 |
find(_graph.v(e))->second); |
|
1239 |
*_os << '\t'; |
|
1240 |
if (label == 0) { |
|
1241 |
std::ostringstream os; |
|
1242 |
os << _graph.id(e); |
|
1243 |
_writer_bits::writeToken(*_os, os.str()); |
|
1244 |
*_os << '\t'; |
|
1245 |
_edge_index.insert(std::make_pair(e, os.str())); |
|
1246 |
} |
|
1247 |
for (typename EdgeMaps::iterator it = _edge_maps.begin(); |
|
1248 |
it != _edge_maps.end(); ++it) { |
|
1249 |
std::string value = it->second->get(e); |
|
1250 |
_writer_bits::writeToken(*_os, value); |
|
1251 |
if (it->first == "label") { |
|
1252 |
_edge_index.insert(std::make_pair(e, value)); |
|
1253 |
} |
|
1254 |
*_os << '\t'; |
|
1255 |
} |
|
1256 |
*_os << std::endl; |
|
1257 |
} |
|
1258 |
} |
|
1259 |
|
|
1260 |
void writeAttributes() { |
|
1261 |
if (_attributes.empty()) return; |
|
1262 |
*_os << "@attributes"; |
|
1263 |
if (!_attributes_caption.empty()) { |
|
1264 |
_writer_bits::writeToken(*_os << ' ', _attributes_caption); |
|
1265 |
} |
|
1266 |
*_os << std::endl; |
|
1267 |
for (typename Attributes::iterator it = _attributes.begin(); |
|
1268 |
it != _attributes.end(); ++it) { |
|
1269 |
_writer_bits::writeToken(*_os, it->first) << ' '; |
|
1270 |
_writer_bits::writeToken(*_os, it->second->get()); |
|
1271 |
*_os << std::endl; |
|
1272 |
} |
|
1273 |
} |
|
1274 |
|
|
1275 |
public: |
|
1276 |
|
|
1277 |
/// \name Execution of the writer |
|
1278 |
/// @{ |
|
1279 |
|
|
1280 |
/// \brief Start the batch processing |
|
1281 |
/// |
|
1282 |
/// This function starts the batch processing |
|
1283 |
void run() { |
|
1284 |
if (!_skip_nodes) { |
|
1285 |
writeNodes(); |
|
1286 |
} |
|
1287 |
if (!_skip_edges) { |
|
1288 |
writeEdges(); |
|
1289 |
} |
|
1290 |
writeAttributes(); |
|
1291 |
} |
|
1292 |
|
|
1293 |
/// \brief Gives back the stream of the writer |
|
1294 |
/// |
|
1295 |
/// Gives back the stream of the writer |
|
1296 |
std::ostream& ostream() { |
|
1297 |
return *_os; |
|
1298 |
} |
|
1299 |
|
|
1300 |
/// @} |
|
1301 |
}; |
|
1302 |
|
|
1303 |
/// \relates GraphWriter |
|
1304 |
template <typename Graph> |
|
1305 |
GraphWriter<Graph> graphWriter(std::ostream& os, Graph& graph) { |
|
1306 |
GraphWriter<Graph> tmp(os, graph); |
|
1307 |
return tmp; |
|
1308 |
} |
|
1309 |
|
|
1310 |
/// \relates GraphWriter |
|
1311 |
template <typename Graph> |
|
1312 |
GraphWriter<Graph> graphWriter(const std::string& fn, Graph& graph) { |
|
1313 |
GraphWriter<Graph> tmp(fn, graph); |
|
1314 |
return tmp; |
|
1315 |
} |
|
1316 |
|
|
1317 |
/// \relates GraphWriter |
|
1318 |
template <typename Graph> |
|
1319 |
GraphWriter<Graph> graphWriter(const char* fn, Graph& graph) { |
|
1320 |
GraphWriter<Graph> tmp(fn, graph); |
|
1321 |
return tmp; |
|
1322 |
} |
|
741 | 1323 |
} |
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