1 | /* ========================================================================= */ |
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2 | /* === AMD_preprocess ====================================================== */ |
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3 | /* ========================================================================= */ |
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4 | |
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5 | /* ------------------------------------------------------------------------- */ |
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6 | /* AMD, Copyright (c) Timothy A. Davis, */ |
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7 | /* Patrick R. Amestoy, and Iain S. Duff. See ../README.txt for License. */ |
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8 | /* email: davis at cise.ufl.edu CISE Department, Univ. of Florida. */ |
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9 | /* web: http://www.cise.ufl.edu/research/sparse/amd */ |
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10 | /* ------------------------------------------------------------------------- */ |
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11 | |
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12 | /* Sorts, removes duplicate entries, and transposes from the nonzero pattern of |
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13 | * a column-form matrix A, to obtain the matrix R. The input matrix can have |
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14 | * duplicate entries and/or unsorted columns (AMD_valid (n,Ap,Ai) must not be |
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15 | * AMD_INVALID). |
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16 | * |
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17 | * This input condition is NOT checked. This routine is not user-callable. |
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18 | */ |
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19 | |
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20 | #include "amd_internal.h" |
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21 | |
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22 | /* ========================================================================= */ |
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23 | /* === AMD_preprocess ====================================================== */ |
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24 | /* ========================================================================= */ |
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25 | |
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26 | /* AMD_preprocess does not check its input for errors or allocate workspace. |
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27 | * On input, the condition (AMD_valid (n,n,Ap,Ai) != AMD_INVALID) must hold. |
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28 | */ |
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29 | |
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30 | GLOBAL void AMD_preprocess |
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31 | ( |
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32 | Int n, /* input matrix: A is n-by-n */ |
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33 | const Int Ap [ ], /* size n+1 */ |
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34 | const Int Ai [ ], /* size nz = Ap [n] */ |
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35 | |
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36 | /* output matrix R: */ |
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37 | Int Rp [ ], /* size n+1 */ |
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38 | Int Ri [ ], /* size nz (or less, if duplicates present) */ |
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39 | |
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40 | Int W [ ], /* workspace of size n */ |
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41 | Int Flag [ ] /* workspace of size n */ |
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42 | ) |
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43 | { |
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44 | |
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45 | /* --------------------------------------------------------------------- */ |
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46 | /* local variables */ |
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47 | /* --------------------------------------------------------------------- */ |
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48 | |
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49 | Int i, j, p, p2 ; |
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50 | |
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51 | ASSERT (AMD_valid (n, n, Ap, Ai) != AMD_INVALID) ; |
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52 | |
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53 | /* --------------------------------------------------------------------- */ |
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54 | /* count the entries in each row of A (excluding duplicates) */ |
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55 | /* --------------------------------------------------------------------- */ |
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56 | |
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57 | for (i = 0 ; i < n ; i++) |
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58 | { |
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59 | W [i] = 0 ; /* # of nonzeros in row i (excl duplicates) */ |
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60 | Flag [i] = EMPTY ; /* Flag [i] = j if i appears in column j */ |
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61 | } |
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62 | for (j = 0 ; j < n ; j++) |
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63 | { |
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64 | p2 = Ap [j+1] ; |
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65 | for (p = Ap [j] ; p < p2 ; p++) |
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66 | { |
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67 | i = Ai [p] ; |
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68 | if (Flag [i] != j) |
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69 | { |
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70 | /* row index i has not yet appeared in column j */ |
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71 | W [i]++ ; /* one more entry in row i */ |
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72 | Flag [i] = j ; /* flag row index i as appearing in col j*/ |
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73 | } |
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74 | } |
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75 | } |
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76 | |
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77 | /* --------------------------------------------------------------------- */ |
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78 | /* compute the row pointers for R */ |
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79 | /* --------------------------------------------------------------------- */ |
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80 | |
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81 | Rp [0] = 0 ; |
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82 | for (i = 0 ; i < n ; i++) |
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83 | { |
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84 | Rp [i+1] = Rp [i] + W [i] ; |
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85 | } |
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86 | for (i = 0 ; i < n ; i++) |
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87 | { |
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88 | W [i] = Rp [i] ; |
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89 | Flag [i] = EMPTY ; |
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90 | } |
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91 | |
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92 | /* --------------------------------------------------------------------- */ |
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93 | /* construct the row form matrix R */ |
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94 | /* --------------------------------------------------------------------- */ |
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95 | |
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96 | /* R = row form of pattern of A */ |
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97 | for (j = 0 ; j < n ; j++) |
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98 | { |
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99 | p2 = Ap [j+1] ; |
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100 | for (p = Ap [j] ; p < p2 ; p++) |
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101 | { |
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102 | i = Ai [p] ; |
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103 | if (Flag [i] != j) |
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104 | { |
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105 | /* row index i has not yet appeared in column j */ |
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106 | Ri [W [i]++] = j ; /* put col j in row i */ |
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107 | Flag [i] = j ; /* flag row index i as appearing in col j*/ |
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108 | } |
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109 | } |
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110 | } |
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111 | |
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112 | #ifndef NDEBUG |
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113 | ASSERT (AMD_valid (n, n, Rp, Ri) == AMD_OK) ; |
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114 | for (j = 0 ; j < n ; j++) |
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115 | { |
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116 | ASSERT (W [j] == Rp [j+1]) ; |
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117 | } |
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118 | #endif |
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119 | } |
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